RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 SMIM12Q96EX1 92 aa14.25□□□□□ -0.13
CROCCP3-201ENST00000263511 SPTBP11277 2137 aa14.25□□□□□ -0.13
CROCCP3-201ENST00000263511 RBBP6Q7Z6E9 1792 aaKnown RBP14.24□□□□□ -0.13
CROCCP3-201ENST00000263511 TMEM238LA0A1B0GVL6 79 aa14.24□□□□□ -0.13
CROCCP3-201ENST00000263511 A6NJY4 79 aa14.24□□□□□ -0.13
CROCCP3-201ENST00000263511 ZNF56Q15929 161 aa14.24□□□□□ -0.13
CROCCP3-201ENST00000263511 ZNF418Q8TF45 676 aaPredicted RBP14.24□□□□□ -0.13
CROCCP3-201ENST00000263511 PSMG3Q9BT73 122 aaPredicted RBP14.24□□□□□ -0.13
CROCCP3-201ENST00000263511 IFI27L2Q9H2X8 130 aa14.24□□□□□ -0.13
CROCCP3-201ENST00000263511 IGHV3OR16-13A0A075B7E8 117 aa14.24□□□□□ -0.13
CROCCP3-201ENST00000263511 IGHV3-74A0A0B4J1X5 117 aa14.24□□□□□ -0.13
CROCCP3-201ENST00000263511 NHLRC3Q5JS37 347 aa14.24□□□□□ -0.13
CROCCP3-201ENST00000263511 LAIR2Q6ISS4 152 aa14.24□□□□□ -0.13
CROCCP3-201ENST00000263511 PPP1R27Q86WC6 154 aa14.24□□□□□ -0.13
CROCCP3-201ENST00000263511 H3BVH4 76 aa14.24□□□□□ -0.13
CROCCP3-201ENST00000263511 RND3P61587 244 aa14.24□□□□□ -0.13
CROCCP3-201ENST00000263511 FAM74A4Q5TZK3 123 aa14.24□□□□□ -0.13
CROCCP3-201ENST00000263511 GCHFRP30047 84 aa14.24□□□□□ -0.13
CROCCP3-201ENST00000263511 TUBA4BQ9H853 241 aa14.24□□□□□ -0.13
CROCCP3-201ENST00000263511 A0A0B4J293 547 aa14.23□□□□□ -0.13
CROCCP3-201ENST00000263511 FOXI3A8MTJ6 420 aaPredicted RBP14.23□□□□□ -0.13
CROCCP3-201ENST00000263511 PRSS8Q16651 343 aa14.23□□□□□ -0.13
CROCCP3-201ENST00000263511 HSPB9Q9BQS6 159 aa14.23□□□□□ -0.13
CROCCP3-201ENST00000263511 IGKV3-20P01619 116 aa14.23□□□□□ -0.13
CROCCP3-201ENST00000263511 PLAURQ03405 335 aa14.23□□□□□ -0.13
CROCCP3-201ENST00000263511 SH3BGRL3Q9H299 93 aa14.23□□□□□ -0.13
CROCCP3-201ENST00000263511 COX6CP09669 75 aa14.23□□□□□ -0.13
CROCCP3-201ENST00000263511 DANCRP0C864 163 aa14.23□□□□□ -0.13
CROCCP3-201ENST00000263511 AGAP20933 346 aa14.23□□□□□ -0.13
CROCCP3-201ENST00000263511 ADIPOQQ15848 244 aa14.23□□□□□ -0.13
CROCCP3-201ENST00000263511 ZIC4Q8N9L1 334 aa14.23□□□□□ -0.13
CROCCP3-201ENST00000263511 CEP250Q9BV73 2442 aa14.23□□□□□ -0.13
CROCCP3-201ENST00000263511 H0YL77 283 aa14.23□□□□□ -0.13
CROCCP3-201ENST00000263511 LEPROTL1O95214 131 aa14.23□□□□□ -0.13
CROCCP3-201ENST00000263511 ZNF837Q96EG3 531 aaPredicted RBP14.23□□□□□ -0.13
CROCCP3-201ENST00000263511 GGACTQ9BVM4 153 aa14.23□□□□□ -0.13
CROCCP3-201ENST00000263511 C21orf62Q9NYP8 219 aa14.23□□□□□ -0.13
CROCCP3-201ENST00000263511 LOC105371267A0A1B0GV96 52 aa14.23□□□□□ -0.13
CROCCP3-201ENST00000263511 C2orf68Q2NKX9 166 aa14.23□□□□□ -0.13
CROCCP3-201ENST00000263511 OR4A47Q6IF82 309 aa14.23□□□□□ -0.13
CROCCP3-201ENST00000263511 ARPC1AQ92747 370 aa14.23□□□□□ -0.13
CROCCP3-201ENST00000263511 SGK494Q96LW2 274 aa14.23□□□□□ -0.13
CROCCP3-201ENST00000263511 KIR2DL4Q99706 377 aa14.23□□□□□ -0.13
CROCCP3-201ENST00000263511 MRPL18Q9H0U6 180 aaKnown RBP14.23□□□□□ -0.13
CROCCP3-201ENST00000263511 EIF3GO75821 320 aaKnown RBP eCLIP14.22□□□□□ -0.13
CROCCP3-201ENST00000263511 CDKN1AP38936 164 aa14.22□□□□□ -0.13
CROCCP3-201ENST00000263511 RRHO14718 337 aa14.22□□□□□ -0.13
CROCCP3-201ENST00000263511 CELA3BP08861 270 aa14.22□□□□□ -0.13
CROCCP3-201ENST00000263511 IL6RP08887 468 aaPredicted RBP14.22□□□□□ -0.13
CROCCP3-201ENST00000263511 TCTAP57738 103 aa14.22□□□□□ -0.13
CROCCP3-201ENST00000263511 YAE1D1Q9NRH1 226 aa14.22□□□□□ -0.13
CROCCP3-201ENST00000263511 TCF21O43680 179 aa14.22□□□□□ -0.13
CROCCP3-201ENST00000263511 MBNL2Q5VZF2 373 aaKnown RBP14.22□□□□□ -0.13
CROCCP3-201ENST00000263511 NEU1Q99519 415 aa14.22□□□□□ -0.13
CROCCP3-201ENST00000263511 CBLN4Q9NTU7 201 aa14.22□□□□□ -0.13
CROCCP3-201ENST00000263511 WDR90Q96KV7 1748 aa14.22□□□□□ -0.13
CROCCP3-201ENST00000263511 TRGC2P03986 189 aa14.22□□□□□ -0.13
CROCCP3-201ENST00000263511 PLSCR2Q9NRY7 297 aa14.22□□□□□ -0.13
CROCCP3-201ENST00000263511 ABCA7Q8IZY2 2146 aa14.21□□□□□ -0.13
CROCCP3-201ENST00000263511 MPTX1A8MV57 137 aa14.21□□□□□ -0.13
CROCCP3-201ENST00000263511 CEACAM4O75871 244 aa14.21□□□□□ -0.13
CROCCP3-201ENST00000263511 PAPPA-AS1Q5QFB9 102 aa14.21□□□□□ -0.13
CROCCP3-201ENST00000263511 HIST1H2BAQ96A08 127 aa14.21□□□□□ -0.13
CROCCP3-201ENST00000263511 RTTNQ86VV8 2226 aa14.21□□□□□ -0.13
CROCCP3-201ENST00000263511 SPACA3Q8IXA5 215 aa14.21□□□□□ -0.13
CROCCP3-201ENST00000263511 RARRES2Q99969 163 aa14.21□□□□□ -0.13
CROCCP3-201ENST00000263511 IGHV3-23P01764 117 aa14.21□□□□□ -0.13
CROCCP3-201ENST00000263511 ICAM4Q14773 271 aa14.21□□□□□ -0.13
CROCCP3-201ENST00000263511 C17orf98A8MV24 154 aa14.21□□□□□ -0.14
CROCCP3-201ENST00000263511 FOXA2Q9Y261 457 aaPredicted RBP14.21□□□□□ -0.14
CROCCP3-201ENST00000263511 E9PLN8 166 aa14.2□□□□□ -0.14
CROCCP3-201ENST00000263511 ZNF385CQ66K41 422 aaPredicted RBP14.2□□□□□ -0.14
CROCCP3-201ENST00000263511 VKORC1Q9BQB6 163 aa14.2□□□□□ -0.14
CROCCP3-201ENST00000263511 TMEM70Q9BUB7 260 aa14.2□□□□□ -0.14
CROCCP3-201ENST00000263511 MRPL20Q9BYC9 149 aaKnown RBP14.2□□□□□ -0.14
CROCCP3-201ENST00000263511 PARLQ9H300 379 aa14.2□□□□□ -0.14
CROCCP3-201ENST00000263511 UCP1P25874 307 aa14.2□□□□□ -0.14
CROCCP3-201ENST00000263511 IGLV3-32A0A0A0MS00 114 aa14.2□□□□□ -0.14
CROCCP3-201ENST00000263511 CRIPAKQ8N1N5 446 aa14.2□□□□□ -0.14
CROCCP3-201ENST00000263511 NTN3O00634 580 aaPredicted RBP14.2□□□□□ -0.14
CROCCP3-201ENST00000263511 NBEAP1P0C6P0 100 aa14.2□□□□□ -0.14
CROCCP3-201ENST00000263511 CD59P13987 128 aa14.2□□□□□ -0.14
CROCCP3-201ENST00000263511 SEMA5BQ9P283 1151 aa14.2□□□□□ -0.14
CROCCP3-201ENST00000263511 CNOT1A5YKK6 2376 aaKnown RBP14.2□□□□□ -0.14
CROCCP3-201ENST00000263511 IGHV3-49A0A0A0MS15 119 aa14.19□□□□□ -0.14
CROCCP3-201ENST00000263511 PQLC2LA1A4F0 135 aa14.19□□□□□ -0.14
CROCCP3-201ENST00000263511 CIRBPQ14011 172 aaKnown RBP14.19□□□□□ -0.14
CROCCP3-201ENST00000263511 PMCHL1Q16048 86 aa14.19□□□□□ -0.14
CROCCP3-201ENST00000263511 COL5A1-AS1Q5SY13 56 aa14.19□□□□□ -0.14
CROCCP3-201ENST00000263511 DPH3Q96FX2 82 aa14.19□□□□□ -0.14
CROCCP3-201ENST00000263511 A0A0G2JK05 382 aa14.19□□□□□ -0.14
CROCCP3-201ENST00000263511 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.19□□□□□ -0.14
CROCCP3-201ENST00000263511 PROB1E7EW31 1015 aa14.19□□□□□ -0.14
CROCCP3-201ENST00000263511 LGALS3P17931 250 aaKnown RBP14.19□□□□□ -0.14
CROCCP3-201ENST00000263511 GPR183P32249 361 aa14.19□□□□□ -0.14
CROCCP3-201ENST00000263511 CFHR1Q03591 330 aa14.19□□□□□ -0.14
CROCCP3-201ENST00000263511 COPS9Q8WXC6 57 aa14.19□□□□□ -0.14
CROCCP3-201ENST00000263511 SDHCQ99643 169 aaPredicted RBP14.19□□□□□ -0.14
CROCCP3-201ENST00000263511 TET1Q8NFU7 2136 aa14.19□□□□□ -0.14
CROCCP3-201ENST00000263511 CXorf65A6NEN9 183 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms