RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 COL7A1Q02388 2944 aa6.17□□□□□ -1.42
PNKP-229ENST00000637897 TRBV6-7A0A0A0MS04 114 aa6.16□□□□□ -1.42
PNKP-229ENST00000637897 WI2-2373I1.2A0A1W2PRP0 233 aa6.16□□□□□ -1.42
PNKP-229ENST00000637897 TMEM30CPA0ZSE6 113 aa6.16□□□□□ -1.42
PNKP-229ENST00000637897 GPR31O00270 319 aa6.16□□□□□ -1.42
PNKP-229ENST00000637897 TOR1AO14656 332 aa6.16□□□□□ -1.42
PNKP-229ENST00000637897 HSD17B6O14756 317 aa6.16□□□□□ -1.42
PNKP-229ENST00000637897 BET1O15155 118 aa6.16□□□□□ -1.42
PNKP-229ENST00000637897 B3GALNT1O75752 331 aa6.16□□□□□ -1.42
PNKP-229ENST00000637897 MPC2O95563 127 aa6.16□□□□□ -1.42
PNKP-229ENST00000637897 IGHG2P01859 326 aa6.16□□□□□ -1.42
PNKP-229ENST00000637897 SCTP09683 121 aa6.16□□□□□ -1.42
PNKP-229ENST00000637897 S100A1P23297 94 aa6.16□□□□□ -1.42
PNKP-229ENST00000637897 BRS3P32247 399 aa6.16□□□□□ -1.42
PNKP-229ENST00000637897 ZNF137PP52743 207 aa6.16□□□□□ -1.42
PNKP-229ENST00000637897 F2RL1P55085 397 aa6.16□□□□□ -1.42
PNKP-229ENST00000637897 CFHR3Q02985 330 aa6.16□□□□□ -1.42
PNKP-229ENST00000637897 KIAA0141Q14154 515 aaPredicted RBP6.16□□□□□ -1.42
PNKP-229ENST00000637897 SLC25A48Q6ZT89 311 aaKnown RBP6.16□□□□□ -1.42
PNKP-229ENST00000637897 ACOT7LQ6ZUV0 252 aa6.16□□□□□ -1.42
PNKP-229ENST00000637897 CMTM1Q8IZ96 169 aa6.16□□□□□ -1.42
PNKP-229ENST00000637897 H1FOOQ8IZA3 346 aaPredicted RBP6.16□□□□□ -1.42
PNKP-229ENST00000637897 LGI3Q8N145 548 aa6.16□□□□□ -1.42
PNKP-229ENST00000637897 LINC00482Q8N8I6 264 aa6.16□□□□□ -1.42
PNKP-229ENST00000637897 INO80EQ8NBZ0 244 aaPredicted RBP6.16□□□□□ -1.42
PNKP-229ENST00000637897 ZNF680Q8NEM1 530 aa6.16□□□□□ -1.42
PNKP-229ENST00000637897 OR52M1Q8NGK5 317 aa6.16□□□□□ -1.42
PNKP-229ENST00000637897 ARL11Q969Q4 196 aa6.16□□□□□ -1.42
PNKP-229ENST00000637897 RPEQ96AT9 228 aa6.16□□□□□ -1.42
PNKP-229ENST00000637897 HSPB9Q9BQS6 159 aa6.16□□□□□ -1.42
PNKP-229ENST00000637897 ARL6Q9H0F7 186 aa6.16□□□□□ -1.42
PNKP-229ENST00000637897 PARP12Q9H0J9 701 aaKnown RBP6.16□□□□□ -1.42
PNKP-229ENST00000637897 MBNL3Q9NUK0 354 aaKnown RBP6.16□□□□□ -1.42
PNKP-229ENST00000637897 KCNIP1Q9NZI2 227 aa6.16□□□□□ -1.42
PNKP-229ENST00000637897 UBQLN2Q9UHD9 624 aa6.16□□□□□ -1.42
PNKP-229ENST00000637897 TRAPPC2LQ9UL33 140 aa6.16□□□□□ -1.42
PNKP-229ENST00000637897 TNFSF18Q9UNG2 199 aa6.16□□□□□ -1.42
PNKP-229ENST00000637897 MOB4Q9Y3A3 225 aa6.16□□□□□ -1.42
PNKP-229ENST00000637897 TCRBV4S1A1TA0A5B7 111 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 MPPED1O15442 326 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 FGF16O43320 207 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 ADAP1O75689 374 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 HBZP02008 142 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 OR5AC1P0C628 307 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 LYL1P12980 280 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 GZMHP20718 246 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 CNTFRP26992 372 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 GNRHRP30968 328 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 NUP62P37198 522 aaPredicted RBP6.15□□□□□ -1.42
PNKP-229ENST00000637897 HTR2BP41595 481 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 RAB7AP51149 207 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 RAB14P61106 215 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 TMEM187Q14656 261 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 HMGN3Q15651 99 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 PHLDA2Q53GA4 152 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 TRAT1Q6PIZ9 186 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 CENPVQ7Z7K6 275 aaPredicted RBP6.15□□□□□ -1.42
PNKP-229ENST00000637897 SLC51BQ86UW2 128 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 MRPL41Q8IXM3 137 aaKnown RBP6.15□□□□□ -1.42
PNKP-229ENST00000637897 OR8H3Q8N146 312 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 KCNRGQ8N5I3 272 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 FAM71E2Q8N5Q1 922 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 C8orf31Q8N9H6 132 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 OR4F17Q8NGA8 305 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 OR52L2PQ8NGH6 319 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 OR10V1Q8NGI7 309 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 SECTM1Q8WVN6 248 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 DUX3Q96PT4 197 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 OR4F4Q96R69 305 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 P2RX4Q99571 388 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 ZNF251Q9BRH9 671 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 SLC5A7Q9GZV3 580 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 ZFP57Q9NU63 452 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 RDH8Q9NYR8 311 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 OR2W1Q9Y3N9 320 aa6.15□□□□□ -1.42
PNKP-229ENST00000637897 TSSC4Q9Y5U2 329 aaPredicted RBP6.15□□□□□ -1.42
PNKP-229ENST00000637897 IGKV1-6A0A0C4DH72 117 aa6.14□□□□□ -1.43
PNKP-229ENST00000637897 C3orf85A0A1B0GTC6 90 aa6.14□□□□□ -1.43
PNKP-229ENST00000637897 DUXBA0A1W2PPF3 345 aa6.14□□□□□ -1.43
PNKP-229ENST00000637897 KANTRA0A1W2PQU2 76 aa6.14□□□□□ -1.43
PNKP-229ENST00000637897 PROP1O75360 226 aa6.14□□□□□ -1.43
PNKP-229ENST00000637897 RLN2P04090 185 aa6.14□□□□□ -1.43
PNKP-229ENST00000637897 HOXB5P09067 269 aa6.14□□□□□ -1.43
PNKP-229ENST00000637897 FAM106CPP0CH98 169 aa6.14□□□□□ -1.43
PNKP-229ENST00000637897 TMEM11P17152 192 aa6.14□□□□□ -1.43
PNKP-229ENST00000637897 HOXD3P31249 432 aaPredicted RBP6.14□□□□□ -1.43
PNKP-229ENST00000637897 CEACAM3P40198 252 aa6.14□□□□□ -1.43
PNKP-229ENST00000637897 GPR12P47775 334 aa6.14□□□□□ -1.43
PNKP-229ENST00000637897 THBS3P49746 956 aa6.14□□□□□ -1.43
PNKP-229ENST00000637897 LUMP51884 338 aaPredicted RBP6.14□□□□□ -1.43
PNKP-229ENST00000637897 RPL23AP62750 156 aaKnown RBP6.14□□□□□ -1.43
PNKP-229ENST00000637897 EGFEM1PQ0D2K5 195 aa6.14□□□□□ -1.43
PNKP-229ENST00000637897 IL15RAQ13261 267 aa6.14□□□□□ -1.43
PNKP-229ENST00000637897 EXOSC2Q13868 293 aaKnown RBP6.14□□□□□ -1.43
PNKP-229ENST00000637897 SMCO1Q147U7 214 aa6.14□□□□□ -1.43
PNKP-229ENST00000637897 IAH1Q2TAA2 248 aaPredicted RBP6.14□□□□□ -1.43
PNKP-229ENST00000637897 LRRC37A5PQ49AS3 106 aa6.14□□□□□ -1.43
PNKP-229ENST00000637897 MORN2Q502X0 79 aa6.14□□□□□ -1.43
PNKP-229ENST00000637897 C9orf152Q5JTZ5 239 aa6.14□□□□□ -1.43
PNKP-229ENST00000637897 C6orf183Q5T699 404 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms