RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 TCF19Q9Y242 345 aa14.02□□□□□ -0.17
PHGDH-211ENST00000641213 LINC00312Q9Y6C7 94 aa14.02□□□□□ -0.17
PHGDH-211ENST00000641213 TRAV38-1A0A0B4J264 116 aa14.01□□□□□ -0.17
PHGDH-211ENST00000641213 C15orf61A6NNL5 157 aa14.01□□□□□ -0.17
PHGDH-211ENST00000641213 RBMS3Q6XE24 437 aaKnown RBP14.01□□□□□ -0.17
PHGDH-211ENST00000641213 ZCCHC14Q8WYQ9 949 aaKnown RBP14.01□□□□□ -0.17
PHGDH-211ENST00000641213 MALSU1Q96EH3 234 aa14.01□□□□□ -0.17
PHGDH-211ENST00000641213 ACTR3CQ9C0K3 210 aaPredicted RBP14.01□□□□□ -0.17
PHGDH-211ENST00000641213 SAP30LQ9HAJ7 183 aa14.01□□□□□ -0.17
PHGDH-211ENST00000641213 SLC25A10Q9UBX3 287 aaPredicted RBP14.01□□□□□ -0.17
PHGDH-211ENST00000641213 PRSS46E5RG02 174 aa14□□□□□ -0.17
PHGDH-211ENST00000641213 LINC00518Q8N0U6 118 aa14□□□□□ -0.17
PHGDH-211ENST00000641213 ABHD12Q8N2K0 398 aa14□□□□□ -0.17
PHGDH-211ENST00000641213 TMEM170AQ8WVE7 144 aa14□□□□□ -0.17
PHGDH-211ENST00000641213 RND1Q92730 232 aa14□□□□□ -0.17
PHGDH-211ENST00000641213 CEP295Q9C0D2 2601 aa14□□□□□ -0.17
PHGDH-211ENST00000641213 PTPRQQ9UMZ3 2332 aa14□□□□□ -0.17
PHGDH-211ENST00000641213 POLEQ07864 2286 aa14□□□□□ -0.17
PHGDH-211ENST00000641213 TRGV8A0A0C4DH27 118 aa14□□□□□ -0.17
PHGDH-211ENST00000641213 FCN3O75636 299 aa14□□□□□ -0.17
PHGDH-211ENST00000641213 FAM87AP0C7U9 286 aa14□□□□□ -0.17
PHGDH-211ENST00000641213 HOXA1P49639 335 aaPredicted RBP14□□□□□ -0.17
PHGDH-211ENST00000641213 RAB24Q969Q5 203 aa14□□□□□ -0.17
PHGDH-211ENST00000641213 TMEM14BQ9NUH8 114 aa14□□□□□ -0.17
PHGDH-211ENST00000641213 ARFGEF3Q5TH69 2177 aa13.99□□□□□ -0.17
PHGDH-211ENST00000641213 TMEM178BH3BS89 294 aa13.99□□□□□ -0.17
PHGDH-211ENST00000641213 CD81P60033 236 aa13.99□□□□□ -0.17
PHGDH-211ENST00000641213 ERVFRD-1P60508 538 aa13.99□□□□□ -0.17
PHGDH-211ENST00000641213 MEF2BQ02080 365 aaPredicted RBP13.99□□□□□ -0.17
PHGDH-211ENST00000641213 GGACTQ9BVM4 153 aa13.99□□□□□ -0.17
PHGDH-211ENST00000641213 ZNRD1Q9P1U0 126 aa13.99□□□□□ -0.17
PHGDH-211ENST00000641213 FOXA2Q9Y261 457 aaPredicted RBP13.99□□□□□ -0.17
PHGDH-211ENST00000641213 PPIAL4EA0A075B759 164 aa13.99□□□□□ -0.17
PHGDH-211ENST00000641213 B4DEV8 164 aa13.99□□□□□ -0.17
PHGDH-211ENST00000641213 PPIAL4DF5H284 164 aa13.99□□□□□ -0.17
PHGDH-211ENST00000641213 CT45A6P0DMU7 189 aa13.99□□□□□ -0.17
PHGDH-211ENST00000641213 CT45A5P0DMU8 189 aa13.99□□□□□ -0.17
PHGDH-211ENST00000641213 CT45A7P0DMV0 189 aa13.99□□□□□ -0.17
PHGDH-211ENST00000641213 PPIAL4FP0DN26 164 aa13.99□□□□□ -0.17
PHGDH-211ENST00000641213 DEFA4P12838 97 aa13.99□□□□□ -0.17
PHGDH-211ENST00000641213 TMPRSS3P57727 454 aa13.99□□□□□ -0.17
PHGDH-211ENST00000641213 RBPJQ06330 500 aa13.99□□□□□ -0.17
PHGDH-211ENST00000641213 MEF2CQ06413 473 aaPredicted RBP13.99□□□□□ -0.17
PHGDH-211ENST00000641213 POU2AF1Q16633 256 aa13.99□□□□□ -0.17
PHGDH-211ENST00000641213 TREML4Q6UXN2 200 aa13.99□□□□□ -0.17
PHGDH-211ENST00000641213 HEPN1Q6WQI6 88 aa13.99□□□□□ -0.17
PHGDH-211ENST00000641213 C1orf87Q8N0U7 546 aa13.99□□□□□ -0.17
PHGDH-211ENST00000641213 SIRT7Q9NRC8 400 aa13.99□□□□□ -0.17
PHGDH-211ENST00000641213 PPIAL4AQ9Y536 164 aa13.99□□□□□ -0.17
PHGDH-211ENST00000641213 SMG1Q96Q15 3661 aaKnown RBP13.98□□□□□ -0.17
PHGDH-211ENST00000641213 SMCO3A2RU48 225 aa13.98□□□□□ -0.17
PHGDH-211ENST00000641213 SHISA9B4DS77 424 aa13.98□□□□□ -0.17
PHGDH-211ENST00000641213 CYB5BO43169 146 aa13.98□□□□□ -0.17
PHGDH-211ENST00000641213 HRASP01112 189 aa13.98□□□□□ -0.17
PHGDH-211ENST00000641213 RPL35P42766 123 aaKnown RBP13.98□□□□□ -0.17
PHGDH-211ENST00000641213 AKR1D1P51857 326 aa13.98□□□□□ -0.17
PHGDH-211ENST00000641213 HSPE1P61604 102 aaKnown RBP13.98□□□□□ -0.17
PHGDH-211ENST00000641213 SNRPEP62304 92 aaKnown RBP13.98□□□□□ -0.17
PHGDH-211ENST00000641213 RPL31P62899 125 aaKnown RBP13.98□□□□□ -0.17
PHGDH-211ENST00000641213 PNRC1Q12796 327 aaPredicted RBP13.98□□□□□ -0.17
PHGDH-211ENST00000641213 ACOT6Q3I5F7 207 aaPredicted RBP13.98□□□□□ -0.17
PHGDH-211ENST00000641213 WDR25Q64LD2 544 aaPredicted RBP13.98□□□□□ -0.17
PHGDH-211ENST00000641213 OR10A7Q8NGE5 316 aa13.98□□□□□ -0.17
PHGDH-211ENST00000641213 RNASE6Q93091 150 aaKnown RBP13.98□□□□□ -0.17
PHGDH-211ENST00000641213 GAL3ST2Q9H3Q3 398 aa13.98□□□□□ -0.17
PHGDH-211ENST00000641213 SDF2L1Q9HCN8 221 aa13.98□□□□□ -0.17
PHGDH-211ENST00000641213 PKDREJQ9NTG1 2253 aa13.97□□□□□ -0.17
PHGDH-211ENST00000641213 CXorf65A6NEN9 183 aa13.97□□□□□ -0.17
PHGDH-211ENST00000641213 VSTM5A8MXK1 200 aa13.97□□□□□ -0.17
PHGDH-211ENST00000641213 MPDU1O75352 247 aa13.97□□□□□ -0.17
PHGDH-211ENST00000641213 PSMB3P49720 205 aa13.97□□□□□ -0.17
PHGDH-211ENST00000641213 ELOBQ15370 118 aa13.97□□□□□ -0.17
PHGDH-211ENST00000641213 ZNF343Q6P1L6 599 aa13.97□□□□□ -0.17
PHGDH-211ENST00000641213 DMRTC2Q8IXT2 367 aaPredicted RBP13.97□□□□□ -0.17
PHGDH-211ENST00000641213 GATAD1Q8WUU5 269 aa13.97□□□□□ -0.17
PHGDH-211ENST00000641213 CCL17Q92583 94 aa13.97□□□□□ -0.17
PHGDH-211ENST00000641213 VKORC1Q9BQB6 163 aa13.97□□□□□ -0.17
PHGDH-211ENST00000641213 MS4A5Q9H3V2 200 aa13.97□□□□□ -0.17
PHGDH-211ENST00000641213 NGBQ9NPG2 151 aa13.97□□□□□ -0.17
PHGDH-211ENST00000641213 TMEM106BQ9NUM4 274 aa13.97□□□□□ -0.17
PHGDH-211ENST00000641213 TNCP24821 2201 aa13.97□□□□□ -0.17
PHGDH-211ENST00000641213 TNFRSF13BO14836 293 aaPredicted RBP13.97□□□□□ -0.17
PHGDH-211ENST00000641213 IL6RP08887 468 aaPredicted RBP13.97□□□□□ -0.17
PHGDH-211ENST00000641213 CDC34P49427 236 aaPredicted RBP13.97□□□□□ -0.17
PHGDH-211ENST00000641213 NCMAPQ5T1S8 102 aa13.97□□□□□ -0.17
PHGDH-211ENST00000641213 Q8WTZ3 238 aa13.97□□□□□ -0.17
PHGDH-211ENST00000641213 NEUROG1Q92886 237 aa13.97□□□□□ -0.17
PHGDH-211ENST00000641213 COL25A1Q9BXS0 654 aaPredicted RBP13.97□□□□□ -0.17
PHGDH-211ENST00000641213 MANBALQ9NQG1 85 aa13.97□□□□□ -0.17
PHGDH-211ENST00000641213 SEC14L6B5MCN3 397 aa13.96□□□□□ -0.17
PHGDH-211ENST00000641213 E7EQL1 145 aa13.96□□□□□ -0.17
PHGDH-211ENST00000641213 IGKV1-16P04430 117 aa13.96□□□□□ -0.17
PHGDH-211ENST00000641213 IFNA4P05014 189 aa13.96□□□□□ -0.17
PHGDH-211ENST00000641213 MYOD1P15172 320 aa13.96□□□□□ -0.17
PHGDH-211ENST00000641213 CCL3L1P16619 93 aa13.96□□□□□ -0.17
PHGDH-211ENST00000641213 GCSAMLQ5JQS6 135 aa13.96□□□□□ -0.17
PHGDH-211ENST00000641213 TMEM200BQ69YZ2 307 aa13.96□□□□□ -0.17
PHGDH-211ENST00000641213 LYPD2Q6UXB3 125 aa13.96□□□□□ -0.17
PHGDH-211ENST00000641213 OR13D1Q8NGV5 346 aa13.96□□□□□ -0.17
PHGDH-211ENST00000641213 ZNF714Q96N38 554 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms