RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 TMEM178BH3BS89 294 aa4.88□□□□□ -1.63
ATM-229ENST00000639953 CD5LO43866 347 aa4.88□□□□□ -1.63
ATM-229ENST00000639953 IGHV2-70P01814 119 aa4.88□□□□□ -1.63
ATM-229ENST00000639953 CCL20P78556 96 aa4.88□□□□□ -1.63
ATM-229ENST00000639953 FGL1Q08830 312 aa4.88□□□□□ -1.63
ATM-229ENST00000639953 MIDNQ504T8 468 aa4.88□□□□□ -1.63
ATM-229ENST00000639953 OR2B11Q5JQS5 317 aa4.88□□□□□ -1.63
ATM-229ENST00000639953 NCR3LG1Q68D85 454 aa4.88□□□□□ -1.63
ATM-229ENST00000639953 LYPD2Q6UXB3 125 aa4.88□□□□□ -1.63
ATM-229ENST00000639953 LINC00596Q86U02 117 aa4.88□□□□□ -1.63
ATM-229ENST00000639953 BAP18Q8IXM2 172 aa4.88□□□□□ -1.63
ATM-229ENST00000639953 LGI3Q8N145 548 aa4.88□□□□□ -1.63
ATM-229ENST00000639953 DEFB108BQ8NET1 73 aa4.88□□□□□ -1.63
ATM-229ENST00000639953 SVIPQ8NHG7 77 aa4.88□□□□□ -1.63
ATM-229ENST00000639953 RAB1CQ92928 201 aa4.88□□□□□ -1.63
ATM-229ENST00000639953 GAFA1Q96PS6 74 aa4.88□□□□□ -1.63
ATM-229ENST00000639953 CCL13Q99616 98 aa4.88□□□□□ -1.63
ATM-229ENST00000639953 TOLLIPQ9H0E2 274 aa4.88□□□□□ -1.63
ATM-229ENST00000639953 ZNF665Q9H7R5 613 aa4.88□□□□□ -1.63
ATM-229ENST00000639953 YAE1D1Q9NRH1 226 aa4.88□□□□□ -1.63
ATM-229ENST00000639953 PCDHB16Q9NRJ7 776 aa4.88□□□□□ -1.63
ATM-229ENST00000639953 DNAJB11Q9UBS4 358 aa4.88□□□□□ -1.63
ATM-229ENST00000639953 TRAPPC2LQ9UL33 140 aa4.88□□□□□ -1.63
ATM-229ENST00000639953 POMT1Q9Y6A1 747 aa4.88□□□□□ -1.63
ATM-229ENST00000639953 ABCA2Q9BZC7 2435 aa4.88□□□□□ -1.63
ATM-229ENST00000639953 SVEP1Q4LDE5 3571 aa4.88□□□□□ -1.63
ATM-229ENST00000639953 MXRA5Q9NR99 2828 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 ARHGAP32A7KAX9 2087 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 A0A087WWL8 130 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 TRAV3A0A0B4J244 114 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 H0Y980 276 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 TXNL1O43396 289 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 CHST1O43916 411 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 GPR137BO60478 399 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 TGFAP01135 160 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 IGHV2-5P01817 119 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 GYPAP02724 150 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 TK1P04183 234 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 PF4V1P10720 104 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 MYOD1P15172 320 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 OMGP23515 440 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 F2RP25116 425 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 GABRA2P47869 451 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 DLX1P56177 255 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 KRTAP10-7P60409 375 aaPredicted RBP4.87□□□□□ -1.63
ATM-229ENST00000639953 LCN2P80188 198 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 CYCSP99999 105 aaKnown RBP4.87□□□□□ -1.63
ATM-229ENST00000639953 EWSR1Q01844 656 aaKnown RBP eCLIP4.87□□□□□ -1.63
ATM-229ENST00000639953 PRB3Q04118 309 aaPredicted RBP4.87□□□□□ -1.63
ATM-229ENST00000639953 EDDM3AQ14507 147 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 KRBOX4Q5JUW0 171 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 C10orf25Q5T742 122 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 CYB5R2Q6BCY4 276 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 HSD17B13Q7Z5P4 300 aaPredicted RBP4.87□□□□□ -1.63
ATM-229ENST00000639953 PDZD9Q8IXQ8 264 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 TMEM252Q8N6L7 170 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 FAM216BQ8N7L0 139 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 ZNF565Q8N9K5 539 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 SPERTQ8NA61 448 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 OR5D13Q8NGL4 314 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 OR10J5Q8NHC4 309 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 TIMD4Q96H15 378 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 AGMATQ9BSE5 352 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 SLC25A32Q9H2D1 315 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 KCNIP3Q9Y2W7 256 aa4.87□□□□□ -1.63
ATM-229ENST00000639953 KIR2DS1A0A191URI9 304 aa4.86□□□□□ -1.63
ATM-229ENST00000639953 TMEM30CPA0ZSE6 113 aa4.86□□□□□ -1.63
ATM-229ENST00000639953 FAM74A7A6NL05 159 aa4.86□□□□□ -1.63
ATM-229ENST00000639953 PMS2P5A8MQ11 134 aa4.86□□□□□ -1.63
ATM-229ENST00000639953 DNASE2O00115 360 aaPredicted RBP4.86□□□□□ -1.63
ATM-229ENST00000639953 SSSCA1O60232 199 aa4.86□□□□□ -1.63
ATM-229ENST00000639953 CST7O76096 145 aa4.86□□□□□ -1.63
ATM-229ENST00000639953 S1PR2O95136 353 aa4.86□□□□□ -1.63
ATM-229ENST00000639953 IFNA21P01568 189 aa4.86□□□□□ -1.63
ATM-229ENST00000639953 WNT2P09544 360 aa4.86□□□□□ -1.63
ATM-229ENST00000639953 CTXN2P0C2S0 81 aa4.86□□□□□ -1.63
ATM-229ENST00000639953 OR9G9P0C7N8 305 aa4.86□□□□□ -1.63
ATM-229ENST00000639953 IAPPP10997 89 aa4.86□□□□□ -1.63
ATM-229ENST00000639953 IRF2P14316 349 aa4.86□□□□□ -1.63
ATM-229ENST00000639953 MUC1P15941 1255 aaPredicted RBP4.86□□□□□ -1.63
ATM-229ENST00000639953 CFHR2P36980 270 aa4.86□□□□□ -1.63
ATM-229ENST00000639953 KIR2DS4P43632 304 aa4.86□□□□□ -1.63
ATM-229ENST00000639953 DYNLT3P51808 116 aa4.86□□□□□ -1.63
ATM-229ENST00000639953 TMEM267Q0VDI3 215 aaPredicted RBP4.86□□□□□ -1.63
ATM-229ENST00000639953 ZNF816Q0VGE8 651 aaPredicted RBP4.86□□□□□ -1.63
ATM-229ENST00000639953 KIR2DS1Q14954 304 aa4.86□□□□□ -1.63
ATM-229ENST00000639953 GUCA2BQ16661 112 aa4.86□□□□□ -1.63
ATM-229ENST00000639953 FAM74A3Q4VXF1 159 aa4.86□□□□□ -1.63
ATM-229ENST00000639953 RPL39P5Q59GN2 51 aa4.86□□□□□ -1.63
ATM-229ENST00000639953 SPINK9Q5DT21 86 aa4.86□□□□□ -1.63
ATM-229ENST00000639953 CT45A1Q5HYN5 189 aa4.86□□□□□ -1.63
ATM-229ENST00000639953 STUMQ69YW2 141 aa4.86□□□□□ -1.63
ATM-229ENST00000639953 SPSB3Q6PJ21 355 aa4.86□□□□□ -1.63
ATM-229ENST00000639953 SSX7Q7RTT5 188 aa4.86□□□□□ -1.63
ATM-229ENST00000639953 ZNF695Q8IW36 515 aa4.86□□□□□ -1.63
ATM-229ENST00000639953 EIF4E3Q8N5X7 224 aaKnown RBP4.86□□□□□ -1.63
ATM-229ENST00000639953 CCDC71LQ8N9Z2 235 aa4.86□□□□□ -1.63
ATM-229ENST00000639953 INO80EQ8NBZ0 244 aaPredicted RBP4.86□□□□□ -1.63
ATM-229ENST00000639953 OR10Z1Q8NGY1 313 aa4.86□□□□□ -1.63
ATM-229ENST00000639953 CT45A3Q8NHU0 189 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms