RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Hide1Q75VT8 222 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 Osbpl11Q8CI95 751 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 Scgb2b26Q8JZX1 112 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 PipoxQ9D826 390 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 Ccdc54Q9DAL3 329 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 Muc13P19467 573 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 UngP97931 306 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 Slc2a9Q3T9X0 538 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 Olfr91Q7TRL3 312 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 Olfr452Q7TRV8 317 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 Atpaf1Q811I0 324 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 Ahsa1Q8BK64 338 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 0610009B22RikQ8R3W2 140 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 Spsb4Q8R5B6 273 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 Dusp18Q8VE01 188 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 Olfr38Q8VGP4 317 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 Plxdc1Q91ZV7 500 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 Ykt6Q9CQW1 198 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 Lipt2Q9D009 231 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 Olfr157Q9QZ20 318 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 Timm8a1Q9WVA2 97 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 Gvin1Q80SU7 2427 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 Gm12355A2A4X6 163 aa13.42□□□□□ -0.26
Trim39-203ENSMUST00000113706 Cldn34dA2AGU5 210 aa13.42□□□□□ -0.26
Trim39-203ENSMUST00000113706 Rabl2E9Q9D5 223 aa13.42□□□□□ -0.26
Trim39-203ENSMUST00000113706 Gm3573L7N292 184 aa13.42□□□□□ -0.26
Trim39-203ENSMUST00000113706 Fgf4P11403 202 aa13.42□□□□□ -0.26
Trim39-203ENSMUST00000113706 SellP18337 372 aa13.42□□□□□ -0.26
Trim39-203ENSMUST00000113706 Wnt2P21552 360 aa13.42□□□□□ -0.26
Trim39-203ENSMUST00000113706 Rpl12P35979 165 aaKnown RBP13.42□□□□□ -0.26
Trim39-203ENSMUST00000113706 Cbr1P48758 277 aa13.42□□□□□ -0.26
Trim39-203ENSMUST00000113706 Srsf3P84104 164 aaKnown RBP13.42□□□□□ -0.26
Trim39-203ENSMUST00000113706 Vmn1r36Q8R2E3 305 aa13.42□□□□□ -0.26
Trim39-203ENSMUST00000113706 Tlcd2Q8VC26 310 aa13.42□□□□□ -0.26
Trim39-203ENSMUST00000113706 Rnf141Q99MB7 230 aa13.42□□□□□ -0.26
Trim39-203ENSMUST00000113706 Pcnx2Q5DU28 2122 aa13.42□□□□□ -0.26
Trim39-203ENSMUST00000113706 Ahctf1Q8CJF7 2243 aaKnown RBP13.42□□□□□ -0.26
Trim39-203ENSMUST00000113706 Trav6n-7A0A075B6A6 116 aa13.42□□□□□ -0.26
Trim39-203ENSMUST00000113706 Saa1P05366 122 aa13.42□□□□□ -0.26
Trim39-203ENSMUST00000113706 Tmprss13Q5U405 543 aa13.42□□□□□ -0.26
Trim39-203ENSMUST00000113706 Smap2Q7TN29 428 aa13.42□□□□□ -0.26
Trim39-203ENSMUST00000113706 Srsf7Q8BL97 267 aaKnown RBP13.42□□□□□ -0.26
Trim39-203ENSMUST00000113706 Timm21Q8CCM6 249 aa13.42□□□□□ -0.26
Trim39-203ENSMUST00000113706 Dmrta1Q8CFG4 490 aa13.42□□□□□ -0.26
Trim39-203ENSMUST00000113706 Tmem56Q8CGF5 276 aa13.42□□□□□ -0.26
Trim39-203ENSMUST00000113706 Prss28Q924N9 274 aa13.42□□□□□ -0.26
Trim39-203ENSMUST00000113706 Pm20d2A3KG59 431 aa13.41□□□□□ -0.26
Trim39-203ENSMUST00000113706 Olfr1496B9EHG2 317 aa13.41□□□□□ -0.26
Trim39-203ENSMUST00000113706 Gm4950D3YUM8 205 aa13.41□□□□□ -0.26
Trim39-203ENSMUST00000113706 Igsf11P0C673 428 aa13.41□□□□□ -0.26
Trim39-203ENSMUST00000113706 MENTQ569E4 350 aa13.41□□□□□ -0.26
Trim39-203ENSMUST00000113706 Lhfpl4Q5U4E0 247 aa13.41□□□□□ -0.26
Trim39-203ENSMUST00000113706 Scarb1Q61009 509 aa13.41□□□□□ -0.26
Trim39-203ENSMUST00000113706 Tmem106cQ80VP8 260 aa13.41□□□□□ -0.26
Trim39-203ENSMUST00000113706 Slc25a16Q8C0K5 332 aa13.41□□□□□ -0.26
Trim39-203ENSMUST00000113706 Degs2Q8R2F2 323 aa13.41□□□□□ -0.26
Trim39-203ENSMUST00000113706 Ergic1Q9DC16 290 aaKnown RBP13.41□□□□□ -0.26
Trim39-203ENSMUST00000113706 Olfr122W4VSP0 330 aa13.41□□□□□ -0.26
Trim39-203ENSMUST00000113706 Trav5-1A0A075B5Z7 114 aa13.41□□□□□ -0.26
Trim39-203ENSMUST00000113706 Ighv6-5A0A0A6YWS9 119 aa13.41□□□□□ -0.26
Trim39-203ENSMUST00000113706 Vmn1r5B2RQT2 315 aa13.41□□□□□ -0.26
Trim39-203ENSMUST00000113706 Amy2a1E9PV85 245 aa13.41□□□□□ -0.26
Trim39-203ENSMUST00000113706 Olfr628K7N6B2 316 aa13.41□□□□□ -0.26
Trim39-203ENSMUST00000113706 Srp9P49962 86 aa13.41□□□□□ -0.26
Trim39-203ENSMUST00000113706 Olfr1000Q7TR99 314 aa13.41□□□□□ -0.26
Trim39-203ENSMUST00000113706 Olfr1427Q8VFU9 311 aa13.41□□□□□ -0.26
Trim39-203ENSMUST00000113706 Arl13aQ9D416 372 aa13.41□□□□□ -0.26
Trim39-203ENSMUST00000113706 Timm9Q9WV98 89 aaKnown RBP13.41□□□□□ -0.26
Trim39-203ENSMUST00000113706 Myo9bQ9QY06 2114 aa13.41□□□□□ -0.26
Trim39-203ENSMUST00000113706 Ldlrad3A2AR95 345 aa13.41□□□□□ -0.26
Trim39-203ENSMUST00000113706 Hyal2O35632 473 aa13.41□□□□□ -0.26
Trim39-203ENSMUST00000113706 Traf4Q61382 470 aa13.41□□□□□ -0.26
Trim39-203ENSMUST00000113706 Tmem33Q9CR67 247 aa13.41□□□□□ -0.26
Trim39-203ENSMUST00000113706 Defb3Q9WTL0 63 aa13.41□□□□□ -0.26
Trim39-203ENSMUST00000113706 Olfr175-ps1A0A140T8K4 308 aa13.4□□□□□ -0.26
Trim39-203ENSMUST00000113706 Gm16368A0A1Y7VNG9 144 aa13.4□□□□□ -0.26
Trim39-203ENSMUST00000113706 Vmn1r204I7HIK1 302 aa13.4□□□□□ -0.26
Trim39-203ENSMUST00000113706 Siva1O54926 175 aa13.4□□□□□ -0.26
Trim39-203ENSMUST00000113706 Gm5127Q3UQH6 212 aa13.4□□□□□ -0.26
Trim39-203ENSMUST00000113706 TrmoQ562D6 431 aa13.4□□□□□ -0.26
Trim39-203ENSMUST00000113706 Dhrs9Q58NB6 319 aa13.4□□□□□ -0.26
Trim39-203ENSMUST00000113706 Zfp948Q6DFU8 667 aa13.4□□□□□ -0.26
Trim39-203ENSMUST00000113706 Trib1Q8K4K4 372 aa13.4□□□□□ -0.26
Trim39-203ENSMUST00000113706 Olfr1298Q8VGE6 312 aa13.4□□□□□ -0.26
Trim39-203ENSMUST00000113706 Fbxo36Q9CQ24 188 aa13.4□□□□□ -0.26
Trim39-203ENSMUST00000113706 CenpeQ6RT24 2474 aaKnown RBP13.4□□□□□ -0.26
Trim39-203ENSMUST00000113706 Olfr102B2RT33 308 aa13.4□□□□□ -0.26
Trim39-203ENSMUST00000113706 Lrp3E9Q1T6 790 aa13.4□□□□□ -0.26
Trim39-203ENSMUST00000113706 4933408B17RikG3X9B4 273 aa13.4□□□□□ -0.26
Trim39-203ENSMUST00000113706 Gm4778L7N229 365 aa13.4□□□□□ -0.26
Trim39-203ENSMUST00000113706 Taar9Q5QD04 348 aa13.4□□□□□ -0.26
Trim39-203ENSMUST00000113706 Krt33bQ61897 404 aa13.4□□□□□ -0.26
Trim39-203ENSMUST00000113706 AtcayQ8BHE3 372 aa13.4□□□□□ -0.26
Trim39-203ENSMUST00000113706 Vmn1r211Q8R266 298 aa13.4□□□□□ -0.26
Trim39-203ENSMUST00000113706 Olfr101Q920Z0 308 aa13.4□□□□□ -0.26
Trim39-203ENSMUST00000113706 TollipQ9QZ06 274 aa13.4□□□□□ -0.26
Trim39-203ENSMUST00000113706 Zfp982A2A8Q4 368 aa13.39□□□□□ -0.27
Trim39-203ENSMUST00000113706 Olfr1337A2ACY8 315 aa13.39□□□□□ -0.27
Trim39-203ENSMUST00000113706 Gm14403A2BFU4 402 aa13.39□□□□□ -0.27
Trim39-203ENSMUST00000113706 RnlsA7RDN6 342 aa13.39□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 41.5 ms