RNA–Protein interactions for RNA: ENST00000636559.1

SMARCA2-252, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2 BASIC

Gene SMARCA2, Length 6,853 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-252ENST00000636559 TRAF4Q9BUZ4 470 aaPredicted RBP6.54□□□□□ -1.36
SMARCA2-252ENST00000636559 OR51M1Q9H341 326 aa6.54□□□□□ -1.36
SMARCA2-252ENST00000636559 IGHV3-48P01763 117 aa6.54□□□□□ -1.36
SMARCA2-252ENST00000636559 IBA57Q5T440 356 aaKnown RBP6.54□□□□□ -1.36
SMARCA2-252ENST00000636559 RTN4RL2Q86UN3 420 aa6.54□□□□□ -1.36
SMARCA2-252ENST00000636559 C19orf24Q9BVV8 132 aa6.54□□□□□ -1.36
SMARCA2-252ENST00000636559 E9PLN8 166 aa6.54□□□□□ -1.36
SMARCA2-252ENST00000636559 F12P00748 615 aaPredicted RBP6.54□□□□□ -1.36
SMARCA2-252ENST00000636559 RPL7P18124 248 aaKnown RBP6.54□□□□□ -1.36
SMARCA2-252ENST00000636559 LY6DQ14210 128 aa6.54□□□□□ -1.36
SMARCA2-252ENST00000636559 VKORC1Q9BQB6 163 aa6.54□□□□□ -1.36
SMARCA2-252ENST00000636559 SH3BGRL3Q9H299 93 aa6.54□□□□□ -1.36
SMARCA2-252ENST00000636559 HSPB8Q9UJY1 196 aa6.54□□□□□ -1.36
SMARCA2-252ENST00000636559 PROB1E7EW31 1015 aa6.54□□□□□ -1.36
SMARCA2-252ENST00000636559 HERVK_113P61574 105 aa6.54□□□□□ -1.36
SMARCA2-252ENST00000636559 RNFT1Q5M7Z0 435 aa6.54□□□□□ -1.36
SMARCA2-252ENST00000636559 ZNF362Q5T0B9 420 aaPredicted RBP6.54□□□□□ -1.36
SMARCA2-252ENST00000636559 MYOZ3Q8TDC0 251 aa6.54□□□□□ -1.36
SMARCA2-252ENST00000636559 PLSCR2Q9NRY7 297 aa6.54□□□□□ -1.36
SMARCA2-252ENST00000636559 LINC00312Q9Y6C7 94 aa6.54□□□□□ -1.36
SMARCA2-252ENST00000636559 NPPCP23582 126 aa6.54□□□□□ -1.36
SMARCA2-252ENST00000636559 SLC25A33Q9BSK2 321 aa6.54□□□□□ -1.36
SMARCA2-252ENST00000636559 CEP250Q9BV73 2442 aa6.54□□□□□ -1.36
SMARCA2-252ENST00000636559 MDC1Q14676 2089 aaKnown RBP6.54□□□□□ -1.36
SMARCA2-252ENST00000636559 TRAV34A0A0B4J273 112 aa6.54□□□□□ -1.36
SMARCA2-252ENST00000636559 CA2P00918 260 aa6.54□□□□□ -1.36
SMARCA2-252ENST00000636559 KIR2DL2P43627 348 aaPredicted RBP6.54□□□□□ -1.36
SMARCA2-252ENST00000636559 RAB9AP51151 201 aa6.54□□□□□ -1.36
SMARCA2-252ENST00000636559 SEMA5BQ9P283 1151 aa6.54□□□□□ -1.36
SMARCA2-252ENST00000636559 TBR1Q16650 682 aa6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 NABP2Q9BQ15 211 aa6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 PLXNA3P51805 1871 aa6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 IGKV1D-33P01593 117 aa6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 IGKV1-33P01594 117 aa6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 CDKN1AP38936 164 aa6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 RND3P61587 244 aa6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 SYT8Q8NBV8 401 aa6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 OR4B1Q8NGF8 309 aa6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 LYZL4Q96KX0 146 aa6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 FBXL15Q9H469 300 aa6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 CBLN4Q9NTU7 201 aa6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 J3QR89 54 aa6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 MAS1LP35410 378 aa6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 FAM3BP58499 235 aaPredicted RBP6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 RRN3P1Q2M238 152 aa6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 DDB2Q92466 427 aa6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 MRPL32Q9BYC8 188 aaKnown RBP6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 IGHV1-18A0A0C4DH31 117 aa6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 C17orf98A8MV24 154 aa6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 OR4A47Q6IF82 309 aa6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 GGNQ86UU5 652 aa6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 OR11H4Q8NGC9 324 aa6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 PACRGQ96M98 296 aaPredicted RBP6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 SDHCQ99643 169 aaPredicted RBP6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 PRO1933Q9H354 126 aa6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 IGKV3D-15A0A087WSY6 115 aa6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 TRGV3P03979 118 aa6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 RNF224P0DH78 156 aa6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 CCL1P22362 96 aa6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 OR8A1Q8NGG7 326 aa6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 FAM131CQ96AQ9 280 aa6.53□□□□□ -1.36
SMARCA2-252ENST00000636559 LOC389332A0A1B0GUA5 103 aa6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 CD8AP01732 235 aa6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 IL4P05112 153 aa6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 Q5BKY6 102 aa6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 IGHV3OR16-12A0A075B7B8 117 aa6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 EFNA2O43921 213 aa6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 MOSP00540 346 aa6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 UCP1P25874 307 aa6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 MST1P26927 711 aa6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 RPL29P47914 159 aaKnown RBP6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 DHRS11Q6UWP2 260 aa6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 ZIC4Q8N9L1 334 aa6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 SPSB4Q96A44 273 aa6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 C7orf69Q9H7B7 122 aa6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 IGHV3-35A0A0C4DH35 117 aa6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 PTBP3O95758 552 aaKnown RBP6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 DANCRP0C864 163 aa6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 FOXF2Q12947 444 aa6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 WDR82Q6UXN9 313 aa6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 GALNT14Q96FL9 552 aa6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 EIF3GO75821 320 aaKnown RBP eCLIP6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 SCGB1D4Q6XE38 83 aa6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 PLPPR1Q8TBJ4 325 aa6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 RAX2Q96IS3 184 aa6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 DUX5Q96PT3 197 aa6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 RTBDNQ9BSG5 229 aaPredicted RBP6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 MRPL20Q9BYC9 149 aaKnown RBP6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 TIMP3P35625 211 aa6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 Q0VFX4 171 aa6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 CYP2G1PQ6ZSU1 146 aa6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 GATAD1Q8WUU5 269 aa6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 RARRES2Q99969 163 aa6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 ZNF318Q5VUA4 2279 aa6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 IGKV1-9A0A0C4DH69 117 aa6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 H3BTX0 84 aa6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 CRYBB3P26998 211 aa6.52□□□□□ -1.37
SMARCA2-252ENST00000636559 KIF26BQ2KJY2 2108 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms