RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 SULT1A4P0DMN0 295 aa10.41□□□□□ -0.74
TIMP1-201ENST00000218388 RPL27AP46776 148 aaKnown RBP10.41□□□□□ -0.74
TIMP1-201ENST00000218388 OR2B8PP59922 312 aa10.41□□□□□ -0.74
TIMP1-201ENST00000218388 TMEM267Q0VDI3 215 aaPredicted RBP10.41□□□□□ -0.74
TIMP1-201ENST00000218388 FOXL1Q12952 345 aa10.41□□□□□ -0.74
TIMP1-201ENST00000218388 SMCO1Q147U7 214 aa10.41□□□□□ -0.74
TIMP1-201ENST00000218388 NMSQ5H8A3 153 aa10.41□□□□□ -0.74
TIMP1-201ENST00000218388 ZNF429Q86V71 674 aa10.41□□□□□ -0.74
TIMP1-201ENST00000218388 MRPL41Q8IXM3 137 aaKnown RBP10.41□□□□□ -0.74
TIMP1-201ENST00000218388 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.41□□□□□ -0.74
TIMP1-201ENST00000218388 OR1L8Q8NGR8 309 aa10.41□□□□□ -0.74
TIMP1-201ENST00000218388 OR5B3Q8NH48 314 aa10.41□□□□□ -0.74
TIMP1-201ENST00000218388 GRPEL2Q8TAA5 225 aa10.41□□□□□ -0.74
TIMP1-201ENST00000218388 SRSF12Q8WXF0 261 aaKnown RBP10.41□□□□□ -0.74
TIMP1-201ENST00000218388 TMEM158Q8WZ71 300 aa10.41□□□□□ -0.74
TIMP1-201ENST00000218388 GPR146Q96CH1 333 aa10.41□□□□□ -0.74
TIMP1-201ENST00000218388 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.41□□□□□ -0.74
TIMP1-201ENST00000218388 TMEM14BQ9NUH8 114 aa10.41□□□□□ -0.74
TIMP1-201ENST00000218388 COA4Q9NYJ1 87 aa10.41□□□□□ -0.74
TIMP1-201ENST00000218388 CACNG5Q9UF02 275 aa10.41□□□□□ -0.74
TIMP1-201ENST00000218388 ZNF580Q9UK33 172 aa10.41□□□□□ -0.74
TIMP1-201ENST00000218388 FOXA2Q9Y261 457 aaPredicted RBP10.41□□□□□ -0.74
TIMP1-201ENST00000218388 ZNF257Q9Y2Q1 563 aa10.41□□□□□ -0.74
TIMP1-201ENST00000218388 NSG2Q9Y328 171 aa10.41□□□□□ -0.74
TIMP1-201ENST00000218388 OR51B2Q9Y5P1 312 aa10.41□□□□□ -0.74
TIMP1-201ENST00000218388 SETD2Q9BYW2 2564 aaPredicted RBP10.41□□□□□ -0.74
TIMP1-201ENST00000218388 TRAV3A0A0B4J244 114 aa10.4□□□□□ -0.74
TIMP1-201ENST00000218388 CLPSL1A2RUU4 121 aa10.4□□□□□ -0.74
TIMP1-201ENST00000218388 C7orf66A4D0T2 115 aa10.4□□□□□ -0.74
TIMP1-201ENST00000218388 ATP6V0E1O15342 81 aa10.4□□□□□ -0.74
TIMP1-201ENST00000218388 SSNA1O43805 119 aa10.4□□□□□ -0.74
TIMP1-201ENST00000218388 IGF1P05019 195 aa10.4□□□□□ -0.74
TIMP1-201ENST00000218388 SLC25A6P12236 298 aa10.4□□□□□ -0.74
TIMP1-201ENST00000218388 MRGPRG-AS1Q2M3A8 158 aa10.4□□□□□ -0.74
TIMP1-201ENST00000218388 GGNBP1Q5YKI7 109 aa10.4□□□□□ -0.74
TIMP1-201ENST00000218388 Q6ZS46 218 aa10.4□□□□□ -0.74
TIMP1-201ENST00000218388 SGMS2Q8NHU3 365 aa10.4□□□□□ -0.74
TIMP1-201ENST00000218388 TMEM68Q96MH6 324 aa10.4□□□□□ -0.74
TIMP1-201ENST00000218388 QTRT1Q9BXR0 403 aaKnown RBP10.4□□□□□ -0.74
TIMP1-201ENST00000218388 C2CD3Q4AC94 2353 aa10.4□□□□□ -0.74
TIMP1-201ENST00000218388 PLXNB1O43157 2135 aa10.39□□□□□ -0.75
TIMP1-201ENST00000218388 A0A0B4J293 547 aa10.39□□□□□ -0.75
TIMP1-201ENST00000218388 A0A0G2JRQ6 117 aa10.39□□□□□ -0.75
TIMP1-201ENST00000218388 DBX1A6NMT0 343 aa10.39□□□□□ -0.75
TIMP1-201ENST00000218388 IFNA17P01571 189 aa10.39□□□□□ -0.75
TIMP1-201ENST00000218388 CRIP2P52943 208 aaPredicted RBP10.39□□□□□ -0.75
TIMP1-201ENST00000218388 SLC35B1P78383 322 aa10.39□□□□□ -0.75
TIMP1-201ENST00000218388 NDPQ00604 133 aa10.39□□□□□ -0.75
TIMP1-201ENST00000218388 ECSCRQ19T08 205 aa10.39□□□□□ -0.75
TIMP1-201ENST00000218388 IZUMO4Q1ZYL8 232 aa10.39□□□□□ -0.75
TIMP1-201ENST00000218388 KRTAP24-1Q3LI83 254 aa10.39□□□□□ -0.75
TIMP1-201ENST00000218388 HSD17B13Q7Z5P4 300 aaPredicted RBP10.39□□□□□ -0.75
TIMP1-201ENST00000218388 STPG2Q8N412 459 aa10.39□□□□□ -0.75
TIMP1-201ENST00000218388 OR1S1Q8NH92 325 aa10.39□□□□□ -0.75
TIMP1-201ENST00000218388 LINC01006Q8NI28 216 aa10.39□□□□□ -0.75
TIMP1-201ENST00000218388 FYTTD1Q96QD9 318 aaKnown RBP10.39□□□□□ -0.75
TIMP1-201ENST00000218388 SRSF8Q9BRL6 282 aaKnown RBP10.39□□□□□ -0.75
TIMP1-201ENST00000218388 RNF114Q9Y508 228 aa10.39□□□□□ -0.75
TIMP1-201ENST00000218388 ALG5Q9Y673 324 aa10.39□□□□□ -0.75
TIMP1-201ENST00000218388 TNCP24821 2201 aa10.39□□□□□ -0.75
TIMP1-201ENST00000218388 TRAV41A0A0B4J266 112 aa10.38□□□□□ -0.75
TIMP1-201ENST00000218388 TEX50A0A1B0GTY4 177 aa10.38□□□□□ -0.75
TIMP1-201ENST00000218388 A0A1W2PN81 502 aa10.38□□□□□ -0.75
TIMP1-201ENST00000218388 TMEM89A2RUT3 159 aa10.38□□□□□ -0.75
TIMP1-201ENST00000218388 MSGN1A6NI15 193 aa10.38□□□□□ -0.75
TIMP1-201ENST00000218388 LINC01548A6NM66 108 aa10.38□□□□□ -0.75
TIMP1-201ENST00000218388 ADAP1O75689 374 aa10.38□□□□□ -0.75
TIMP1-201ENST00000218388 OPN1MWP04001 364 aa10.38□□□□□ -0.75
TIMP1-201ENST00000218388 TRAPPC2P0DI81 140 aa10.38□□□□□ -0.75
TIMP1-201ENST00000218388 TRAPPC2BP0DI82 140 aa10.38□□□□□ -0.75
TIMP1-201ENST00000218388 OPN1MW2P0DN77 364 aa10.38□□□□□ -0.75
TIMP1-201ENST00000218388 OPN1MW3P0DN78 364 aa10.38□□□□□ -0.75
TIMP1-201ENST00000218388 CHRNA7P36544 502 aa10.38□□□□□ -0.75
TIMP1-201ENST00000218388 HSPE1P61604 102 aaKnown RBP10.38□□□□□ -0.75
TIMP1-201ENST00000218388 SSBP2P81877 361 aaPredicted RBP10.38□□□□□ -0.75
TIMP1-201ENST00000218388 TMEM95Q3KNT9 176 aa10.38□□□□□ -0.75
TIMP1-201ENST00000218388 AKIRIN2Q53H80 203 aa10.38□□□□□ -0.75
TIMP1-201ENST00000218388 C10orf55Q5SWW7 151 aa10.38□□□□□ -0.75
TIMP1-201ENST00000218388 UNQ5815/PRO19632Q6UWF5 114 aa10.38□□□□□ -0.75
TIMP1-201ENST00000218388 GSG1LQ6UXU4 331 aa10.38□□□□□ -0.75
TIMP1-201ENST00000218388 OR52E5Q8NH55 327 aa10.38□□□□□ -0.75
TIMP1-201ENST00000218388 TAF15Q92804 592 aaKnown RBP eCLIP10.38□□□□□ -0.75
TIMP1-201ENST00000218388 FAM103A1Q9BTL3 118 aaKnown RBP10.38□□□□□ -0.75
TIMP1-201ENST00000218388 C19orf24Q9BVV8 132 aa10.38□□□□□ -0.75
TIMP1-201ENST00000218388 HINT2Q9BX68 163 aa10.38□□□□□ -0.75
TIMP1-201ENST00000218388 PLEKHA3Q9HB20 300 aa10.38□□□□□ -0.75
TIMP1-201ENST00000218388 ENY2Q9NPA8 101 aa10.38□□□□□ -0.75
TIMP1-201ENST00000218388 SERTAD4Q9NUC0 356 aa10.38□□□□□ -0.75
TIMP1-201ENST00000218388 NF1P21359 2839 aa10.37□□□□□ -0.75
TIMP1-201ENST00000218388 C13orf42A0A1B0GVH6 325 aa10.37□□□□□ -0.75
TIMP1-201ENST00000218388 PSMB11A5LHX3 300 aa10.37□□□□□ -0.75
TIMP1-201ENST00000218388 C5orf51A6NDU8 294 aa10.37□□□□□ -0.75
TIMP1-201ENST00000218388 FAM25EA8MYX2 175 aa10.37□□□□□ -0.75
TIMP1-201ENST00000218388 FAM90A26D6RGX4 464 aa10.37□□□□□ -0.75
TIMP1-201ENST00000218388 ST8SIA3O43173 380 aa10.37□□□□□ -0.75
TIMP1-201ENST00000218388 MDKP21741 143 aaPredicted RBP10.37□□□□□ -0.75
TIMP1-201ENST00000218388 SPCS3P61009 180 aa10.37□□□□□ -0.75
TIMP1-201ENST00000218388 PRCDQ00LT1 54 aa10.37□□□□□ -0.75
TIMP1-201ENST00000218388 AARDQ4LEZ3 155 aa10.37□□□□□ -0.75
TIMP1-201ENST00000218388 Q6ZRM9 215 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms