RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 NCMAPQ5T1S8 102 aa12.96□□□□□ -0.33
RFX1-201ENST00000254325 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.96□□□□□ -0.33
RFX1-201ENST00000254325 CNIH1O95406 144 aa12.96□□□□□ -0.33
RFX1-201ENST00000254325 RPL8P62917 257 aaKnown RBP12.96□□□□□ -0.33
RFX1-201ENST00000254325 GCSAMLQ5JQS6 135 aa12.96□□□□□ -0.33
RFX1-201ENST00000254325 RPEQ96AT9 228 aa12.96□□□□□ -0.33
RFX1-201ENST00000254325 C15orf62A8K5M9 175 aa12.96□□□□□ -0.34
RFX1-201ENST00000254325 CXorf1O96002 111 aa12.96□□□□□ -0.34
RFX1-201ENST00000254325 PRRX1P54821 245 aa12.96□□□□□ -0.34
RFX1-201ENST00000254325 C17orf58Q2M2W7 97 aa12.96□□□□□ -0.34
RFX1-201ENST00000254325 WDR83OSQ9Y284 106 aa12.96□□□□□ -0.34
RFX1-201ENST00000254325 B9A039 149 aa12.95□□□□□ -0.34
RFX1-201ENST00000254325 RELBQ01201 579 aa12.95□□□□□ -0.34
RFX1-201ENST00000254325 HES1Q14469 280 aa12.95□□□□□ -0.34
RFX1-201ENST00000254325 ODF3L1Q8IXM7 274 aa12.95□□□□□ -0.34
RFX1-201ENST00000254325 ZNF383Q8NA42 475 aa12.95□□□□□ -0.34
RFX1-201ENST00000254325 PARLQ9H300 379 aa12.95□□□□□ -0.34
RFX1-201ENST00000254325 SERTAD4Q9NUC0 356 aa12.95□□□□□ -0.34
RFX1-201ENST00000254325 DOK5Q9P104 306 aa12.95□□□□□ -0.34
RFX1-201ENST00000254325 ZNRD1Q9P1U0 126 aa12.95□□□□□ -0.34
RFX1-201ENST00000254325 CEP295Q9C0D2 2601 aa12.95□□□□□ -0.34
RFX1-201ENST00000254325 FAM90A9PA6NNJ1 464 aa12.95□□□□□ -0.34
RFX1-201ENST00000254325 MUC15Q8N387 334 aa12.95□□□□□ -0.34
RFX1-201ENST00000254325 FAM216AQ8WUB2 273 aa12.95□□□□□ -0.34
RFX1-201ENST00000254325 NEUROG1Q92886 237 aa12.95□□□□□ -0.34
RFX1-201ENST00000254325 VKORC1Q9BQB6 163 aa12.95□□□□□ -0.34
RFX1-201ENST00000254325 PTPRQQ9UMZ3 2332 aa12.95□□□□□ -0.34
RFX1-201ENST00000254325 K7ENP7 123 aa12.95□□□□□ -0.34
RFX1-201ENST00000254325 LOXL3P58215 753 aa12.95□□□□□ -0.34
RFX1-201ENST00000254325 SSX3Q99909 188 aa12.95□□□□□ -0.34
RFX1-201ENST00000254325 CTDSP1Q9GZU7 261 aa12.95□□□□□ -0.34
RFX1-201ENST00000254325 ARL14EPLP0DKL9 152 aa12.94□□□□□ -0.34
RFX1-201ENST00000254325 MDKP21741 143 aaPredicted RBP12.94□□□□□ -0.34
RFX1-201ENST00000254325 C16orf82Q7Z2V1 217 aa12.94□□□□□ -0.34
RFX1-201ENST00000254325 GATAD1Q8WUU5 269 aa12.94□□□□□ -0.34
RFX1-201ENST00000254325 SLC45A2Q9UMX9 530 aa12.94□□□□□ -0.34
RFX1-201ENST00000254325 TGOLN2O43493 480 aa12.94□□□□□ -0.34
RFX1-201ENST00000254325 COX7A2P2O60397 106 aa12.94□□□□□ -0.34
RFX1-201ENST00000254325 NDUFB4O95168 129 aa12.94□□□□□ -0.34
RFX1-201ENST00000254325 APELAP0DMC3 54 aa12.94□□□□□ -0.34
RFX1-201ENST00000254325 OR10J1P30954 320 aa12.94□□□□□ -0.34
RFX1-201ENST00000254325 RAB1BQ9H0U4 201 aa12.94□□□□□ -0.34
RFX1-201ENST00000254325 A0A1W2PN81 502 aa12.94□□□□□ -0.34
RFX1-201ENST00000254325 NDUFA2O43678 99 aa12.94□□□□□ -0.34
RFX1-201ENST00000254325 PDE6DO43924 150 aa12.94□□□□□ -0.34
RFX1-201ENST00000254325 MYOD1P15172 320 aa12.94□□□□□ -0.34
RFX1-201ENST00000254325 PSG5Q15238 335 aa12.94□□□□□ -0.34
RFX1-201ENST00000254325 ZNF726P1Q15940 193 aa12.94□□□□□ -0.34
RFX1-201ENST00000254325 TNXAQ16473 311 aa12.94□□□□□ -0.34
RFX1-201ENST00000254325 OR52E5Q8NH55 327 aa12.94□□□□□ -0.34
RFX1-201ENST00000254325 MISP3Q96FF7 219 aa12.94□□□□□ -0.34
RFX1-201ENST00000254325 GGACTQ9BVM4 153 aa12.94□□□□□ -0.34
RFX1-201ENST00000254325 INSIG2Q9Y5U4 225 aa12.94□□□□□ -0.34
RFX1-201ENST00000254325 LYNX1G3V0Z9 82 aa12.94□□□□□ -0.34
RFX1-201ENST00000254325 TMEM178BH3BS89 294 aa12.94□□□□□ -0.34
RFX1-201ENST00000254325 SLC25A17O43808 307 aa12.94□□□□□ -0.34
RFX1-201ENST00000254325 LYNX1P0DP58 116 aa12.94□□□□□ -0.34
RFX1-201ENST00000254325 MEOX2P50222 304 aa12.94□□□□□ -0.34
RFX1-201ENST00000254325 C22orf34Q6ZV56 151 aa12.94□□□□□ -0.34
RFX1-201ENST00000254325 OR9G1Q8NH87 305 aa12.94□□□□□ -0.34
RFX1-201ENST00000254325 WASHC3Q9Y3C0 194 aa12.94□□□□□ -0.34
RFX1-201ENST00000254325 ZNF98A6NK75 572 aa12.93□□□□□ -0.34
RFX1-201ENST00000254325 ZNF705GA8MUZ8 300 aaPredicted RBP12.93□□□□□ -0.34
RFX1-201ENST00000254325 TMEM250H0YL14 139 aa12.93□□□□□ -0.34
RFX1-201ENST00000254325 LHBP01229 141 aa12.93□□□□□ -0.34
RFX1-201ENST00000254325 HABP2Q14520 560 aaPredicted RBP12.93□□□□□ -0.34
RFX1-201ENST00000254325 STPG3Q8N7X2 389 aa12.93□□□□□ -0.34
RFX1-201ENST00000254325 SAA1P0DJI8 122 aaPredicted RBP12.93□□□□□ -0.34
RFX1-201ENST00000254325 SLC16A13Q7RTY0 426 aa12.93□□□□□ -0.34
RFX1-201ENST00000254325 OR4C13Q8NGP0 309 aa12.93□□□□□ -0.34
RFX1-201ENST00000254325 TLN1Q9Y490 2541 aaKnown RBP12.93□□□□□ -0.34
RFX1-201ENST00000254325 CXorf65A6NEN9 183 aa12.93□□□□□ -0.34
RFX1-201ENST00000254325 MMP23AO75900 390 aa12.93□□□□□ -0.34
RFX1-201ENST00000254325 IL6RP08887 468 aaPredicted RBP12.93□□□□□ -0.34
RFX1-201ENST00000254325 CCKARP32238 428 aa12.93□□□□□ -0.34
RFX1-201ENST00000254325 ZNF295-AS1Q8N0V1 137 aa12.93□□□□□ -0.34
RFX1-201ENST00000254325 OSR1Q8TAX0 266 aaPredicted RBP12.93□□□□□ -0.34
RFX1-201ENST00000254325 TMEM186Q96B77 213 aa12.93□□□□□ -0.34
RFX1-201ENST00000254325 SDF2L1Q9HCN8 221 aa12.93□□□□□ -0.34
RFX1-201ENST00000254325 RPH3ALQ9UNE2 315 aa12.93□□□□□ -0.34
RFX1-201ENST00000254325 UPK2O00526 184 aa12.92□□□□□ -0.34
RFX1-201ENST00000254325 MGST1P10620 155 aaKnown RBP12.92□□□□□ -0.34
RFX1-201ENST00000254325 RAB4BP61018 213 aa12.92□□□□□ -0.34
RFX1-201ENST00000254325 SSX2Q16385 188 aa12.92□□□□□ -0.34
RFX1-201ENST00000254325 TREML4Q6UXN2 200 aa12.92□□□□□ -0.34
RFX1-201ENST00000254325 LINC00518Q8N0U6 118 aa12.92□□□□□ -0.34
RFX1-201ENST00000254325 OR8B3Q8NGG8 313 aa12.92□□□□□ -0.34
RFX1-201ENST00000254325 RAB1CQ92928 201 aa12.92□□□□□ -0.34
RFX1-201ENST00000254325 OR8B2Q96RD0 313 aa12.92□□□□□ -0.34
RFX1-201ENST00000254325 PARD6GQ9BYG4 376 aaPredicted RBP12.92□□□□□ -0.34
RFX1-201ENST00000254325 SPTAN1Q13813 2472 aaKnown RBP12.92□□□□□ -0.34
RFX1-201ENST00000254325 TRGC2P03986 189 aa12.92□□□□□ -0.34
RFX1-201ENST00000254325 PRB3Q04118 309 aaPredicted RBP12.92□□□□□ -0.34
RFX1-201ENST00000254325 KLRB1Q12918 225 aa12.92□□□□□ -0.34
RFX1-201ENST00000254325 TMEM200BQ69YZ2 307 aa12.92□□□□□ -0.34
RFX1-201ENST00000254325 Q8TCH9 128 aa12.92□□□□□ -0.34
RFX1-201ENST00000254325 Q8WTZ3 238 aa12.92□□□□□ -0.34
RFX1-201ENST00000254325 TECRQ9NZ01 308 aaKnown RBP12.92□□□□□ -0.34
RFX1-201ENST00000254325 A0A087WWC5 75 aa12.92□□□□□ -0.34
RFX1-201ENST00000254325 A0A1W2PRD5 423 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms