RNA–Protein interactions for RNA: ENST00000244815.9

LRRFIP1-201, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRFIP1, Length 4,370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-201ENST00000244815 CA7P43166 264 aa13.49□□□□□ -0.25
LRRFIP1-201ENST00000244815 MUC15Q8N387 334 aa13.49□□□□□ -0.25
LRRFIP1-201ENST00000244815 CDC42EP3Q9UKI2 254 aa13.49□□□□□ -0.25
LRRFIP1-201ENST00000244815 DOCK10Q96BY6 2186 aa13.49□□□□□ -0.25
LRRFIP1-201ENST00000244815 OTX1P32242 354 aaPredicted RBP13.49□□□□□ -0.25
LRRFIP1-201ENST00000244815 NMUP48645 174 aa13.49□□□□□ -0.25
LRRFIP1-201ENST00000244815 RPL23P62829 140 aaKnown RBP13.49□□□□□ -0.25
LRRFIP1-201ENST00000244815 ZNF146Q15072 292 aa13.49□□□□□ -0.25
LRRFIP1-201ENST00000244815 PCSK4Q6UW60 755 aa13.49□□□□□ -0.25
LRRFIP1-201ENST00000244815 SCN5AQ14524 2016 aa13.48□□□□□ -0.25
LRRFIP1-201ENST00000244815 VWA8A3KMH1 1905 aa13.48□□□□□ -0.25
LRRFIP1-201ENST00000244815 IMMP2LQ96T52 175 aa13.48□□□□□ -0.25
LRRFIP1-201ENST00000244815 MRPL37Q9BZE1 423 aaKnown RBP13.48□□□□□ -0.25
LRRFIP1-201ENST00000244815 FOXJ2Q9P0K8 574 aa13.48□□□□□ -0.25
LRRFIP1-201ENST00000244815 CGAP01215 116 aa13.48□□□□□ -0.25
LRRFIP1-201ENST00000244815 REG1AP05451 166 aa13.48□□□□□ -0.25
LRRFIP1-201ENST00000244815 PLPPR1Q8TBJ4 325 aa13.48□□□□□ -0.25
LRRFIP1-201ENST00000244815 GP6Q9HCN6 339 aa13.48□□□□□ -0.25
LRRFIP1-201ENST00000244815 K7ERU9 68 aa13.48□□□□□ -0.25
LRRFIP1-201ENST00000244815 CECR9P0C854 216 aa13.48□□□□□ -0.25
LRRFIP1-201ENST00000244815 BMI1P35226 326 aa13.48□□□□□ -0.25
LRRFIP1-201ENST00000244815 ECSCRQ19T08 205 aa13.48□□□□□ -0.25
LRRFIP1-201ENST00000244815 RNF144BQ7Z419 303 aa13.48□□□□□ -0.25
LRRFIP1-201ENST00000244815 LRTM2Q8N967 370 aa13.48□□□□□ -0.25
LRRFIP1-201ENST00000244815 LOC102723996A0A087X1L8 192 aa13.48□□□□□ -0.25
LRRFIP1-201ENST00000244815 FTH1P19P0C7X4 201 aa13.48□□□□□ -0.25
LRRFIP1-201ENST00000244815 CCDC144NLQ6NUI1 221 aa13.48□□□□□ -0.25
LRRFIP1-201ENST00000244815 OR4A5Q8NH83 315 aa13.48□□□□□ -0.25
LRRFIP1-201ENST00000244815 ZFP30Q9Y2G7 519 aa13.48□□□□□ -0.25
LRRFIP1-201ENST00000244815 ABCA4P78363 2273 aa13.47□□□□□ -0.25
LRRFIP1-201ENST00000244815 TMEM189A5PLL7 270 aa13.47□□□□□ -0.25
LRRFIP1-201ENST00000244815 HIST1H2BKO60814 126 aa13.47□□□□□ -0.25
LRRFIP1-201ENST00000244815 HIST1H2BJP06899 126 aa13.47□□□□□ -0.25
LRRFIP1-201ENST00000244815 HIST1H2BOP23527 126 aa13.47□□□□□ -0.25
LRRFIP1-201ENST00000244815 HIST1H2BBP33778 126 aa13.47□□□□□ -0.25
LRRFIP1-201ENST00000244815 HIST1H2BDP58876 126 aa13.47□□□□□ -0.25
LRRFIP1-201ENST00000244815 HIST1H2BCP62807 126 aa13.47□□□□□ -0.25
LRRFIP1-201ENST00000244815 HIST2H2BEQ16778 126 aa13.47□□□□□ -0.25
LRRFIP1-201ENST00000244815 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.47□□□□□ -0.25
LRRFIP1-201ENST00000244815 HIST1H2BHQ93079 126 aa13.47□□□□□ -0.25
LRRFIP1-201ENST00000244815 HIST1H2BNQ99877 126 aa13.47□□□□□ -0.25
LRRFIP1-201ENST00000244815 HIST1H2BMQ99879 126 aa13.47□□□□□ -0.25
LRRFIP1-201ENST00000244815 COLQQ9Y215 455 aaPredicted RBP13.47□□□□□ -0.25
LRRFIP1-201ENST00000244815 TRBV9A0A0B4J1U6 114 aa13.47□□□□□ -0.25
LRRFIP1-201ENST00000244815 CDX4O14627 284 aaPredicted RBP13.47□□□□□ -0.25
LRRFIP1-201ENST00000244815 CD55P08174 381 aa13.47□□□□□ -0.25
LRRFIP1-201ENST00000244815 WDYHV1Q96HA8 205 aa13.47□□□□□ -0.25
LRRFIP1-201ENST00000244815 WDR81Q562E7 1941 aa13.47□□□□□ -0.25
LRRFIP1-201ENST00000244815 SCO2A0A1W2PP80 73 aa13.47□□□□□ -0.25
LRRFIP1-201ENST00000244815 FBLL1A6NHQ2 334 aaKnown RBP13.47□□□□□ -0.25
LRRFIP1-201ENST00000244815 FOLR2P14207 255 aa13.47□□□□□ -0.25
LRRFIP1-201ENST00000244815 ERVFRD-1P60508 538 aa13.47□□□□□ -0.25
LRRFIP1-201ENST00000244815 STPG1Q5TH74 334 aa13.47□□□□□ -0.25
LRRFIP1-201ENST00000244815 SPANXN1Q5VSR9 72 aa13.47□□□□□ -0.25
LRRFIP1-201ENST00000244815 C12orf54Q6X4T0 127 aa13.47□□□□□ -0.25
LRRFIP1-201ENST00000244815 OR4D5Q8NGN0 318 aa13.47□□□□□ -0.25
LRRFIP1-201ENST00000244815 SRSF12Q8WXF0 261 aaKnown RBP13.47□□□□□ -0.25
LRRFIP1-201ENST00000244815 ZNF407Q9C0G0 2248 aa13.47□□□□□ -0.25
LRRFIP1-201ENST00000244815 FOXA3P55318 350 aaPredicted RBP13.46□□□□□ -0.25
LRRFIP1-201ENST00000244815 PET117Q6UWS5 81 aa13.46□□□□□ -0.25
LRRFIP1-201ENST00000244815 FGFBP3Q8TAT2 258 aa13.46□□□□□ -0.25
LRRFIP1-201ENST00000244815 MYOZ3Q8TDC0 251 aa13.46□□□□□ -0.25
LRRFIP1-201ENST00000244815 CKS2P33552 79 aa13.46□□□□□ -0.25
LRRFIP1-201ENST00000244815 ATP5IP56385 69 aaPredicted RBP13.46□□□□□ -0.25
LRRFIP1-201ENST00000244815 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.46□□□□□ -0.25
LRRFIP1-201ENST00000244815 ZIC4Q8N9L1 334 aa13.46□□□□□ -0.25
LRRFIP1-201ENST00000244815 HEATR5AQ86XA9 2040 aa13.46□□□□□ -0.25
LRRFIP1-201ENST00000244815 HEATR1Q9H583 2144 aaKnown RBP13.46□□□□□ -0.25
LRRFIP1-201ENST00000244815 IGFBP2P18065 325 aa13.46□□□□□ -0.26
LRRFIP1-201ENST00000244815 CRYGSP22914 178 aa13.46□□□□□ -0.26
LRRFIP1-201ENST00000244815 GLRXP35754 106 aa13.46□□□□□ -0.26
LRRFIP1-201ENST00000244815 KIR2DL2P43627 348 aaPredicted RBP13.46□□□□□ -0.26
LRRFIP1-201ENST00000244815 SRSF9Q13242 221 aaKnown RBP eCLIP13.46□□□□□ -0.264e-7■■■■□ 22.8
LRRFIP1-201ENST00000244815 FAM201AQ5SY85 155 aa13.46□□□□□ -0.26
LRRFIP1-201ENST00000244815 NEU1Q99519 415 aa13.46□□□□□ -0.26
LRRFIP1-201ENST00000244815 FOXD3Q9UJU5 478 aaPredicted RBP13.46□□□□□ -0.26
LRRFIP1-201ENST00000244815 LRRK1Q38SD2 2015 aa13.46□□□□□ -0.26
LRRFIP1-201ENST00000244815 FCGR2BP31994 310 aaPredicted RBP13.46□□□□□ -0.26
LRRFIP1-201ENST00000244815 RPL13AP40429 203 aaKnown RBP13.46□□□□□ -0.26
LRRFIP1-201ENST00000244815 CLDN18P56856 261 aa13.46□□□□□ -0.26
LRRFIP1-201ENST00000244815 CTAG1AP78358 180 aa13.46□□□□□ -0.26
LRRFIP1-201ENST00000244815 HERPUD1Q15011 391 aa13.46□□□□□ -0.26
LRRFIP1-201ENST00000244815 HEPN1Q6WQI6 88 aa13.46□□□□□ -0.26
LRRFIP1-201ENST00000244815 FDCSPQ8NFU4 85 aa13.46□□□□□ -0.26
LRRFIP1-201ENST00000244815 OR9G1Q8NH87 305 aa13.46□□□□□ -0.26
LRRFIP1-201ENST00000244815 GTF3AQ92664 365 aaKnown RBP13.46□□□□□ -0.26
LRRFIP1-201ENST00000244815 DPRXA6NFQ7 191 aa13.45□□□□□ -0.26
LRRFIP1-201ENST00000244815 E9PQ18 207 aa13.45□□□□□ -0.26
LRRFIP1-201ENST00000244815 FHL1Q13642 323 aa13.45□□□□□ -0.26
LRRFIP1-201ENST00000244815 OR4A47Q6IF82 309 aa13.45□□□□□ -0.26
LRRFIP1-201ENST00000244815 SLC25A34Q6PIV7 304 aa13.45□□□□□ -0.26
LRRFIP1-201ENST00000244815 RTN4RL2Q86UN3 420 aa13.45□□□□□ -0.26
LRRFIP1-201ENST00000244815 IL36BQ9NZH7 164 aa13.45□□□□□ -0.26
LRRFIP1-201ENST00000244815 TCF20Q9UGU0 1960 aaKnown RBP13.45□□□□□ -0.26
LRRFIP1-201ENST00000244815 C5orf63A6NC05 138 aa13.45□□□□□ -0.26
LRRFIP1-201ENST00000244815 UBE2CO00762 179 aa13.45□□□□□ -0.26
LRRFIP1-201ENST00000244815 TWIST1Q15672 202 aa13.45□□□□□ -0.26
LRRFIP1-201ENST00000244815 COL25A1Q9BXS0 654 aaPredicted RBP13.45□□□□□ -0.26
LRRFIP1-201ENST00000244815 TRAV24A0A0B4J272 114 aa13.45□□□□□ -0.26
LRRFIP1-201ENST00000244815 CELA3BP08861 270 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms