RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Tmem52bQ0VBF2 186 aa10.27□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Tmem171Q4KL18 322 aa10.27□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Olfr94Q6UAH0 386 aa10.27□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Olfr1170Q8VFG1 316 aa10.27□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Olfr837Q8VFJ4 312 aa10.27□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Olfr1238Q8VG59 315 aa10.27□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Prss37Q9DAA4 237 aa10.27□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Mpig6bD7PDD4 242 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Slc7a15Q50E62 488 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Tex261Q62302 196 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 ArsjQ8BM89 598 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Mmp28Q8CGV8 520 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 AspaQ8R3P0 312 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Rab40cQ8VHQ4 281 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Rep15Q9D7T1 230 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Sh2d2aQ9QXK9 374 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Ascc3E9PZJ8 2198 aaKnown RBP10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Ifna5P07349 189 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Hnf1aP22361 628 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Chrna7P49582 502 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Lhfpl4Q5U4E0 247 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Flrt1Q6RKD8 674 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 LmlnQ8BMN4 681 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Ociad1Q9CRD0 247 aaKnown RBP10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 PaplnQ9EPX2 1280 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Cited4Q9WUL8 182 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Ighv4-1A0A075B5R5 116 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 A0A286YDM5 308 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Sap30lQ5SQF8 182 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 C030005K15RikQ8BQN9 115 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 9030612E09RikQ8CE20 140 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Cela3bQ9CQ52 269 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Eml5Q8BQM8 1977 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Slco5a1E9PVD9 850 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Stfa1P35175 97 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 GastP48757 101 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Fabp7P51880 132 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 MlanaQ2TA50 113 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Fndc4Q3TR08 231 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Slc35e1Q8CD26 409 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Vmn1r73Q8R293 303 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Sco2Q8VCL2 255 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Olfr362Q8VGV7 317 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 HpxQ91X72 460 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Lamtor1Q9CQ22 161 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Nhp2Q9CRB2 153 aaKnown RBP10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Plxnd1Q3UH93 1925 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Wfdc11A2A5H7 82 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Serf1O88892 62 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Pdlim4P70271 330 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Znhit1Q8R331 154 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Olfr1086Q8VFL9 310 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Tmem70Q921N7 253 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Tmprss2Q9JIQ8 490 aa10.26□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Prss47A0A0N4SVQ0 395 aa10.25□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Smug1Q6P5C5 279 aa10.25□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Ccsmst1Q6RUT7 136 aa10.25□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Zfp955aQ80XR7 545 aa10.25□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Klre1Q8CJC7 226 aa10.25□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Nit1Q8VDK1 323 aa10.25□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Olfr507Q8VG13 316 aa10.25□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Nup37Q9CWU9 326 aa10.25□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Ttc32Q9DAC7 148 aa10.25□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Dennd4aE9Q8V6 1869 aa10.25□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Lrp3E9Q1T6 790 aa10.25□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Ankrd33bQ3U0L2 486 aa10.25□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Cd96Q3U0X8 602 aa10.25□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Ifna16Q810G1 189 aa10.25□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Pusl1A2ADA5 291 aa10.25□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Fgf7P36363 194 aa10.25□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Ube2g1P62254 170 aa10.25□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Q80W69 301 aa10.25□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Chrdl1Q920C1 447 aa10.25□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Vgll1Q99NC0 307 aa10.25□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Angptl4Q9Z1P8 410 aa10.25□□□□□ -0.77
Pcif1-201ENSMUST00000041643 S100a10P08207 97 aa10.25□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Ankrd34cQ8BLB8 534 aa10.25□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Klk14Q8CGR5 250 aa10.25□□□□□ -0.77
Pcif1-201ENSMUST00000041643 SrrdQ8K2M3 249 aa10.25□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Slc50a1Q9CXK4 221 aa10.25□□□□□ -0.77
Pcif1-201ENSMUST00000041643 4930447A16RikQ9D5F6 132 aa10.25□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Vmn1r61W4VSP5 300 aa10.25□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Btbd35f23A0A0R4J2B9 498 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Zfp362B1ASA5 418 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Gm11027G8JL69 66 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Tctn2Q2MV57 700 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 6430531B16RikQ3V2J1 307 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Spem1Q5F289 310 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Olfr1472Q7TQQ9 314 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Psg16Q8K0U8 395 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Prss8Q9ESD1 342 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Lhx2Q9Z0S2 406 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Cacna1bO55017 2327 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Ighv14-3A0A075B5R9 117 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Olfr1158A2BHP7 313 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Igk-V19-17P01633 149 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Ier3P46694 153 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Ppp1ccP63087 323 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Pla2g5P97391 137 aa10.24□□□□□ -0.77
Pcif1-201ENSMUST00000041643 Nkpd1Q0VF94 599 aa10.24□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 37.2 ms