RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 DRAM1Q8N682 238 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 SRSF8Q9BRL6 282 aaKnown RBP5.23□□□□□ -1.57
VPS13D-201ENST00000011700 TRBV20-1A0A075B6N2 111 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 PGPEP1LA6NFU8 196 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 GGTLC3B5MD39 225 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 C1QTNF9P0C862 333 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 PRSS36Q5K4E3 855 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 SSC4DQ8WTU2 575 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 RLN3Q8WXF3 142 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 DNASE2BQ8WZ79 361 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 ALG14Q96F25 216 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 A0A1B0GW64 132 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 CDAP32320 146 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 TRIP6Q15654 476 aaKnown RBP5.23□□□□□ -1.57
VPS13D-201ENST00000011700 TBR1Q16650 682 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 MEIG1Q5JSS6 88 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 ZNF506Q5JVG8 444 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 SSMEM1Q8WWF3 244 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 SHISA4Q96DD7 197 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 CRISPLD2Q9H0B8 497 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 TRAV1-1A0A0B4J248 108 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 HOXA3O43365 443 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-201ENST00000011700 A0A1B0GV90 55 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 FNDC10F2Z333 226 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 H3BMM0 161 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 NDUFB4O95168 129 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 PEX11BO96011 259 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 OR1K1Q8NGR3 316 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 CDIPTO14735 213 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 AGFG2O95081 481 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 EGR1P18146 543 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 MPZP25189 248 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 HOXD3P31249 432 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-201ENST00000011700 SPATA46Q5T0L3 261 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 LINC00052Q96N35 136 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 IL6RP08887 468 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-201ENST00000011700 CXCL3P19876 107 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 LOXL3P58215 753 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-201ENST00000011700 MEGF10Q96KG7 1140 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 SIGMAR1Q99720 223 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 MAGEA5P43359 124 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 OR13C6PQ8NH95 151 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 NEU4Q8WWR8 484 aaPredicted RBP5.22□□□□□ -1.57
VPS13D-201ENST00000011700 LINC00470Q9BZP3 86 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 DLL3Q9NYJ7 618 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 NKX2-6A6NCS4 301 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 CSN3P07498 182 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 OTPQ5XKR4 325 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 RSRP1Q9BUV0 290 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 VSIG8P0DPA2 414 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 PCP4P48539 62 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 CX3CL1P78423 397 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 PSG6Q00889 435 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 PDE6HQ13956 83 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 TMEM240Q5SV17 173 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 NPIPB11E5RHQ5 1161 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 K7EMI3 77 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 SYNGR3O43761 229 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 GFERP55789 205 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 MESP2Q0VG99 397 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 SRSF6Q13247 344 aaKnown RBP5.22□□□□□ -1.57
VPS13D-201ENST00000011700 C2orf68Q2NKX9 166 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 PVRIGQ6DKI7 326 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 A0A1B0GTI1 187 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 PSG2P11465 335 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 SMAD2Q15796 467 aaKnown RBP5.22□□□□□ -1.57
VPS13D-201ENST00000011700 OR11H7Q8NGC8 314 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 ZNF488Q96MN9 340 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 FBLN5Q9UBX5 448 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 LY96Q9Y6Y9 160 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 ATXN8Q156A1 80 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 ZNF703Q9H7S9 590 aaPredicted RBP5.22□□□□□ -1.57
VPS13D-201ENST00000011700 CDC42EP2O14613 210 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 ZNF883P0CG24 379 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 GLRXP35754 106 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 ZFP36L2P47974 494 aaKnown RBP5.22□□□□□ -1.57
VPS13D-201ENST00000011700 GNG10P50151 68 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 NXPH1P58417 271 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 CCL7P80098 99 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 ZNF683Q8IZ20 524 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 DOK4Q8TEW6 326 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 TM2D1Q9BX74 207 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 IL36BQ9NZH7 164 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 C3orf80F5H4A9 247 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 LIMS1P48059 325 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 ZXDCQ2QGD7 858 aaPredicted RBP5.22□□□□□ -1.57
VPS13D-201ENST00000011700 TMEM91Q6ZNR0 172 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 LINC00518Q8N0U6 118 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 C1QTNF4Q9BXJ3 329 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 IL17BQ9UHF5 180 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 R4GN57 208 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 NEGR1Q7Z3B1 354 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 LYPD1Q8N2G4 141 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 FGF11Q92914 225 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 PGPEP1Q9NXJ5 209 aa5.22□□□□□ -1.57
VPS13D-201ENST00000011700 TRBV20OR9-2A0A075B6H5 130 aa5.21□□□□□ -1.57
VPS13D-201ENST00000011700 HAX1O00165 279 aa5.21□□□□□ -1.57
VPS13D-201ENST00000011700 Q5PR19 223 aa5.21□□□□□ -1.57
VPS13D-201ENST00000011700 SLC16A13Q7RTY0 426 aa5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms