RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 CENPWQ5EE01 88 aa11.58□□□□□ -0.56
NFKB1-201ENST00000226574 PEAR1Q5VY43 1037 aaPredicted RBP11.58□□□□□ -0.56
NFKB1-201ENST00000226574 OR2T6Q8NHC8 308 aa11.58□□□□□ -0.56
NFKB1-201ENST00000226574 RNF7Q9UBF6 113 aa11.58□□□□□ -0.56
NFKB1-201ENST00000226574 PCDH15Q96QU1 1955 aa11.58□□□□□ -0.56
NFKB1-201ENST00000226574 PGPA6NDG6 321 aa11.58□□□□□ -0.56
NFKB1-201ENST00000226574 J3KRW8 73 aa11.58□□□□□ -0.56
NFKB1-201ENST00000226574 CD81P60033 236 aa11.58□□□□□ -0.56
NFKB1-201ENST00000226574 DMRTA1Q5VZB9 504 aa11.58□□□□□ -0.56
NFKB1-201ENST00000226574 VWA1Q6PCB0 445 aa11.58□□□□□ -0.56
NFKB1-201ENST00000226574 DNM1P46Q6ZS02 220 aa11.58□□□□□ -0.56
NFKB1-201ENST00000226574 LHFPL4Q7Z7J7 247 aa11.58□□□□□ -0.56
NFKB1-201ENST00000226574 TGIF2LYQ8IUE0 185 aa11.58□□□□□ -0.56
NFKB1-201ENST00000226574 IGHV3-35A0A0C4DH35 117 aa11.57□□□□□ -0.56
NFKB1-201ENST00000226574 CEACAM1P13688 526 aa11.57□□□□□ -0.56
NFKB1-201ENST00000226574 IGFBP2P18065 325 aa11.57□□□□□ -0.56
NFKB1-201ENST00000226574 CDPF1Q6NVV7 123 aa11.57□□□□□ -0.56
NFKB1-201ENST00000226574 TMEM256Q8N2U0 113 aa11.57□□□□□ -0.56
NFKB1-201ENST00000226574 NABP2Q9BQ15 211 aa11.57□□□□□ -0.56
NFKB1-201ENST00000226574 PAXXQ9BUH6 204 aa11.57□□□□□ -0.56
NFKB1-201ENST00000226574 ZNF703Q9H7S9 590 aaPredicted RBP11.57□□□□□ -0.56
NFKB1-201ENST00000226574 CALYQ9NYX4 217 aa11.57□□□□□ -0.56
NFKB1-201ENST00000226574 ONECUT1Q9UBC0 465 aa11.57□□□□□ -0.56
NFKB1-201ENST00000226574 NOTCH2Q04721 2471 aa11.57□□□□□ -0.56
NFKB1-201ENST00000226574 GCHFRP30047 84 aa11.57□□□□□ -0.56
NFKB1-201ENST00000226574 COL5A1-AS1Q5SY13 56 aa11.57□□□□□ -0.56
NFKB1-201ENST00000226574 SMIM15Q7Z3B0 74 aa11.57□□□□□ -0.56
NFKB1-201ENST00000226574 TMEM105Q8N8V8 129 aa11.57□□□□□ -0.56
NFKB1-201ENST00000226574 OR8A1Q8NGG7 326 aa11.57□□□□□ -0.56
NFKB1-201ENST00000226574 RNASE7Q9H1E1 156 aaKnown RBP11.57□□□□□ -0.56
NFKB1-201ENST00000226574 SAP30LQ9HAJ7 183 aa11.57□□□□□ -0.56
NFKB1-201ENST00000226574 PLXNB3Q9ULL4 1909 aa11.57□□□□□ -0.56
NFKB1-201ENST00000226574 CSPG4Q6UVK1 2322 aa11.57□□□□□ -0.56
NFKB1-201ENST00000226574 A0A087WWC5 75 aa11.57□□□□□ -0.56
NFKB1-201ENST00000226574 SNAI2O43623 268 aa11.57□□□□□ -0.56
NFKB1-201ENST00000226574 CA1P00915 261 aaPredicted RBP11.57□□□□□ -0.56
NFKB1-201ENST00000226574 CA2P00918 260 aa11.57□□□□□ -0.56
NFKB1-201ENST00000226574 RND2P52198 227 aa11.57□□□□□ -0.56
NFKB1-201ENST00000226574 PRNDQ9UKY0 176 aa11.57□□□□□ -0.56
NFKB1-201ENST00000226574 IGKV3-7A0A075B6H7 116 aa11.56□□□□□ -0.56
NFKB1-201ENST00000226574 CEACAM18A8MTB9 384 aa11.56□□□□□ -0.56
NFKB1-201ENST00000226574 SLC25A17O43808 307 aa11.56□□□□□ -0.56
NFKB1-201ENST00000226574 PSPNO60542 156 aa11.56□□□□□ -0.56
NFKB1-201ENST00000226574 IGKV1-5P01602 117 aa11.56□□□□□ -0.56
NFKB1-201ENST00000226574 STARD6P59095 220 aa11.56□□□□□ -0.56
NFKB1-201ENST00000226574 HSPE1P61604 102 aaKnown RBP11.56□□□□□ -0.56
NFKB1-201ENST00000226574 SPSB3Q6PJ21 355 aa11.56□□□□□ -0.56
NFKB1-201ENST00000226574 SAXO1Q8IYX7 474 aa11.56□□□□□ -0.56
NFKB1-201ENST00000226574 CHRDL1Q9BU40 450 aa11.56□□□□□ -0.56
NFKB1-201ENST00000226574 ACACBO00763 2458 aa11.56□□□□□ -0.56
NFKB1-201ENST00000226574 SERF1AO75920 110 aa11.56□□□□□ -0.56
NFKB1-201ENST00000226574 RPL30P62888 115 aaKnown RBP11.56□□□□□ -0.56
NFKB1-201ENST00000226574 NMSQ5H8A3 153 aa11.56□□□□□ -0.56
NFKB1-201ENST00000226574 GFRALQ6UXV0 394 aa11.56□□□□□ -0.56
NFKB1-201ENST00000226574 NPIPB3Q92617 1050 aa11.56□□□□□ -0.56
NFKB1-201ENST00000226574 CLEC5AQ9NY25 188 aa11.56□□□□□ -0.56
NFKB1-201ENST00000226574 FAM90A26D6RGX4 464 aa11.56□□□□□ -0.56
NFKB1-201ENST00000226574 SELLP14151 372 aa11.56□□□□□ -0.56
NFKB1-201ENST00000226574 CSRP1P21291 193 aaKnown RBP11.56□□□□□ -0.56
NFKB1-201ENST00000226574 GPR6P46095 362 aaPredicted RBP11.56□□□□□ -0.56
NFKB1-201ENST00000226574 RSPO1Q2MKA7 263 aaPredicted RBP11.56□□□□□ -0.56
NFKB1-201ENST00000226574 TMEM108Q6UXF1 575 aa11.56□□□□□ -0.56
NFKB1-201ENST00000226574 LRTM2Q8N967 370 aa11.56□□□□□ -0.56
NFKB1-201ENST00000226574 OR1L8Q8NGR8 309 aa11.56□□□□□ -0.56
NFKB1-201ENST00000226574 NEU1Q99519 415 aa11.56□□□□□ -0.56
NFKB1-201ENST00000226574 PPP1R14DQ9NXH3 145 aa11.56□□□□□ -0.56
NFKB1-201ENST00000226574 PTPN13Q12923 2485 aa11.56□□□□□ -0.56
NFKB1-201ENST00000226574 A6NNC1 897 aa11.55□□□□□ -0.56
NFKB1-201ENST00000226574 B4E171 279 aa11.55□□□□□ -0.56
NFKB1-201ENST00000226574 TSPAN7P41732 249 aa11.55□□□□□ -0.56
NFKB1-201ENST00000226574 PRNTQ86SH4 94 aa11.55□□□□□ -0.56
NFKB1-201ENST00000226574 ASCL3Q9NQ33 180 aa11.55□□□□□ -0.56
NFKB1-201ENST00000226574 C2CD3Q4AC94 2353 aa11.55□□□□□ -0.56
NFKB1-201ENST00000226574 MUC21A0A0G2JKD1 596 aa11.55□□□□□ -0.56
NFKB1-201ENST00000226574 MUC21A0A140T8X8 626 aa11.55□□□□□ -0.56
NFKB1-201ENST00000226574 A0A1W2PN81 502 aa11.55□□□□□ -0.56
NFKB1-201ENST00000226574 TMEM210A6NLX4 147 aa11.55□□□□□ -0.56
NFKB1-201ENST00000226574 GABRA6Q16445 453 aa11.55□□□□□ -0.56
NFKB1-201ENST00000226574 MUC21Q5SSG8 566 aa11.55□□□□□ -0.56
NFKB1-201ENST00000226574 EAF1Q96JC9 268 aaPredicted RBP11.55□□□□□ -0.56
NFKB1-201ENST00000226574 GAL3ST2Q9H3Q3 398 aa11.55□□□□□ -0.56
NFKB1-201ENST00000226574 UNC80Q8N2C7 3258 aa11.55□□□□□ -0.56
NFKB1-201ENST00000226574 C21orf140B9A014 251 aa11.55□□□□□ -0.56
NFKB1-201ENST00000226574 IL6RP08887 468 aaPredicted RBP11.55□□□□□ -0.56
NFKB1-201ENST00000226574 FOLR2P14207 255 aa11.55□□□□□ -0.56
NFKB1-201ENST00000226574 UQCRFS1P47985 274 aa11.55□□□□□ -0.56
NFKB1-201ENST00000226574 ZNF324BQ6AW86 544 aaPredicted RBP11.55□□□□□ -0.56
NFKB1-201ENST00000226574 GGNQ86UU5 652 aa11.55□□□□□ -0.56
NFKB1-201ENST00000226574 C17orf82Q86X59 251 aaPredicted RBP11.55□□□□□ -0.56
NFKB1-201ENST00000226574 OCC1Q8TAD7 63 aa11.55□□□□□ -0.56
NFKB1-201ENST00000226574 PLXNB1O43157 2135 aa11.55□□□□□ -0.56
NFKB1-201ENST00000226574 MOSP00540 346 aa11.55□□□□□ -0.56
NFKB1-201ENST00000226574 NTF4P34130 210 aa11.55□□□□□ -0.56
NFKB1-201ENST00000226574 PAFAH1B2P68402 229 aa11.55□□□□□ -0.56
NFKB1-201ENST00000226574 ADTRPQ96IZ2 230 aa11.55□□□□□ -0.56
NFKB1-201ENST00000226574 PGLYRP4Q96LB8 373 aa11.55□□□□□ -0.56
NFKB1-201ENST00000226574 AMMECR1Q9Y4X0 333 aaPredicted RBP11.55□□□□□ -0.56
NFKB1-201ENST00000226574 CUL9Q8IWT3 2517 aa11.54□□□□□ -0.56
NFKB1-201ENST00000226574 K7ESF4 209 aa11.54□□□□□ -0.56
NFKB1-201ENST00000226574 MIR17HGQ75NE6 70 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms