RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Glrx2Q923X4 156 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Ackr1Q9QUI6 334 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Vmn1r127K7N6J5 305 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr1272Q8VGN8 308 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Xcr1Q9R0M1 322 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Dnajc30P59041 219 aa10.58□□□□□ -0.71
Trim56-201ENSMUST00000054384 Pmis2Q497Q9 96 aa10.58□□□□□ -0.71
Trim56-201ENSMUST00000054384 Znf2Q8BIQ3 427 aa10.58□□□□□ -0.71
Trim56-201ENSMUST00000054384 Sval2Q99N75 144 aa10.58□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm6812B1AXU1 112 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Gm9857F7CXR1 130 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Scgb1b3J3QJY4 93 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 1700020N15RikL7MTX3 112 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Q3UZV7 1028 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Sap30lQ5SQF8 182 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Plppr2Q8VCY8 343 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Gorasp2Q99JX3 451 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 BglapP86546 95 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Bglap2P86547 95 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Rasl12Q08AT1 266 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Med12lQ8BQM9 2157 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Ntsr1O88319 424 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Gm11492Q5ND19 536 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 DctdQ8K2D6 178 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Srsf9Q9D0B0 222 aaKnown RBP10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Lyzl6Q9DA11 148 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Gab2Q9Z1S8 665 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Omt2bD3YX29 119 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Hist1h2baP70696 127 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Treml2Q2LA85 329 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 HaaoQ78JT3 286 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Ms4a3Q920C4 213 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Nubp1Q9R060 320 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Vax2Q9WTP9 292 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Tmem251Q8BH26 163 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Clec2hQ8C1T8 218 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 TapbpQ9R233 465 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Actl6aQ9Z2N8 429 aaKnown RBP10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Col11a2Q64739 1736 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Gm4133K9J7G6 307 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Smad4P97471 551 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Defa24Q5G865 93 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Dhrs13Q5SS80 376 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Ankrd10Q99LW0 415 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Sdf2Q9DCT5 211 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Olfr823Q7TRH2 315 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Ammecr1lQ8JZZ6 310 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Fbxl17Q9QZN1 701 aa10.58□□□□□ -0.72
Trim56-201ENSMUST00000054384 Npy4rQ61041 375 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Wfikkn1Q8R0S6 552 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Olfr1441Q8VFV3 318 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Slc25a2Q99ML6 265 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Gm8882E9Q7E4 283 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 GastP48757 101 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Slc17a2Q5SZA1 478 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Ppp1r3cQ7TMB3 317 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Olfr1356Q7TQU8 320 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Sh2d5Q8JZW5 429 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 1700029F12RikQ9CRB4 147 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Igkv5-45A0A0B4J1J1 115 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Gm4884E9PVP9 694 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 MyadmO35682 320 aaKnown RBP10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Hspb8Q9JK92 196 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Opn4Q9QXZ9 521 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 1700025C18RikA2A580 89 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Vmn1r175K7N6T9 304 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Gfra3O35118 397 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Fam174bQ8K064 153 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Tmeff2Q9QYM9 374 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Spint2Q9WU03 252 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Brwd3A2AHJ4 1799 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Gm19410A0A140LJC7 2098 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Cd74P04441 279 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Cd200r3Q5UKY4 296 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Inca1Q6PKN7 231 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Nsun3Q8CCT7 348 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 FetubQ9QXC1 388 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Olfr902E9Q6Z7 309 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Egfbp2P36368 261 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 FstP47931 344 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Znf48Q3US17 591 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 B130006D01RikQ8BRH6 153 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Pxmp4Q9JJW0 212 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Zdhhc22A0PK84 263 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Khdc1bP0C7A0 126 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Col8a1Q00780 744 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Lrrc52Q5M8M9 314 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Rtp2Q80ZI2 223 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Tceal5Q8CCT4 200 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 P2rx4Q9JJX6 388 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Il36aQ9JLA2 160 aa10.57□□□□□ -0.72
Trim56-201ENSMUST00000054384 Ighv6-6A0A075B5T3 119 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Sap25Q1EHW4 186 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Mrpl24Q9CQ06 216 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Tcrg-V7A0A0A6YYE8 116 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Igkv7-33P01632 114 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Plpp1Q61469 283 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Try10Q792Z1 246 aaKnown RBP10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Olfr982Q8VGB3 321 aa10.56□□□□□ -0.72
Trim56-201ENSMUST00000054384 Nudt16l1Q8VHN8 211 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 47.2 ms