RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 SEC16AO15027 2179 aa11.53□□□□□ -0.56
TGFBR3-201ENST00000212355 PGPEP1LA6NFU8 196 aa11.53□□□□□ -0.56
TGFBR3-201ENST00000212355 IGKV1D-33P01593 117 aa11.53□□□□□ -0.56
TGFBR3-201ENST00000212355 IGKV1-33P01594 117 aa11.53□□□□□ -0.56
TGFBR3-201ENST00000212355 PATJQ8NI35 1801 aa11.53□□□□□ -0.56
TGFBR3-201ENST00000212355 CENPVQ7Z7K6 275 aaPredicted RBP11.53□□□□□ -0.56
TGFBR3-201ENST00000212355 A0A1B0GV72 72 aa11.52□□□□□ -0.56
TGFBR3-201ENST00000212355 DDB2Q92466 427 aa11.52□□□□□ -0.56
TGFBR3-201ENST00000212355 CTHRC1Q96CG8 243 aa11.52□□□□□ -0.56
TGFBR3-201ENST00000212355 SCARF2Q96GP6 870 aaPredicted RBP11.52□□□□□ -0.56
TGFBR3-201ENST00000212355 NPCDR1Q9BY65 106 aa11.52□□□□□ -0.56
TGFBR3-201ENST00000212355 TMEM14DPA8MWL7 114 aa11.52□□□□□ -0.57
TGFBR3-201ENST00000212355 RNASE7Q9H1E1 156 aaKnown RBP11.52□□□□□ -0.57
TGFBR3-201ENST00000212355 RNASE4P34096 147 aaKnown RBP11.52□□□□□ -0.57
TGFBR3-201ENST00000212355 RPS11P62280 158 aaKnown RBP eCLIP11.52□□□□□ -0.57
TGFBR3-201ENST00000212355 SPSB4Q96A44 273 aa11.52□□□□□ -0.57
TGFBR3-201ENST00000212355 B4E171 279 aa11.52□□□□□ -0.57
TGFBR3-201ENST00000212355 RAMP3O60896 148 aa11.52□□□□□ -0.57
TGFBR3-201ENST00000212355 PPIFP30405 207 aaKnown RBP11.52□□□□□ -0.57
TGFBR3-201ENST00000212355 TSPAN7P41732 249 aa11.52□□□□□ -0.57
TGFBR3-201ENST00000212355 RTN4RL2Q86UN3 420 aa11.52□□□□□ -0.57
TGFBR3-201ENST00000212355 WDR82Q6UXN9 313 aa11.52□□□□□ -0.57
TGFBR3-201ENST00000212355 C11orf44Q8N8P7 122 aa11.52□□□□□ -0.57
TGFBR3-201ENST00000212355 ZCCHC14Q8WYQ9 949 aaKnown RBP11.52□□□□□ -0.57
TGFBR3-201ENST00000212355 ZNF256Q9Y2P7 627 aaPredicted RBP11.52□□□□□ -0.57
TGFBR3-201ENST00000212355 GREB1Q4ZG55 1949 aa11.51□□□□□ -0.57
TGFBR3-201ENST00000212355 PSME4Q14997 1843 aa11.51□□□□□ -0.57
TGFBR3-201ENST00000212355 TYMSP04818 313 aa11.51□□□□□ -0.57
TGFBR3-201ENST00000212355 SYT8Q8NBV8 401 aa11.51□□□□□ -0.57
TGFBR3-201ENST00000212355 RFNGQ9Y644 331 aa11.51□□□□□ -0.57
TGFBR3-201ENST00000212355 TMEM170BQ5T4T1 132 aa11.51□□□□□ -0.57
TGFBR3-201ENST00000212355 LINC00470Q9BZP3 86 aa11.51□□□□□ -0.57
TGFBR3-201ENST00000212355 CHCHD2Q9Y6H1 151 aaPredicted RBP11.51□□□□□ -0.57
TGFBR3-201ENST00000212355 TRAV14DV4A0A0A6YYC5 116 aa11.51□□□□□ -0.57
TGFBR3-201ENST00000212355 RCC1LQ96I51 464 aaKnown RBP11.51□□□□□ -0.57
TGFBR3-201ENST00000212355 HEATR5BQ9P2D3 2071 aa11.51□□□□□ -0.57
TGFBR3-201ENST00000212355 TAF1LQ8IZX4 1826 aa11.51□□□□□ -0.57
TGFBR3-201ENST00000212355 CD1AP06126 327 aa11.51□□□□□ -0.57
TGFBR3-201ENST00000212355 FOLR2P14207 255 aa11.51□□□□□ -0.57
TGFBR3-201ENST00000212355 EFNB1P98172 346 aa11.51□□□□□ -0.57
TGFBR3-201ENST00000212355 LAMTOR1Q6IAA8 161 aa11.51□□□□□ -0.57
TGFBR3-201ENST00000212355 CLEC19AQ6UXS0 136 aa11.51□□□□□ -0.57
TGFBR3-201ENST00000212355 C12orf77C9JDV5 145 aa11.51□□□□□ -0.57
TGFBR3-201ENST00000212355 TRAV24A0A0B4J272 114 aa11.5□□□□□ -0.57
TGFBR3-201ENST00000212355 GCGP01275 180 aa11.5□□□□□ -0.57
TGFBR3-201ENST00000212355 BSPH1Q075Z2 132 aa11.5□□□□□ -0.57
TGFBR3-201ENST00000212355 CYP2G1PQ6ZSU1 146 aa11.5□□□□□ -0.57
TGFBR3-201ENST00000212355 DEPPQ9NTK1 212 aa11.5□□□□□ -0.57
TGFBR3-201ENST00000212355 AHRRA9YTQ3 701 aa11.5□□□□□ -0.57
TGFBR3-201ENST00000212355 GPR183P32249 361 aa11.5□□□□□ -0.57
TGFBR3-201ENST00000212355 MC5RP33032 325 aa11.5□□□□□ -0.57
TGFBR3-201ENST00000212355 TMEM136Q6ZRR5 245 aa11.5□□□□□ -0.57
TGFBR3-201ENST00000212355 A0A0G2JK05 382 aa11.5□□□□□ -0.57
TGFBR3-201ENST00000212355 LNP1A1A4G5 178 aa11.5□□□□□ -0.57
TGFBR3-201ENST00000212355 CCL3L1P16619 93 aa11.5□□□□□ -0.57
TGFBR3-201ENST00000212355 CDKN1AP38936 164 aa11.5□□□□□ -0.57
TGFBR3-201ENST00000212355 LBHQ53QV2 105 aaPredicted RBP11.5□□□□□ -0.57
TGFBR3-201ENST00000212355 SLC25A34Q6PIV7 304 aa11.5□□□□□ -0.57
TGFBR3-201ENST00000212355 ACP7Q6ZNF0 438 aa11.5□□□□□ -0.57
TGFBR3-201ENST00000212355 PPP1R32Q7Z5V6 425 aa11.5□□□□□ -0.57
TGFBR3-201ENST00000212355 PIMREGQ9BSJ6 248 aa11.5□□□□□ -0.57
TGFBR3-201ENST00000212355 BRWD3Q6RI45 1802 aa11.5□□□□□ -0.57
TGFBR3-201ENST00000212355 C1QTNF9BB2RNN3 333 aa11.5□□□□□ -0.57
TGFBR3-201ENST00000212355 CECR9P0C854 216 aa11.5□□□□□ -0.57
TGFBR3-201ENST00000212355 PDLIM4P50479 330 aa11.5□□□□□ -0.57
TGFBR3-201ENST00000212355 UQCR10Q9UDW1 63 aa11.5□□□□□ -0.57
TGFBR3-201ENST00000212355 PRR32B1ATL7 298 aa11.5□□□□□ -0.57
TGFBR3-201ENST00000212355 HTN3P15516 51 aa11.5□□□□□ -0.57
TGFBR3-201ENST00000212355 ITLN2Q8WWU7 325 aaPredicted RBP11.5□□□□□ -0.57
TGFBR3-201ENST00000212355 MRPL20Q9BYC9 149 aaKnown RBP11.5□□□□□ -0.57
TGFBR3-201ENST00000212355 SYNGR3O43761 229 aa11.49□□□□□ -0.57
TGFBR3-201ENST00000212355 APOHP02749 345 aaPredicted RBP11.49□□□□□ -0.57
TGFBR3-201ENST00000212355 TRGV3P03979 118 aa11.49□□□□□ -0.57
TGFBR3-201ENST00000212355 CDX1P47902 265 aaPredicted RBP11.49□□□□□ -0.57
TGFBR3-201ENST00000212355 FAM71F2Q6NXP2 309 aa11.49□□□□□ -0.57
TGFBR3-201ENST00000212355 RNF115Q9Y4L5 304 aa11.49□□□□□ -0.57
TGFBR3-201ENST00000212355 ASCL2Q99929 193 aa11.49□□□□□ -0.57
TGFBR3-201ENST00000212355 SLC25A28Q96A46 364 aa11.49□□□□□ -0.57
TGFBR3-201ENST00000212355 CLEC7AQ9BXN2 247 aa11.49□□□□□ -0.57
TGFBR3-201ENST00000212355 ICE1Q9Y2F5 2266 aa11.49□□□□□ -0.57
TGFBR3-201ENST00000212355 COX19Q49B96 90 aa11.49□□□□□ -0.57
TGFBR3-201ENST00000212355 LINC00527Q9UJ94 153 aa11.49□□□□□ -0.57
TGFBR3-201ENST00000212355 HLA-DQA1P01909 254 aa11.49□□□□□ -0.57
TGFBR3-201ENST00000212355 EVI2AP22794 236 aa11.49□□□□□ -0.57
TGFBR3-201ENST00000212355 SMIM8Q96KF7 97 aa11.48□□□□□ -0.57
TGFBR3-201ENST00000212355 CABIN1Q9Y6J0 2220 aa11.48□□□□□ -0.57
TGFBR3-201ENST00000212355 IGKV1D-13A0A0B4J2D9 117 aa11.48□□□□□ -0.57
TGFBR3-201ENST00000212355 IGKV1-13P0DP09 117 aa11.48□□□□□ -0.57
TGFBR3-201ENST00000212355 CD69Q07108 199 aa11.48□□□□□ -0.57
TGFBR3-201ENST00000212355 LYZL4Q96KX0 146 aa11.48□□□□□ -0.57
TGFBR3-201ENST00000212355 LSM4Q9Y4Z0 139 aaKnown RBP11.48□□□□□ -0.57
TGFBR3-201ENST00000212355 ALPK2Q86TB3 2170 aa11.48□□□□□ -0.57
TGFBR3-201ENST00000212355 IGHMP01871 453 aa11.48□□□□□ -0.57
TGFBR3-201ENST00000212355 IGHV1-2P23083 117 aa11.48□□□□□ -0.57
TGFBR3-201ENST00000212355 ZNF318Q5VUA4 2279 aa11.48□□□□□ -0.57
TGFBR3-201ENST00000212355 CA1P00915 261 aaPredicted RBP11.48□□□□□ -0.57
TGFBR3-201ENST00000212355 PLPPR1Q8TBJ4 325 aa11.48□□□□□ -0.57
TGFBR3-201ENST00000212355 PKIBQ9C010 78 aa11.48□□□□□ -0.57
TGFBR3-201ENST00000212355 NRXN2Q9P2S2 1712 aa11.48□□□□□ -0.57
TGFBR3-201ENST00000212355 OR10AG1Q8NH19 301 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms