RNA–Protein interactions for RNA: ENST00000637538.1

CLCN2-220, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 1,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-220ENST00000637538 ARL6Q9H0F7 186 aa13.47□□□□□ -0.25
CLCN2-220ENST00000637538 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.47□□□□□ -0.25
CLCN2-220ENST00000637538 HSPB7Q9UBY9 170 aa13.47□□□□□ -0.25
CLCN2-220ENST00000637538 UBQLN2Q9UHD9 624 aa13.47□□□□□ -0.25
CLCN2-220ENST00000637538 LSM5Q9Y4Y9 91 aaKnown RBP13.47□□□□□ -0.25
CLCN2-220ENST00000637538 IGHV3-72A0A0B4J1Y9 119 aa13.46□□□□□ -0.25
CLCN2-220ENST00000637538 TIMM23O14925 209 aa13.46□□□□□ -0.25
CLCN2-220ENST00000637538 NPFFO15130 113 aa13.46□□□□□ -0.25
CLCN2-220ENST00000637538 POLR2GP62487 172 aaKnown RBP eCLIP13.46□□□□□ -0.25
CLCN2-220ENST00000637538 SSX9Q7RTT3 188 aa13.46□□□□□ -0.25
CLCN2-220ENST00000637538 MOB3BQ86TA1 216 aa13.46□□□□□ -0.25
CLCN2-220ENST00000637538 FOXRED2Q8IWF2 684 aa13.46□□□□□ -0.25
CLCN2-220ENST00000637538 PIP4P2Q8N4L2 257 aa13.46□□□□□ -0.25
CLCN2-220ENST00000637538 WFDC11Q8NEX6 87 aa13.46□□□□□ -0.25
CLCN2-220ENST00000637538 HARBI1Q96MB7 349 aa13.46□□□□□ -0.25
CLCN2-220ENST00000637538 AIFM2Q9BRQ8 373 aa13.46□□□□□ -0.25
CLCN2-220ENST00000637538 HILPDAQ9Y5L2 63 aa13.46□□□□□ -0.25
CLCN2-220ENST00000637538 NF1P21359 2839 aa13.46□□□□□ -0.26
CLCN2-220ENST00000637538 HIVEP1P15822 2718 aa13.45□□□□□ -0.26
CLCN2-220ENST00000637538 TRAV3A0A0B4J244 114 aa13.45□□□□□ -0.26
CLCN2-220ENST00000637538 IGHV1-69DA0A0B4J2H0 117 aa13.45□□□□□ -0.26
CLCN2-220ENST00000637538 SHOXO15266 292 aa13.45□□□□□ -0.26
CLCN2-220ENST00000637538 IGHV1-69P01742 117 aa13.45□□□□□ -0.26
CLCN2-220ENST00000637538 RLN2P04090 185 aa13.45□□□□□ -0.26
CLCN2-220ENST00000637538 SAA1P0DJI8 122 aaPredicted RBP13.45□□□□□ -0.26
CLCN2-220ENST00000637538 CD1BP29016 333 aa13.45□□□□□ -0.26
CLCN2-220ENST00000637538 SAA4P35542 130 aa13.45□□□□□ -0.26
CLCN2-220ENST00000637538 LGALS4P56470 323 aa13.45□□□□□ -0.26
CLCN2-220ENST00000637538 EXOSC2Q13868 293 aaKnown RBP13.45□□□□□ -0.26
CLCN2-220ENST00000637538 PDLIM3Q53GG5 364 aaPredicted RBP13.45□□□□□ -0.26
CLCN2-220ENST00000637538 DCUN1D4Q92564 292 aa13.45□□□□□ -0.26
CLCN2-220ENST00000637538 MALSU1Q96EH3 234 aa13.45□□□□□ -0.26
CLCN2-220ENST00000637538 RITA1Q96K30 269 aa13.45□□□□□ -0.26
CLCN2-220ENST00000637538 MS4A7Q9GZW8 240 aaPredicted RBP13.45□□□□□ -0.26
CLCN2-220ENST00000637538 MAGT1Q9H0U3 335 aa13.45□□□□□ -0.26
CLCN2-220ENST00000637538 C7orf69Q9H7B7 122 aa13.45□□□□□ -0.26
CLCN2-220ENST00000637538 BET1LQ9NYM9 111 aa13.45□□□□□ -0.26
CLCN2-220ENST00000637538 J3QLI3 93 aa13.44□□□□□ -0.26
CLCN2-220ENST00000637538 VENTXO95231 258 aa13.44□□□□□ -0.26
CLCN2-220ENST00000637538 TMEM50AO95807 157 aa13.44□□□□□ -0.26
CLCN2-220ENST00000637538 AVPP01185 164 aa13.44□□□□□ -0.26
CLCN2-220ENST00000637538 LGALS7P47929 136 aa13.44□□□□□ -0.26
CLCN2-220ENST00000637538 TNFRSF9Q07011 255 aa13.44□□□□□ -0.26
CLCN2-220ENST00000637538 CCDC144NLQ6NUI1 221 aa13.44□□□□□ -0.26
CLCN2-220ENST00000637538 SLC51BQ86UW2 128 aa13.44□□□□□ -0.26
CLCN2-220ENST00000637538 ZNF429Q86V71 674 aa13.44□□□□□ -0.26
CLCN2-220ENST00000637538 INO80EQ8NBZ0 244 aaPredicted RBP13.44□□□□□ -0.26
CLCN2-220ENST00000637538 AQP10Q96PS8 301 aa13.44□□□□□ -0.26
CLCN2-220ENST00000637538 RNF5Q99942 180 aa13.44□□□□□ -0.26
CLCN2-220ENST00000637538 TMEM14BQ9NUH8 114 aa13.44□□□□□ -0.26
CLCN2-220ENST00000637538 NSG2Q9Y328 171 aa13.44□□□□□ -0.26
CLCN2-220ENST00000637538 F8P00451 2351 aa13.44□□□□□ -0.26
CLCN2-220ENST00000637538 MSGN1A6NI15 193 aa13.44□□□□□ -0.26
CLCN2-220ENST00000637538 E5RGE8 158 aa13.44□□□□□ -0.26
CLCN2-220ENST00000637538 UPK2O00526 184 aa13.44□□□□□ -0.26
CLCN2-220ENST00000637538 KCNAB3O43448 404 aa13.44□□□□□ -0.26
CLCN2-220ENST00000637538 NXPH3O95157 252 aa13.44□□□□□ -0.26
CLCN2-220ENST00000637538 CFDP00746 253 aaPredicted RBP13.44□□□□□ -0.26
CLCN2-220ENST00000637538 PAX9P55771 341 aa13.44□□□□□ -0.26
CLCN2-220ENST00000637538 UBE2KP61086 200 aa13.44□□□□□ -0.26
CLCN2-220ENST00000637538 RPS16P62249 146 aaKnown RBP13.44□□□□□ -0.26
CLCN2-220ENST00000637538 SSX2Q16385 188 aa13.44□□□□□ -0.26
CLCN2-220ENST00000637538 KLF17Q5JT82 389 aaPredicted RBP13.44□□□□□ -0.26
CLCN2-220ENST00000637538 QTRT1Q9BXR0 403 aaKnown RBP13.44□□□□□ -0.26
CLCN2-220ENST00000637538 FOXA2Q9Y261 457 aaPredicted RBP13.44□□□□□ -0.26
CLCN2-220ENST00000637538 TRAV40A0A0B4J280 105 aa13.43□□□□□ -0.26
CLCN2-220ENST00000637538 C15orf61A6NNL5 157 aa13.43□□□□□ -0.26
CLCN2-220ENST00000637538 SYNGR2O43760 224 aa13.43□□□□□ -0.26
CLCN2-220ENST00000637538 CHST1O43916 411 aa13.43□□□□□ -0.26
CLCN2-220ENST00000637538 SSSCA1O60232 199 aa13.43□□□□□ -0.26
CLCN2-220ENST00000637538 CRYGBP07316 175 aa13.43□□□□□ -0.26
CLCN2-220ENST00000637538 IGHV4-38-2P0DP08 117 aa13.43□□□□□ -0.26
CLCN2-220ENST00000637538 PAX6P26367 422 aa13.43□□□□□ -0.26
CLCN2-220ENST00000637538 P2RY1P47900 373 aa13.43□□□□□ -0.26
CLCN2-220ENST00000637538 OR2B8PP59922 312 aa13.43□□□□□ -0.26
CLCN2-220ENST00000637538 EBI3Q14213 229 aa13.43□□□□□ -0.26
CLCN2-220ENST00000637538 MRGPRG-AS1Q2M3A8 158 aa13.43□□□□□ -0.26
CLCN2-220ENST00000637538 CLLU1Q5K131 121 aa13.43□□□□□ -0.26
CLCN2-220ENST00000637538 OR52E5Q8NH55 327 aa13.43□□□□□ -0.26
CLCN2-220ENST00000637538 TMEM167AQ8TBQ9 72 aa13.43□□□□□ -0.26
CLCN2-220ENST00000637538 SVEP1Q4LDE5 3571 aa13.43□□□□□ -0.26
CLCN2-220ENST00000637538 KBTBD11O94819 623 aa13.42□□□□□ -0.26
CLCN2-220ENST00000637538 TGFAP01135 160 aa13.42□□□□□ -0.26
CLCN2-220ENST00000637538 FGF2P09038 288 aa13.42□□□□□ -0.26
CLCN2-220ENST00000637538 HKR1P10072 659 aa13.42□□□□□ -0.26
CLCN2-220ENST00000637538 RAB14P61106 215 aa13.42□□□□□ -0.26
CLCN2-220ENST00000637538 RUSC1-AS1Q66K80 236 aa13.42□□□□□ -0.26
CLCN2-220ENST00000637538 OR4A16Q8NH70 328 aa13.42□□□□□ -0.26
CLCN2-220ENST00000637538 OR4A5Q8NH83 315 aa13.42□□□□□ -0.26
CLCN2-220ENST00000637538 RAB40CQ96S21 281 aa13.42□□□□□ -0.26
CLCN2-220ENST00000637538 TMUB1Q9BVT8 246 aa13.42□□□□□ -0.26
CLCN2-220ENST00000637538 RBKSQ9H477 322 aa13.42□□□□□ -0.26
CLCN2-220ENST00000637538 ZFHX3Q15911 3703 aa13.42□□□□□ -0.26
CLCN2-220ENST00000637538 KANTRA0A1W2PQU2 76 aa13.41□□□□□ -0.26
CLCN2-220ENST00000637538 LINC00862A6NCI5 91 aa13.41□□□□□ -0.26
CLCN2-220ENST00000637538 BCL2L11O43521 198 aa13.41□□□□□ -0.26
CLCN2-220ENST00000637538 NUP62P37198 522 aaPredicted RBP13.41□□□□□ -0.26
CLCN2-220ENST00000637538 AP2S1P53680 142 aaPredicted RBP13.41□□□□□ -0.26
CLCN2-220ENST00000637538 UBA52P62987 128 aaKnown RBP13.41□□□□□ -0.26
CLCN2-220ENST00000637538 FBLN7Q53RD9 439 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms