RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 KAAG1Q9UBP8 84 aa14.4□□□□□ -0.1
SSB-201ENST00000260956 PPIAL4AQ9Y536 164 aa14.4□□□□□ -0.1
SSB-201ENST00000260956 ZNF469Q96JG9 3925 aaPredicted RBP14.4□□□□□ -0.1
SSB-201ENST00000260956 CREBBPQ92793 2442 aa14.39□□□□□ -0.11
SSB-201ENST00000260956 FGF7P21781 194 aa14.39□□□□□ -0.11
SSB-201ENST00000260956 AKR1C3P42330 323 aa14.39□□□□□ -0.11
SSB-201ENST00000260956 GNG10P50151 68 aa14.39□□□□□ -0.11
SSB-201ENST00000260956 RPS16P62249 146 aaKnown RBP14.39□□□□□ -0.11
SSB-201ENST00000260956 FLI1Q01543 452 aaPredicted RBP14.39□□□□□ -0.11
SSB-201ENST00000260956 FAM90A2PQ658T7 463 aa14.39□□□□□ -0.11
SSB-201ENST00000260956 LYPD2Q6UXB3 125 aa14.39□□□□□ -0.11
SSB-201ENST00000260956 RHOVQ96L33 236 aa14.39□□□□□ -0.11
SSB-201ENST00000260956 UBTD1Q9HAC8 227 aa14.39□□□□□ -0.11
SSB-201ENST00000260956 MAP1LC3B2A6NCE7 125 aa14.38□□□□□ -0.11
SSB-201ENST00000260956 FBP1P09467 338 aa14.38□□□□□ -0.11
SSB-201ENST00000260956 ELLP55199 621 aaPredicted RBP14.38□□□□□ -0.11
SSB-201ENST00000260956 ZNF672Q499Z4 452 aaPredicted RBP14.38□□□□□ -0.11
SSB-201ENST00000260956 TMEM200BQ69YZ2 307 aa14.38□□□□□ -0.11
SSB-201ENST00000260956 LCN15Q6UWW0 184 aa14.38□□□□□ -0.11
SSB-201ENST00000260956 C15orf54Q8N8G6 183 aa14.38□□□□□ -0.11
SSB-201ENST00000260956 OR4A16Q8NH70 328 aa14.38□□□□□ -0.11
SSB-201ENST00000260956 MAP1LC3BQ9GZQ8 125 aa14.38□□□□□ -0.11
SSB-201ENST00000260956 RRHO14718 337 aa14.38□□□□□ -0.11
SSB-201ENST00000260956 CCL3L1P16619 93 aa14.38□□□□□ -0.11
SSB-201ENST00000260956 CTRB1P17538 263 aa14.38□□□□□ -0.11
SSB-201ENST00000260956 NDUFB7P17568 137 aa14.38□□□□□ -0.11
SSB-201ENST00000260956 ERVFRD-1P60508 538 aa14.38□□□□□ -0.11
SSB-201ENST00000260956 RPL31P62899 125 aaKnown RBP14.38□□□□□ -0.11
SSB-201ENST00000260956 CTRB2Q6GPI1 263 aa14.38□□□□□ -0.11
SSB-201ENST00000260956 FAM122CQ6P4D5 195 aa14.38□□□□□ -0.11
SSB-201ENST00000260956 C8orf31Q8N9H6 132 aa14.38□□□□□ -0.11
SSB-201ENST00000260956 HIST1H2BAQ96A08 127 aa14.38□□□□□ -0.11
SSB-201ENST00000260956 C1orf159Q96HA4 380 aa14.38□□□□□ -0.11
SSB-201ENST00000260956 GAL3ST2Q9H3Q3 398 aa14.38□□□□□ -0.11
SSB-201ENST00000260956 RBMXL2O75526 392 aaKnown RBP14.37□□□□□ -0.11
SSB-201ENST00000260956 IFNA17P01571 189 aa14.37□□□□□ -0.11
SSB-201ENST00000260956 SNRNP70P08621 437 aaKnown RBP14.37□□□□□ -0.11
SSB-201ENST00000260956 DAOP14920 347 aa14.37□□□□□ -0.11
SSB-201ENST00000260956 APOBEC3AP31941 199 aaPredicted RBP14.37□□□□□ -0.11
SSB-201ENST00000260956 MAS1LP35410 378 aa14.37□□□□□ -0.11
SSB-201ENST00000260956 FGF8P55075 233 aaPredicted RBP14.37□□□□□ -0.11
SSB-201ENST00000260956 IGFBPL1Q8WX77 278 aa14.37□□□□□ -0.11
SSB-201ENST00000260956 C20orf24Q9BUV8 137 aa14.37□□□□□ -0.11
SSB-201ENST00000260956 GGACTQ9BVM4 153 aa14.37□□□□□ -0.11
SSB-201ENST00000260956 UNKLQ9H9P5 680 aaKnown RBP14.37□□□□□ -0.11
SSB-201ENST00000260956 RPS10P5Q9NQ39 176 aa14.37□□□□□ -0.11
SSB-201ENST00000260956 GNG13Q9P2W3 67 aa14.37□□□□□ -0.11
SSB-201ENST00000260956 YLPM1P49750 1951 aaKnown RBP14.36□□□□□ -0.11
SSB-201ENST00000260956 A0A087X0M5 115 aa14.36□□□□□ -0.11
SSB-201ENST00000260956 CTXND1A0A1B0GTU2 59 aa14.36□□□□□ -0.11
SSB-201ENST00000260956 A0A1B0GX30 115 aa14.36□□□□□ -0.11
SSB-201ENST00000260956 B9A039 149 aa14.36□□□□□ -0.11
SSB-201ENST00000260956 H3BQ15 152 aa14.36□□□□□ -0.11
SSB-201ENST00000260956 SOD3P08294 240 aa14.36□□□□□ -0.11
SSB-201ENST00000260956 LINC00311Q8N616 119 aa14.36□□□□□ -0.11
SSB-201ENST00000260956 ZNF714Q96N38 554 aa14.36□□□□□ -0.11
SSB-201ENST00000260956 SRRM4A7MD48 611 aaKnown RBP14.35□□□□□ -0.11
SSB-201ENST00000260956 SEC14L6B5MCN3 397 aa14.35□□□□□ -0.11
SSB-201ENST00000260956 NDUFS6O75380 124 aaKnown RBP14.35□□□□□ -0.11
SSB-201ENST00000260956 IGKV1-16P04430 117 aa14.35□□□□□ -0.11
SSB-201ENST00000260956 CRYBA1P05813 215 aa14.35□□□□□ -0.11
SSB-201ENST00000260956 ZNF137PP52743 207 aa14.35□□□□□ -0.11
SSB-201ENST00000260956 DLK1P80370 383 aa14.35□□□□□ -0.11
SSB-201ENST00000260956 TMEM155Q4W5P6 130 aa14.35□□□□□ -0.11
SSB-201ENST00000260956 CCL17Q92583 94 aa14.35□□□□□ -0.11
SSB-201ENST00000260956 MS4A5Q9H3V2 200 aa14.35□□□□□ -0.11
SSB-201ENST00000260956 LSM4Q9Y4Z0 139 aaKnown RBP14.35□□□□□ -0.11
SSB-201ENST00000260956 VSTM5A8MXK1 200 aa14.35□□□□□ -0.11
SSB-201ENST00000260956 H7C2Y5 167 aa14.35□□□□□ -0.11
SSB-201ENST00000260956 M0R036 132 aa14.35□□□□□ -0.11
SSB-201ENST00000260956 EIF3GO75821 320 aaKnown RBP eCLIP14.35□□□□□ -0.114e-7■■□□□ 13
SSB-201ENST00000260956 FSTL3O95633 263 aa14.35□□□□□ -0.11
SSB-201ENST00000260956 HSPE1P61604 102 aaKnown RBP14.35□□□□□ -0.11
SSB-201ENST00000260956 FFAR4Q5NUL3 377 aa14.35□□□□□ -0.11
SSB-201ENST00000260956 C11orf42Q8N5U0 333 aa14.35□□□□□ -0.11
SSB-201ENST00000260956 ST6GALNAC6Q969X2 333 aa14.35□□□□□ -0.11
SSB-201ENST00000260956 RAB39BQ96DA2 213 aa14.35□□□□□ -0.11
SSB-201ENST00000260956 MRPL20Q9BYC9 149 aaKnown RBP14.35□□□□□ -0.11
SSB-201ENST00000260956 DYNLRB1Q9NP97 96 aa14.35□□□□□ -0.11
SSB-201ENST00000260956 ITPR3Q14573 2671 aa14.35□□□□□ -0.11
SSB-201ENST00000260956 UPK2O00526 184 aa14.34□□□□□ -0.11
SSB-201ENST00000260956 MBP02144 154 aa14.34□□□□□ -0.11
SSB-201ENST00000260956 CD1BP29016 333 aa14.34□□□□□ -0.11
SSB-201ENST00000260956 TMEM249Q2WGJ8 235 aa14.34□□□□□ -0.11
SSB-201ENST00000260956 FAM71F2Q6NXP2 309 aa14.34□□□□□ -0.11
SSB-201ENST00000260956 TREML4Q6UXN2 200 aa14.34□□□□□ -0.11
SSB-201ENST00000260956 SLC35E3Q7Z769 313 aa14.34□□□□□ -0.11
SSB-201ENST00000260956 OR5AN1Q8NGI8 311 aa14.34□□□□□ -0.11
SSB-201ENST00000260956 P2RX4Q99571 388 aa14.34□□□□□ -0.11
SSB-201ENST00000260956 SLC25A22Q9H936 323 aa14.34□□□□□ -0.11
SSB-201ENST00000260956 SLC35D1Q9NTN3 355 aa14.34□□□□□ -0.11
SSB-201ENST00000260956 ZNF257Q9Y2Q1 563 aa14.34□□□□□ -0.11
SSB-201ENST00000260956 TNCP24821 2201 aa14.34□□□□□ -0.11
SSB-201ENST00000260956 A0A087WWC5 75 aa14.33□□□□□ -0.12
SSB-201ENST00000260956 H0YJW9 148 aa14.33□□□□□ -0.12
SSB-201ENST00000260956 DVL1O14640 695 aa14.33□□□□□ -0.12
SSB-201ENST00000260956 YIF1AO95070 293 aa14.33□□□□□ -0.12
SSB-201ENST00000260956 HRASP01112 189 aa14.33□□□□□ -0.12
SSB-201ENST00000260956 MYOD1P15172 320 aa14.33□□□□□ -0.12
SSB-201ENST00000260956 BSXQ3C1V8 233 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms