RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 PMS2P5A8MQ11 134 aa11.34□□□□□ -0.59
ATRIP-208ENST00000639561 SNAPINO95295 136 aa11.34□□□□□ -0.59
ATRIP-208ENST00000639561 H2AFB1P0C5Y9 115 aa11.34□□□□□ -0.59
ATRIP-208ENST00000639561 NDUFB7P17568 137 aa11.34□□□□□ -0.59
ATRIP-208ENST00000639561 PEA15Q15121 130 aa11.34□□□□□ -0.59
ATRIP-208ENST00000639561 RARRES2Q99969 163 aa11.34□□□□□ -0.59
ATRIP-208ENST00000639561 WDR61Q9GZS3 305 aaKnown RBP11.34□□□□□ -0.59
ATRIP-208ENST00000639561 EGLN1Q9GZT9 426 aa11.34□□□□□ -0.59
ATRIP-208ENST00000639561 VSIRQ9H7M9 311 aa11.34□□□□□ -0.59
ATRIP-208ENST00000639561 RAB9BQ9NP90 201 aa11.34□□□□□ -0.59
ATRIP-208ENST00000639561 IDI2-AS1Q9NZ38 188 aa11.34□□□□□ -0.59
ATRIP-208ENST00000639561 ZNRD1Q9P1U0 126 aa11.34□□□□□ -0.59
ATRIP-208ENST00000639561 SLC25A10Q9UBX3 287 aaPredicted RBP11.34□□□□□ -0.59
ATRIP-208ENST00000639561 GAB2Q9UQC2 676 aa11.34□□□□□ -0.59
ATRIP-208ENST00000639561 NKX6-3A6NJ46 265 aa11.34□□□□□ -0.59
ATRIP-208ENST00000639561 GNG10P50151 68 aa11.34□□□□□ -0.59
ATRIP-208ENST00000639561 RPS16P62249 146 aaKnown RBP11.34□□□□□ -0.59
ATRIP-208ENST00000639561 AARDQ4LEZ3 155 aa11.34□□□□□ -0.59
ATRIP-208ENST00000639561 SCGB1C1Q8TD33 95 aa11.34□□□□□ -0.59
ATRIP-208ENST00000639561 Q96MF0 132 aa11.34□□□□□ -0.59
ATRIP-208ENST00000639561 S1PR3Q99500 378 aa11.34□□□□□ -0.59
ATRIP-208ENST00000639561 TMEM106BQ9NUM4 274 aa11.34□□□□□ -0.59
ATRIP-208ENST00000639561 FLNAP21333 2647 aaKnown RBP11.34□□□□□ -0.59
ATRIP-208ENST00000639561 ZNF672Q499Z4 452 aaPredicted RBP11.33□□□□□ -0.6
ATRIP-208ENST00000639561 LYG1Q8N1E2 194 aa11.33□□□□□ -0.6
ATRIP-208ENST00000639561 HIPK2Q9H2X6 1198 aa11.33□□□□□ -0.6
ATRIP-208ENST00000639561 RPRMQ9NS64 109 aa11.33□□□□□ -0.6
ATRIP-208ENST00000639561 RPUSD1Q9UJJ7 312 aaKnown RBP11.33□□□□□ -0.6
ATRIP-208ENST00000639561 PRELID3BQ9Y3B1 194 aa11.33□□□□□ -0.6
ATRIP-208ENST00000639561 LINC00312Q9Y6C7 94 aa11.33□□□□□ -0.6
ATRIP-208ENST00000639561 PPIAL4EA0A075B759 164 aa11.33□□□□□ -0.6
ATRIP-208ENST00000639561 TRAV3A0A0B4J244 114 aa11.33□□□□□ -0.6
ATRIP-208ENST00000639561 A0A1B0GW64 132 aa11.33□□□□□ -0.6
ATRIP-208ENST00000639561 CEBPZOSA8MTT3 80 aa11.33□□□□□ -0.6
ATRIP-208ENST00000639561 PPIAL4DF5H284 164 aa11.33□□□□□ -0.6
ATRIP-208ENST00000639561 PPIAL4FP0DN26 164 aa11.33□□□□□ -0.6
ATRIP-208ENST00000639561 ZNF383Q8NA42 475 aa11.33□□□□□ -0.6
ATRIP-208ENST00000639561 SFT2D1Q8WV19 159 aa11.33□□□□□ -0.6
ATRIP-208ENST00000639561 PSMG3Q9BT73 122 aaPredicted RBP11.33□□□□□ -0.6
ATRIP-208ENST00000639561 PBDC1Q9BVG4 233 aa11.33□□□□□ -0.6
ATRIP-208ENST00000639561 DYNLRB1Q9NP97 96 aa11.33□□□□□ -0.6
ATRIP-208ENST00000639561 PPIAL4AQ9Y536 164 aa11.33□□□□□ -0.6
ATRIP-208ENST00000639561 KPTNQ9Y664 436 aa11.33□□□□□ -0.6
ATRIP-208ENST00000639561 hADV38S2A0JD32 116 aa11.32□□□□□ -0.6
ATRIP-208ENST00000639561 OR8U8P0C7N1 319 aa11.32□□□□□ -0.6
ATRIP-208ENST00000639561 MRPS11P82912 194 aaKnown RBP11.32□□□□□ -0.6
ATRIP-208ENST00000639561 KRTAP21-3Q3LHN1 58 aa11.32□□□□□ -0.6
ATRIP-208ENST00000639561 LYPD2Q6UXB3 125 aa11.32□□□□□ -0.6
ATRIP-208ENST00000639561 DPPA3Q6W0C5 159 aa11.32□□□□□ -0.6
ATRIP-208ENST00000639561 C1orf87Q8N0U7 546 aa11.32□□□□□ -0.6
ATRIP-208ENST00000639561 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.32□□□□□ -0.6
ATRIP-208ENST00000639561 CLRN3Q8NCR9 226 aa11.32□□□□□ -0.6
ATRIP-208ENST00000639561 TAF15Q92804 592 aaKnown RBP eCLIP11.32□□□□□ -0.6
ATRIP-208ENST00000639561 CIB3Q96Q77 187 aaPredicted RBP11.32□□□□□ -0.6
ATRIP-208ENST00000639561 PARD6GQ9BYG4 376 aaPredicted RBP11.32□□□□□ -0.6
ATRIP-208ENST00000639561 GSX1Q9H4S2 264 aaPredicted RBP11.32□□□□□ -0.6
ATRIP-208ENST00000639561 KIAA1456Q9P272 454 aa11.32□□□□□ -0.6
ATRIP-208ENST00000639561 MTORP42345 2549 aa11.32□□□□□ -0.6
ATRIP-208ENST00000639561 FAM90A9PA6NNJ1 464 aa11.32□□□□□ -0.6
ATRIP-208ENST00000639561 VSTM5A8MXK1 200 aa11.32□□□□□ -0.6
ATRIP-208ENST00000639561 TNFRSF13BO14836 293 aaPredicted RBP11.32□□□□□ -0.6
ATRIP-208ENST00000639561 NQO2P16083 231 aa11.32□□□□□ -0.6
ATRIP-208ENST00000639561 CCL3L1P16619 93 aa11.32□□□□□ -0.6
ATRIP-208ENST00000639561 ATP5J2P56134 94 aa11.32□□□□□ -0.6
ATRIP-208ENST00000639561 RPL31P62899 125 aaKnown RBP11.32□□□□□ -0.6
ATRIP-208ENST00000639561 RELBQ01201 579 aa11.32□□□□□ -0.6
ATRIP-208ENST00000639561 HNF4GQ14541 408 aa11.32□□□□□ -0.6
ATRIP-208ENST00000639561 ZNF726P1Q15940 193 aa11.32□□□□□ -0.6
ATRIP-208ENST00000639561 DHRS7BQ6IAN0 325 aaPredicted RBP11.32□□□□□ -0.6
ATRIP-208ENST00000639561 ETV3LQ6ZN32 361 aa11.32□□□□□ -0.6
ATRIP-208ENST00000639561 SSX7Q7RTT5 188 aa11.32□□□□□ -0.6
ATRIP-208ENST00000639561 OR4S2Q8NH73 311 aa11.32□□□□□ -0.6
ATRIP-208ENST00000639561 TMEM140Q9NV12 185 aa11.32□□□□□ -0.6
ATRIP-208ENST00000639561 TNCP24821 2201 aa11.31□□□□□ -0.6
ATRIP-208ENST00000639561 ACANP16112 2415 aa11.31□□□□□ -0.6
ATRIP-208ENST00000639561 BTBD17A6NE02 478 aa11.31□□□□□ -0.6
ATRIP-208ENST00000639561 C15orf62A8K5M9 175 aa11.31□□□□□ -0.6
ATRIP-208ENST00000639561 IFNA17P01571 189 aa11.31□□□□□ -0.6
ATRIP-208ENST00000639561 KIR2DS2P43631 304 aa11.31□□□□□ -0.6
ATRIP-208ENST00000639561 SLC25A48Q6ZT89 311 aaKnown RBP11.31□□□□□ -0.6
ATRIP-208ENST00000639561 SLC35B3Q9H1N7 401 aa11.31□□□□□ -0.6
ATRIP-208ENST00000639561 SAV1Q9H4B6 383 aaPredicted RBP11.31□□□□□ -0.6
ATRIP-208ENST00000639561 CTSZQ9UBR2 303 aa11.31□□□□□ -0.6
ATRIP-208ENST00000639561 RBFOX3A6NFN3 312 aa11.31□□□□□ -0.6
ATRIP-208ENST00000639561 APOBEC3AP31941 199 aaPredicted RBP11.31□□□□□ -0.6
ATRIP-208ENST00000639561 ERVK-16P61578 105 aa11.31□□□□□ -0.6
ATRIP-208ENST00000639561 EFNB3Q15768 340 aa11.31□□□□□ -0.6
ATRIP-208ENST00000639561 HAGHQ16775 308 aa11.31□□□□□ -0.6
ATRIP-208ENST00000639561 TMEM200BQ69YZ2 307 aa11.31□□□□□ -0.6
ATRIP-208ENST00000639561 THBS3P49746 956 aa11.3□□□□□ -0.6
ATRIP-208ENST00000639561 ELLP55199 621 aaPredicted RBP11.3□□□□□ -0.6
ATRIP-208ENST00000639561 SERF2P84101 59 aa11.3□□□□□ -0.6
ATRIP-208ENST00000639561 OR10P1Q8NGE3 313 aa11.3□□□□□ -0.6
ATRIP-208ENST00000639561 OR4A16Q8NH70 328 aa11.3□□□□□ -0.6
ATRIP-208ENST00000639561 RCC1LQ96I51 464 aaKnown RBP11.3□□□□□ -0.6
ATRIP-208ENST00000639561 TMEM147Q9BVK8 224 aa11.3□□□□□ -0.6
ATRIP-208ENST00000639561 MS4A5Q9H3V2 200 aa11.3□□□□□ -0.6
ATRIP-208ENST00000639561 CISD1Q9NZ45 108 aaKnown RBP11.3□□□□□ -0.6
ATRIP-208ENST00000639561 OVOL3O00110 214 aa11.3□□□□□ -0.6
ATRIP-208ENST00000639561 ARG1P05089 322 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms