RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 ZNF226Q9NYT6 803 aa2.77□□□□□ -1.97
CCDC54-201ENST00000261058 MTFP1Q9UDX5 166 aa2.77□□□□□ -1.97
CCDC54-201ENST00000261058 HIGD1AQ9Y241 93 aa2.77□□□□□ -1.97
CCDC54-201ENST00000261058 DICER1Q9UPY3 1922 aaKnown RBP2.77□□□□□ -1.97
CCDC54-201ENST00000261058 ABCC5O15440 1437 aa2.77□□□□□ -1.97
CCDC54-201ENST00000261058 PHIPQ8WWQ0 1821 aa2.77□□□□□ -1.97
CCDC54-201ENST00000261058 GRIN2AQ12879 1464 aa2.77□□□□□ -1.97
CCDC54-201ENST00000261058 BAZ2AQ9UIF9 1905 aaKnown RBP2.77□□□□□ -1.97
CCDC54-201ENST00000261058 MYO10Q9HD67 2058 aa2.77□□□□□ -1.97
CCDC54-201ENST00000261058 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.76□□□□□ -1.97
CCDC54-201ENST00000261058 TRAV8-6A0A0B4J262 113 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 A0A0G2JMM0 328 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 A0A1W2PPB8 328 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 DUXBA0A1W2PPF3 345 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 RBFOX3A6NFN3 312 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 BTNL10A8MVZ5 291 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 KIR3DP1A8MWS1 328 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 EEF1E1-BLOC1S5C9J1V9 151 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 G3V3Q6 166 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 K7EPK0 472 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 XKRYO14609 159 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 EEF1E1O43324 174 aaKnown RBP2.76□□□□□ -1.97
CCDC54-201ENST00000261058 PDCD6O75340 191 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 YIF1AO95070 293 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 NDUFC2O95298 119 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 OR2H2O95918 312 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 IGLV2-23P01705 113 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 PRB2P02812 416 aaPredicted RBP2.76□□□□□ -1.97
CCDC54-201ENST00000261058 IGKV5-2P06315 115 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 HIST1H1DP16402 221 aaKnown RBP2.76□□□□□ -1.97
CCDC54-201ENST00000261058 CSRP1P21291 193 aaKnown RBP2.76□□□□□ -1.97
CCDC54-201ENST00000261058 CNTFRP26992 372 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 CXCL12P48061 93 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 NMUP48645 174 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 PSMB2P49721 201 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 POLR2HP52434 150 aaKnown RBP2.76□□□□□ -1.97
CCDC54-201ENST00000261058 AQP4P55087 323 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 RPS23P62266 143 aaKnown RBP2.76□□□□□ -1.97
CCDC54-201ENST00000261058 REG3AQ06141 175 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 LAMTOR4Q0VGL1 99 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 PAFAH1B3Q15102 231 aaKnown RBP2.76□□□□□ -1.97
CCDC54-201ENST00000261058 TCEAL5Q5H9L2 206 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 SPANXN3Q5MJ09 141 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 BCL2L15Q5TBC7 163 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 TSPO2Q5TGU0 170 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 GLIPR1L1Q6UWM5 242 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 LYPD2Q6UXB3 125 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 ZNF705AQ6ZN79 300 aaPredicted RBP2.76□□□□□ -1.97
CCDC54-201ENST00000261058 DGAT2L6Q6ZPD8 337 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 NEGR1Q7Z3B1 354 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 C20orf196Q8IYI0 205 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 C5orf17Q8NAS9 161 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.76□□□□□ -1.97
CCDC54-201ENST00000261058 GPR26Q8NDV2 337 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 PLPP5Q8NEB5 264 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 OR51T1Q8NGJ9 327 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 C15orf40Q8WUR7 153 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 PLEKHB2Q96CS7 222 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 SLAMF6Q96DU3 332 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 DERL3Q96Q80 235 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 RTBDNQ9BSG5 229 aaPredicted RBP2.76□□□□□ -1.97
CCDC54-201ENST00000261058 DERL1Q9BUN8 251 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 SPANXDQ9BXN6 97 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 RNASE7Q9H1E1 156 aaKnown RBP2.76□□□□□ -1.97
CCDC54-201ENST00000261058 RERGLQ9H628 205 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 PRTFDC1Q9NRG1 225 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 HEBP1Q9NRV9 189 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 CBLN4Q9NTU7 201 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 ZNF586Q9NXT0 402 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 BET1LQ9NYM9 111 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 CYSLTR1Q9Y271 337 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 F11RQ9Y624 299 aaKnown RBP2.76□□□□□ -1.97
CCDC54-201ENST00000261058 CACNA1SQ13698 1873 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 KMT2EQ8IZD2 1858 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 NPHP4O75161 1426 aaPredicted RBP2.76□□□□□ -1.97
CCDC54-201ENST00000261058 BCL9LQ86UU0 1499 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 ZFYVE16Q7Z3T8 1539 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 UGGT2Q9NYU1 1516 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 A0A0J9YXV3 536 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 LOC100130705A0A1B0GUX0 176 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 hADV38S2A0JD32 116 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 MEIS3P1A6NDR6 274 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 CDC42EP2O14613 210 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 NDUFS5O43920 106 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 SS18L1O75177 396 aaPredicted RBP2.76□□□□□ -1.97
CCDC54-201ENST00000261058 EPPINO95925 133 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 NMBP08949 121 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 OR12D1P0DN82 309 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 GZMBP10144 247 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 NTF3P20783 257 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 MARCKSL1P49006 195 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 NDUFA6P56556 154 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 SNRPD2P62316 118 aaKnown RBP2.76□□□□□ -1.97
CCDC54-201ENST00000261058 UBA52P62987 128 aaKnown RBP2.76□□□□□ -1.97
CCDC54-201ENST00000261058 MEF2CQ06413 473 aaPredicted RBP2.76□□□□□ -1.97
CCDC54-201ENST00000261058 PMAIP1Q13794 54 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 RSPO1Q2MKA7 263 aaPredicted RBP2.76□□□□□ -1.97
CCDC54-201ENST00000261058 GLYATL3Q5SZD4 288 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 ZNF684Q5T5D7 378 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 SPATA31B1PQ5VZV4 182 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms