RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 HEYLQ9NQ87 328 aaPredicted RBP20.53■□□□□ 0.88
RUNDC3A-201ENST00000225441 PRSS46E5RG02 174 aa20.53■□□□□ 0.88
RUNDC3A-201ENST00000225441 FNDC10F2Z333 226 aa20.53■□□□□ 0.88
RUNDC3A-201ENST00000225441 HMGB3O15347 200 aaKnown RBP20.53■□□□□ 0.88
RUNDC3A-201ENST00000225441 GNLYP22749 145 aa20.53■□□□□ 0.88
RUNDC3A-201ENST00000225441 GATA4P43694 442 aa20.53■□□□□ 0.88
RUNDC3A-201ENST00000225441 OR2T10Q8NGZ9 312 aa20.53■□□□□ 0.88
RUNDC3A-201ENST00000225441 MEGF10Q96KG7 1140 aa20.53■□□□□ 0.88
RUNDC3A-201ENST00000225441 TMEM204Q9BSN7 226 aa20.53■□□□□ 0.88
RUNDC3A-201ENST00000225441 DCTN5Q9BTE1 182 aa20.53■□□□□ 0.88
RUNDC3A-201ENST00000225441 GFOD1Q9NXC2 390 aa20.53■□□□□ 0.88
RUNDC3A-201ENST00000225441 DUSP13Q9UII6 198 aa20.53■□□□□ 0.88
RUNDC3A-201ENST00000225441 USF3Q68DE3 2245 aa20.52■□□□□ 0.88
RUNDC3A-201ENST00000225441 CACNA1BQ00975 2339 aa20.52■□□□□ 0.88
RUNDC3A-201ENST00000225441 TFF1P04155 84 aa20.52■□□□□ 0.88
RUNDC3A-201ENST00000225441 UQCRFS1P47985 274 aa20.52■□□□□ 0.88
RUNDC3A-201ENST00000225441 SSX8Q7RTT4 187 aa20.52■□□□□ 0.88
RUNDC3A-201ENST00000225441 FAM222BQ8WU58 562 aa20.52■□□□□ 0.88
RUNDC3A-201ENST00000225441 TMEM170AQ8WVE7 144 aa20.52■□□□□ 0.88
RUNDC3A-201ENST00000225441 CALYQ9NYX4 217 aa20.52■□□□□ 0.88
RUNDC3A-201ENST00000225441 KALRNO60229 2985 aa20.51■□□□□ 0.87
RUNDC3A-201ENST00000225441 TRAV20A0A0B4J274 112 aa20.51■□□□□ 0.87
RUNDC3A-201ENST00000225441 DVL1O14640 695 aa20.51■□□□□ 0.87
RUNDC3A-201ENST00000225441 CXorf1O96002 111 aa20.51■□□□□ 0.87
RUNDC3A-201ENST00000225441 THBS3P49746 956 aa20.51■□□□□ 0.87
RUNDC3A-201ENST00000225441 KLF3P57682 345 aaPredicted RBP20.51■□□□□ 0.87
RUNDC3A-201ENST00000225441 TREML4Q6UXN2 200 aa20.51■□□□□ 0.87
RUNDC3A-201ENST00000225441 ZNF383Q8NA42 475 aa20.51■□□□□ 0.87
RUNDC3A-201ENST00000225441 OR5R1Q8NH85 324 aa20.51■□□□□ 0.87
RUNDC3A-201ENST00000225441 GATAD1Q8WUU5 269 aa20.51■□□□□ 0.87
RUNDC3A-201ENST00000225441 PDLIM4P50479 330 aa20.5■□□□□ 0.87
RUNDC3A-201ENST00000225441 GFI1BQ5VTD9 330 aa20.5■□□□□ 0.87
RUNDC3A-201ENST00000225441 BBC3Q96PG8 261 aaPredicted RBP20.5■□□□□ 0.87
RUNDC3A-201ENST00000225441 NPVFQ9HCQ7 196 aa20.5■□□□□ 0.87
RUNDC3A-201ENST00000225441 IGLV3-9A0A075B6K5 115 aa20.5■□□□□ 0.87
RUNDC3A-201ENST00000225441 THBDP07204 575 aa20.5■□□□□ 0.87
RUNDC3A-201ENST00000225441 STAG3L2P0CL84 134 aa20.5■□□□□ 0.87
RUNDC3A-201ENST00000225441 STAG3L3P0CL85 134 aa20.5■□□□□ 0.87
RUNDC3A-201ENST00000225441 ATP5IP56385 69 aaPredicted RBP20.5■□□□□ 0.87
RUNDC3A-201ENST00000225441 POU2AF1Q16633 256 aa20.5■□□□□ 0.87
RUNDC3A-201ENST00000225441 C4orf17Q53FE4 359 aa20.5■□□□□ 0.87
RUNDC3A-201ENST00000225441 OR1P1Q8NH06 330 aa20.5■□□□□ 0.87
RUNDC3A-201ENST00000225441 RNASE6Q93091 150 aaKnown RBP20.5■□□□□ 0.87
RUNDC3A-201ENST00000225441 PACRGQ96M98 296 aaPredicted RBP20.5■□□□□ 0.87
RUNDC3A-201ENST00000225441 HIST1H2BLQ99880 126 aa20.5■□□□□ 0.87
RUNDC3A-201ENST00000225441 TMEM140Q9NV12 185 aa20.5■□□□□ 0.87
RUNDC3A-201ENST00000225441 FOXA2Q9Y261 457 aaPredicted RBP20.5■□□□□ 0.87
RUNDC3A-201ENST00000225441 CRYAAP02489 173 aa20.49■□□□□ 0.87
RUNDC3A-201ENST00000225441 HNF4GQ14541 408 aa20.49■□□□□ 0.87
RUNDC3A-201ENST00000225441 SPINK9Q5DT21 86 aa20.49■□□□□ 0.87
RUNDC3A-201ENST00000225441 FAM209BQ5JX69 171 aa20.49■□□□□ 0.87
RUNDC3A-201ENST00000225441 WFDC8Q8IUA0 241 aa20.49■□□□□ 0.87
RUNDC3A-201ENST00000225441 OR2V2Q96R30 315 aa20.49■□□□□ 0.87
RUNDC3A-201ENST00000225441 ZMAT5Q9UDW3 170 aaKnown RBP20.49■□□□□ 0.87
RUNDC3A-201ENST00000225441 TCF19Q9Y242 345 aa20.49■□□□□ 0.87
RUNDC3A-201ENST00000225441 C15orf61A6NNL5 157 aa20.48■□□□□ 0.87
RUNDC3A-201ENST00000225441 FABP4P15090 132 aa20.48■□□□□ 0.87
RUNDC3A-201ENST00000225441 LINC00205P59089 165 aa20.48■□□□□ 0.87
RUNDC3A-201ENST00000225441 HOXA4Q00056 320 aaPredicted RBP20.48■□□□□ 0.87
RUNDC3A-201ENST00000225441 RAB31Q13636 194 aa20.48■□□□□ 0.87
RUNDC3A-201ENST00000225441 Q8TCH9 128 aa20.48■□□□□ 0.87
RUNDC3A-201ENST00000225441 CORO2AQ92828 525 aa20.48■□□□□ 0.87
RUNDC3A-201ENST00000225441 SDSLQ96GA7 329 aa20.48■□□□□ 0.87
RUNDC3A-201ENST00000225441 GGTLC1Q9BX51 225 aa20.48■□□□□ 0.87
RUNDC3A-201ENST00000225441 FAM234AQ9H0X4 552 aa20.48■□□□□ 0.87
RUNDC3A-201ENST00000225441 LSM4Q9Y4Z0 139 aaKnown RBP20.48■□□□□ 0.87
RUNDC3A-201ENST00000225441 PCNX1Q96RV3 2341 aa20.48■□□□□ 0.87
RUNDC3A-201ENST00000225441 NPPCP23582 126 aa20.48■□□□□ 0.87
RUNDC3A-201ENST00000225441 FOXL1Q12952 345 aa20.48■□□□□ 0.87
RUNDC3A-201ENST00000225441 CDSNQ15517 529 aa20.48■□□□□ 0.87
RUNDC3A-201ENST00000225441 ACTL10Q5JWF8 245 aa20.48■□□□□ 0.87
RUNDC3A-201ENST00000225441 LINC01551Q86U37 167 aa20.48■□□□□ 0.87
RUNDC3A-201ENST00000225441 LINC00574Q9H8X3 128 aa20.48■□□□□ 0.87
RUNDC3A-201ENST00000225441 PXMP4Q9Y6I8 212 aa20.48■□□□□ 0.87
RUNDC3A-201ENST00000225441 PRR14LQ5THK1 2151 aa20.47■□□□□ 0.87
RUNDC3A-201ENST00000225441 KBTBD11-OT1A0A1B0GTJ5 212 aa20.47■□□□□ 0.87
RUNDC3A-201ENST00000225441 HSPE1P61604 102 aaKnown RBP20.47■□□□□ 0.87
RUNDC3A-201ENST00000225441 GNB1P62873 340 aa20.47■□□□□ 0.87
RUNDC3A-201ENST00000225441 LTC4SQ16873 150 aa20.47■□□□□ 0.87
RUNDC3A-201ENST00000225441 WFIKKN1Q96NZ8 548 aa20.47■□□□□ 0.87
RUNDC3A-201ENST00000225441 RRHO14718 337 aa20.46■□□□□ 0.87
RUNDC3A-201ENST00000225441 MT-CO2P00403 227 aa20.46■□□□□ 0.87
RUNDC3A-201ENST00000225441 CD40P25942 277 aa20.46■□□□□ 0.87
RUNDC3A-201ENST00000225441 ZNF134P52741 427 aa20.46■□□□□ 0.87
RUNDC3A-201ENST00000225441 EDDM3BP56851 147 aa20.46■□□□□ 0.87
RUNDC3A-201ENST00000225441 RPS16P62249 146 aaKnown RBP20.46■□□□□ 0.87
RUNDC3A-201ENST00000225441 RPL39P5Q59GN2 51 aa20.46■□□□□ 0.87
RUNDC3A-201ENST00000225441 MOGAT3Q86VF5 341 aa20.46■□□□□ 0.87
RUNDC3A-201ENST00000225441 MGST2Q99735 147 aa20.46■□□□□ 0.87
RUNDC3A-201ENST00000225441 PCGF1Q9BSM1 259 aa20.46■□□□□ 0.87
RUNDC3A-201ENST00000225441 MS4A5Q9H3V2 200 aa20.46■□□□□ 0.87
RUNDC3A-201ENST00000225441 PRDM13Q9H4Q3 707 aa20.46■□□□□ 0.87
RUNDC3A-201ENST00000225441 TMEM14BQ9NUH8 114 aa20.46■□□□□ 0.87
RUNDC3A-201ENST00000225441 ARL2-SNX15V9GYD0 113 aa20.46■□□□□ 0.87
RUNDC3A-201ENST00000225441 NBASA2RRP1 2371 aa20.46■□□□□ 0.87
RUNDC3A-201ENST00000225441 SELENOVP59797 346 aa20.46■□□□□ 0.87
RUNDC3A-201ENST00000225441 PKIAP61925 76 aa20.46■□□□□ 0.87
RUNDC3A-201ENST00000225441 C17orf58Q2M2W7 97 aa20.46■□□□□ 0.87
RUNDC3A-201ENST00000225441 TMEM108Q6UXF1 575 aa20.46■□□□□ 0.87
RUNDC3A-201ENST00000225441 JOSD1Q15040 202 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms