RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 H3f3aP84244 136 aaKnown RBP7.57□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Tnfaip8l3Q3TBL6 204 aa7.57□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Gm10644Q3TZG3 87 aa7.57□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Prss46Q5M8S2 314 aa7.57□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Q5SPV6 233 aa7.57□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Slc17a5Q8BN82 495 aa7.57□□□□□ -1.2
Upf3b-201ENSMUST00000076265 BmperQ8CJ69 685 aa7.57□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Olfr1228Q8VGM9 323 aa7.57□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Fam19a5Q91WE9 132 aa7.57□□□□□ -1.2
Upf3b-201ENSMUST00000076265 4931428L18RikQ9D4S9 127 aa7.57□□□□□ -1.2
Upf3b-201ENSMUST00000076265 MylkQ6PDN3 1941 aaKnown RBP7.57□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Ighv6-3A0A075B5T2 118 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Cldn34dA2AGU5 210 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Snx3O70492 162 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Irf2P23906 349 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Rps25P62852 125 aaKnown RBP7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 UngP97931 306 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Scgb1a1Q06318 96 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Slc25a33Q3TZX3 320 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Cd300lbQ3U497 209 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Spin1Q61142 262 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Olfr1133Q7TR44 313 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Olfr1013Q7TR96 305 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Olfr851Q7TRG0 312 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Olfr304Q7TS03 333 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Agfg2Q80WC7 479 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Angptl6Q8R0Z6 457 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Ubac2Q8R1K1 345 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Wdsub1Q9D0I6 474 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Rps6kb2Q9Z1M4 485 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Fthl17cA2AHC6 176 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Olfr373E9Q4J3 314 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Cldn20G5E8X0 219 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Ca1P13634 261 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 OstnP61364 130 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Rps28P62858 69 aaKnown RBP7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Olfr331Q5NC44 324 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Shc3Q61120 474 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 EdnraQ61614 427 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Klk1b24Q61754 263 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Zfp975Q6NVD6 525 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Gramd2bQ6PEM6 445 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Olfr1321Q7TQW4 319 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Olfr745Q7TRL9 328 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Olfr372Q7TRY2 314 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Serinc5Q8BHJ6 461 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Lpar6Q8BMC0 344 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Tmem129Q8K304 362 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 FRRS1Q8K385 592 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Bloc1s5Q8R015 185 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Vmn1r218Q8R261 298 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Mrpl57Q9CQF8 102 aaKnown RBP7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Trappc6bQ9D289 158 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 C1ql3Q9ESN4 255 aa7.56□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Trav16nA0A075B634 117 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Trav3-4A0A075B654 114 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Ighv1-19A0A0A6YWX0 117 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Gm42372A0A1B0GT27 204 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Ckap5A2AGT5 2032 aaKnown RBP7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Gm436B1AVU6 407 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Gm16519F8VQK7 162 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Smim22J3QP37 91 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Foxf2O54743 446 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Hbb-yP02104 147 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 HbzP06467 142 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 P0C913 63 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Ccl4P14097 92 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Fgf8P37237 268 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Dpcr1Q3TNW5 500 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 CrhbpQ60571 322 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Olfr140Q60878 302 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Znf354aQ61751 572 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Spa17Q62252 149 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 St6gal2Q76K27 524 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 NaprtQ8CC86 538 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Cmtm4Q8CJ61 208 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 CcsapQ8QZT2 252 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Olfr828Q8VFM8 312 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Mrgprb5Q91ZB9 322 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Trav16A0A075B653 116 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Gm28171A0A087WQ19 227 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Aadacl3A2A7Z8 408 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Vmn2r91E9Q2U5 856 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Gm14408E9Q6B9 136 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Vmn2r10K7N621 847 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Brs3O54798 399 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 P01812 117 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Aqp4P55088 323 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Tas2r123P59528 333 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Gabra1P62812 455 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Rgs16P97428 201 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Slc9b2Q5BKR2 547 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Tas2r110Q7M712 333 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Olfr871Q7TRF0 311 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Prrg4Q8BGN6 226 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Taf15Q8BQ46 557 aaKnown RBP7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Tmem72Q8C3K5 275 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Vmn1r217Q8R270 298 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Olfr720Q8VF37 316 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Olfr870Q8VGG4 311 aa7.55□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 43.8 ms