RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 TMEM238C9JI98 176 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 TSTD3H0UI37 97 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 KCNK1O00180 336 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 PSMD12O00232 456 aaPredicted RBP1.33□□□□□ -2.2
CCDC7-216ENST00000640058 BIRC5O15392 142 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 PFDN1O60925 122 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 DCTN3O75935 186 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 IFNA21P01568 189 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 ISG15P05161 165 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 P0DMU3 169 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 FAM231AP0DMU4 169 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 FAM231CP0DMU5 169 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 COX5BP10606 129 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 CD36P16671 472 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 CXCL2P19875 107 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 CRHBPP24387 322 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 TAS2R45P59539 299 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 BTN3A2P78410 334 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 CCL7P80098 99 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 FABP5Q01469 135 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 SRSF6Q13247 344 aaKnown RBP1.33□□□□□ -2.2
CCDC7-216ENST00000640058 POU6F1Q14863 301 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 EBPQ15125 230 aaKnown RBP1.33□□□□□ -2.2
CCDC7-216ENST00000640058 ACSM3Q53FZ2 586 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 BRMS1LQ5PSV4 323 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.33□□□□□ -2.2
CCDC7-216ENST00000640058 PXT1Q8NFP0 134 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 Q8WTZ3 238 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 PTH2Q96A98 100 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 TESCQ96BS2 214 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 ZHX1-C8orf76Q96EF9 292 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 BTF3L4Q96K17 158 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 CCDC90BQ9GZT6 254 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 SPANXA1Q9NS26 97 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 ARMC1Q9NVT9 282 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 FAM215AQ9Y5M1 114 aa1.33□□□□□ -2.2
CCDC7-216ENST00000640058 MALRD1Q5VYJ5 2156 aa1.32□□□□□ -2.2
CCDC7-216ENST00000640058 THSD7AQ9UPZ6 1657 aa1.32□□□□□ -2.2
CCDC7-216ENST00000640058 C9orf84Q5VXU9 1444 aa1.32□□□□□ -2.2
CCDC7-216ENST00000640058 ADGRL3Q9HAR2 1447 aa1.32□□□□□ -2.2
CCDC7-216ENST00000640058 ERCC6Q03468 1493 aa1.32□□□□□ -2.2
CCDC7-216ENST00000640058 WDR7Q9Y4E6 1490 aa1.32□□□□□ -2.2
CCDC7-216ENST00000640058 MIF4GDA9UHW6 222 aaKnown RBP1.32□□□□□ -2.2
CCDC7-216ENST00000640058 M0QZK8 103 aa1.32□□□□□ -2.2
CCDC7-216ENST00000640058 BHLHE40O14503 412 aa1.32□□□□□ -2.2
CCDC7-216ENST00000640058 TGOLN2O43493 480 aa1.32□□□□□ -2.2
CCDC7-216ENST00000640058 GSTZ1O43708 216 aaPredicted RBP1.32□□□□□ -2.2
CCDC7-216ENST00000640058 CST8O60676 142 aa1.32□□□□□ -2.2
CCDC7-216ENST00000640058 NDUFB2O95178 105 aa1.32□□□□□ -2.2
CCDC7-216ENST00000640058 ARL14EPLP0DKL9 152 aa1.32□□□□□ -2.2
CCDC7-216ENST00000640058 CXCL3P19876 107 aa1.32□□□□□ -2.2
CCDC7-216ENST00000640058 IFNGR2P38484 337 aa1.32□□□□□ -2.2
CCDC7-216ENST00000640058 CD200P41217 278 aa1.32□□□□□ -2.2
CCDC7-216ENST00000640058 SRP9P49458 86 aaKnown RBP1.32□□□□□ -2.2
CCDC7-216ENST00000640058 RPS24P62847 133 aaKnown RBP1.32□□□□□ -2.2
CCDC7-216ENST00000640058 TFAMQ00059 246 aaKnown RBP1.32□□□□□ -2.2
CCDC7-216ENST00000640058 KRR1Q13601 381 aaKnown RBP1.32□□□□□ -2.2
CCDC7-216ENST00000640058 TAF1AQ15573 450 aaPredicted RBP1.32□□□□□ -2.2
CCDC7-216ENST00000640058 TSNQ15631 228 aaKnown RBP1.32□□□□□ -2.2
CCDC7-216ENST00000640058 ARHGAP11BQ3KRB8 267 aa1.32□□□□□ -2.2
CCDC7-216ENST00000640058 CLVS1Q8IUQ0 354 aaPredicted RBP1.32□□□□□ -2.2
CCDC7-216ENST00000640058 C1orf174Q8IYL3 243 aa1.32□□□□□ -2.2
CCDC7-216ENST00000640058 OR51D1Q8NGF3 324 aa1.32□□□□□ -2.2
CCDC7-216ENST00000640058 C12orf43Q96C57 262 aaKnown RBP1.32□□□□□ -2.2
CCDC7-216ENST00000640058 MS4A6EQ96DS6 147 aa1.32□□□□□ -2.2
CCDC7-216ENST00000640058 NIPSNAP1Q9BPW8 284 aa1.32□□□□□ -2.2
CCDC7-216ENST00000640058 TIPINQ9BVW5 301 aa1.32□□□□□ -2.2
CCDC7-216ENST00000640058 KIFC1Q9BW19 673 aa1.32□□□□□ -2.2
CCDC7-216ENST00000640058 DDA1Q9BW61 102 aa1.32□□□□□ -2.2
CCDC7-216ENST00000640058 PCBD2Q9H0N5 130 aa1.32□□□□□ -2.2
CCDC7-216ENST00000640058 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.32□□□□□ -2.2
CCDC7-216ENST00000640058 PRO2289Q9P1D8 64 aa1.32□□□□□ -2.2
CCDC7-216ENST00000640058 SNX12Q9UMY4 172 aa1.32□□□□□ -2.2
CCDC7-216ENST00000640058 GINS2Q9Y248 185 aa1.32□□□□□ -2.2
CCDC7-216ENST00000640058 LSM5Q9Y4Y9 91 aaKnown RBP1.32□□□□□ -2.2
CCDC7-216ENST00000640058 PTPRBP23467 1997 aa1.32□□□□□ -2.2
CCDC7-216ENST00000640058 NUP155O75694 1391 aa1.32□□□□□ -2.2
CCDC7-216ENST00000640058 EIF3AQ14152 1382 aaKnown RBP1.32□□□□□ -2.2
CCDC7-216ENST00000640058 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.31□□□□□ -2.2
CCDC7-216ENST00000640058 TMEM235A6NFC5 223 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 DISC1C4P0D8 188 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 F5H768 121 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 M0R381 172 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 UBFD1O14562 309 aaKnown RBP1.31□□□□□ -2.2
CCDC7-216ENST00000640058 GNRH2O43555 120 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 CHP2O43745 196 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 FADS1O60427 444 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 OR2B3O76000 313 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 CRYZL1O95825 349 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 MT-CO2P00403 227 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 IGHV1-69P01742 117 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 APOC1P02654 83 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 TCRBP04435 133 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 IFNA16P05015 189 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 FAM228BP0C875 321 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 COX4I1P13073 169 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 UGT2B7P16662 529 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 S100GP29377 79 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 SULT1A1P50225 295 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 ERVS71-1P61550 626 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms