RNA–Protein interactions for RNA: ENST00000637540.1

SCN8A-213, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 93 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-213ENST00000637540 RNASEK-C17orf49H0YIS7 233 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 DNASE2O00115 360 aaPredicted RBP3.89□□□□□ -1.79
SCN8A-213ENST00000637540 RRHO14718 337 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 NDUFS7O75251 213 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 DFFBO76075 338 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 LY6HO94772 140 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 LY86O95711 162 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 CRYZL1O95825 349 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 IGKV1D-33P01593 117 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 IGKV1-33P01594 117 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 RNF224P0DH78 156 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 MYOD1P15172 320 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 M6PRP20645 277 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 GNG10P50151 68 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 OR2B8PP59922 312 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 HSPE1P61604 102 aaKnown RBP3.89□□□□□ -1.79
SCN8A-213ENST00000637540 TAGLNQ01995 201 aaKnown RBP3.89□□□□□ -1.79
SCN8A-213ENST00000637540 SLC38A11Q08AI6 406 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 GUCA2BQ16661 112 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 ATP6V1FQ16864 119 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 SPANXN5Q5MJ07 72 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 ACSM6Q6P461 480 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 SSX9Q7RTT3 188 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 SSX7Q7RTT5 188 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 STX12Q86Y82 276 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 TMEM217Q8N7C4 229 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 BEND2Q8NDZ0 799 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 OR13D1Q8NGV5 346 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 OR4S2Q8NH73 311 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 OR9G1Q8NH87 305 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 RNASE11Q8TAA1 199 aaKnown RBP3.89□□□□□ -1.79
SCN8A-213ENST00000637540 TAF15Q92804 592 aaKnown RBP eCLIP3.89□□□□□ -1.79
SCN8A-213ENST00000637540 TNFRSF14Q92956 283 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 GNPNAT1Q96EK6 184 aaPredicted RBP3.89□□□□□ -1.79
SCN8A-213ENST00000637540 NEIL1Q96FI4 390 aaPredicted RBP3.89□□□□□ -1.79
SCN8A-213ENST00000637540 RITA1Q96K30 269 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 BBC3Q96PG8 261 aaPredicted RBP3.89□□□□□ -1.79
SCN8A-213ENST00000637540 CIB3Q96Q77 187 aaPredicted RBP3.89□□□□□ -1.79
SCN8A-213ENST00000637540 S1PR3Q99500 378 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 PCGF1Q9BSM1 259 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 RSG1Q9BU20 258 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 SEC11CQ9BY50 192 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 TMEM133Q9H2Q1 129 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 HRH4Q9H3N8 390 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 VSIRQ9H7M9 311 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 PATZ1Q9HBE1 687 aaKnown RBP3.89□□□□□ -1.79
SCN8A-213ENST00000637540 RPRMQ9NS64 109 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 SLC35D1Q9NTN3 355 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 UQCC1Q9NVA1 299 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 MIOXQ9UGB7 285 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 NUP50Q9UKX7 468 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 ZNF257Q9Y2Q1 563 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 FAM96BQ9Y3D0 163 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 LSM4Q9Y4Z0 139 aaKnown RBP3.89□□□□□ -1.79
SCN8A-213ENST00000637540 TIMM9Q9Y5J7 89 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 SESN1Q9Y6P5 492 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 ANKRD17O75179 2603 aaKnown RBP3.89□□□□□ -1.79
SCN8A-213ENST00000637540 FAM208BQ5VWN6 2430 aa3.89□□□□□ -1.79
SCN8A-213ENST00000637540 PTPN13Q12923 2485 aa3.88□□□□□ -1.79
SCN8A-213ENST00000637540 VPS13CQ709C8 3753 aa3.88□□□□□ -1.79
SCN8A-213ENST00000637540 TEX50A0A1B0GTY4 177 aa3.88□□□□□ -1.79
SCN8A-213ENST00000637540 ODF3BA8MYP8 253 aa3.88□□□□□ -1.79
SCN8A-213ENST00000637540 FNDC10F2Z333 226 aa3.88□□□□□ -1.79
SCN8A-213ENST00000637540 NDUFS6O75380 124 aaKnown RBP3.88□□□□□ -1.79
SCN8A-213ENST00000637540 KBTBD11O94819 623 aa3.88□□□□□ -1.79
SCN8A-213ENST00000637540 F12P00748 615 aaPredicted RBP3.88□□□□□ -1.79
SCN8A-213ENST00000637540 HRASP01112 189 aa3.88□□□□□ -1.79
SCN8A-213ENST00000637540 H2AFB1P0C5Y9 115 aa3.88□□□□□ -1.79
SCN8A-213ENST00000637540 SAA1P0DJI8 122 aaPredicted RBP3.88□□□□□ -1.79
SCN8A-213ENST00000637540 RNASE2P10153 161 aaKnown RBP3.88□□□□□ -1.79
SCN8A-213ENST00000637540 CAMLGP49069 296 aa3.88□□□□□ -1.79
SCN8A-213ENST00000637540 DVL1P1P54792 670 aaPredicted RBP3.88□□□□□ -1.79
SCN8A-213ENST00000637540 DLX1P56177 255 aa3.88□□□□□ -1.79
SCN8A-213ENST00000637540 SSBP2P81877 361 aaPredicted RBP3.88□□□□□ -1.79
SCN8A-213ENST00000637540 SERF2P84101 59 aa3.88□□□□□ -1.79
SCN8A-213ENST00000637540 AKR1C1Q04828 323 aa3.88□□□□□ -1.79
SCN8A-213ENST00000637540 SRSF1Q07955 248 aaKnown RBP eCLIP3.88□□□□□ -1.79
SCN8A-213ENST00000637540 HABP2Q14520 560 aaPredicted RBP3.88□□□□□ -1.79
SCN8A-213ENST00000637540 TMEM249Q2WGJ8 235 aa3.88□□□□□ -1.79
SCN8A-213ENST00000637540 HLA-DRB5Q30154 266 aa3.88□□□□□ -1.79
SCN8A-213ENST00000637540 SPINK9Q5DT21 86 aa3.88□□□□□ -1.79
SCN8A-213ENST00000637540 AVPI1Q5T686 147 aa3.88□□□□□ -1.79
SCN8A-213ENST00000637540 DPPA3Q6W0C5 159 aa3.88□□□□□ -1.79
SCN8A-213ENST00000637540 TMEM182Q6ZP80 229 aaPredicted RBP3.88□□□□□ -1.79
SCN8A-213ENST00000637540 C1orf122Q6ZSJ8 110 aa3.88□□□□□ -1.79
SCN8A-213ENST00000637540 ABHD12Q8N2K0 398 aa3.88□□□□□ -1.79
SCN8A-213ENST00000637540 RPP25LQ8N5L8 163 aaKnown RBP3.88□□□□□ -1.79
SCN8A-213ENST00000637540 OR11H6Q8NGC7 330 aa3.88□□□□□ -1.79
SCN8A-213ENST00000637540 OR4P4Q8NGL7 312 aa3.88□□□□□ -1.79
SCN8A-213ENST00000637540 OSR1Q8TAX0 266 aaPredicted RBP3.88□□□□□ -1.79
SCN8A-213ENST00000637540 TMEM167AQ8TBQ9 72 aa3.88□□□□□ -1.79
SCN8A-213ENST00000637540 H1FXQ92522 213 aaKnown RBP3.88□□□□□ -1.79
SCN8A-213ENST00000637540 TMEM186Q96B77 213 aa3.88□□□□□ -1.79
SCN8A-213ENST00000637540 AJUBAQ96IF1 538 aa3.88□□□□□ -1.79
SCN8A-213ENST00000637540 TMEM147Q9BVK8 224 aa3.88□□□□□ -1.79
SCN8A-213ENST00000637540 GGACTQ9BVM4 153 aa3.88□□□□□ -1.79
SCN8A-213ENST00000637540 RAB1BQ9H0U4 201 aa3.88□□□□□ -1.79
SCN8A-213ENST00000637540 TMEM231Q9H6L2 316 aa3.88□□□□□ -1.79
SCN8A-213ENST00000637540 UNKLQ9H9P5 680 aaKnown RBP3.88□□□□□ -1.79
SCN8A-213ENST00000637540 NDUFA4L2Q9NRX3 87 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms