RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 TRBV7-1A0A0A6YYK4 115 aa13.16□□□□□ -0.3
CLN6-212ENST00000636020 CREBL2O60519 120 aaPredicted RBP13.16□□□□□ -0.3
CLN6-212ENST00000636020 AMBPP02760 352 aa13.16□□□□□ -0.3
CLN6-212ENST00000636020 GSTT2P0CG29 244 aa13.16□□□□□ -0.3
CLN6-212ENST00000636020 GSTT2BP0CG30 244 aa13.16□□□□□ -0.3
CLN6-212ENST00000636020 RBMY1A1P0DJD3 496 aaKnown RBP13.16□□□□□ -0.3
CLN6-212ENST00000636020 RBMY1CP0DJD4 496 aa13.16□□□□□ -0.3
CLN6-212ENST00000636020 SAA1P0DJI8 122 aaPredicted RBP13.16□□□□□ -0.3
CLN6-212ENST00000636020 TPBGQ13641 420 aa13.16□□□□□ -0.3
CLN6-212ENST00000636020 TMEM187Q14656 261 aa13.16□□□□□ -0.3
CLN6-212ENST00000636020 RBMY1FQ15415 496 aaKnown RBP13.16□□□□□ -0.3
CLN6-212ENST00000636020 SOHLH1Q5JUK2 328 aa13.16□□□□□ -0.3
CLN6-212ENST00000636020 OR2G6Q5TZ20 316 aa13.16□□□□□ -0.3
CLN6-212ENST00000636020 OSR1Q8TAX0 266 aaPredicted RBP13.16□□□□□ -0.3
CLN6-212ENST00000636020 FYTTD1Q96QD9 318 aaKnown RBP13.16□□□□□ -0.3
CLN6-212ENST00000636020 NICN1Q9BSH3 213 aa13.16□□□□□ -0.3
CLN6-212ENST00000636020 ZNF436Q9C0F3 470 aaPredicted RBP13.16□□□□□ -0.3
CLN6-212ENST00000636020 DPPA5A6NC42 116 aa13.15□□□□□ -0.3
CLN6-212ENST00000636020 MFSD2BA6NFX1 497 aa13.15□□□□□ -0.3
CLN6-212ENST00000636020 CA1P00915 261 aaPredicted RBP13.15□□□□□ -0.3
CLN6-212ENST00000636020 CRYGCP07315 174 aa13.15□□□□□ -0.3
CLN6-212ENST00000636020 IL6RP08887 468 aaPredicted RBP13.15□□□□□ -0.3
CLN6-212ENST00000636020 SMN1Q16637 294 aaKnown RBP13.15□□□□□ -0.3
CLN6-212ENST00000636020 YIF1BQ5BJH7 314 aa13.15□□□□□ -0.3
CLN6-212ENST00000636020 RBM48Q5RL73 367 aaKnown RBP13.15□□□□□ -0.3
CLN6-212ENST00000636020 TM2D1Q9BX74 207 aa13.15□□□□□ -0.3
CLN6-212ENST00000636020 TMEM59Q9BXS4 323 aa13.15□□□□□ -0.3
CLN6-212ENST00000636020 YTHDF1Q9BYJ9 559 aaKnown RBP13.15□□□□□ -0.3
CLN6-212ENST00000636020 SLC2A9Q9NRM0 540 aa13.15□□□□□ -0.3
CLN6-212ENST00000636020 PLEKHJ1Q9NW61 149 aa13.15□□□□□ -0.3
CLN6-212ENST00000636020 AK3Q9UIJ7 227 aa13.15□□□□□ -0.3
CLN6-212ENST00000636020 IGLV2-18A0A075B6J9 118 aa13.14□□□□□ -0.31
CLN6-212ENST00000636020 E7EUB6 86 aa13.14□□□□□ -0.31
CLN6-212ENST00000636020 TNFAIP8O95379 198 aa13.14□□□□□ -0.31
CLN6-212ENST00000636020 LALBAP00709 142 aa13.14□□□□□ -0.31
CLN6-212ENST00000636020 CTSDP07339 412 aaPredicted RBP13.14□□□□□ -0.31
CLN6-212ENST00000636020 KCTD21Q4G0X4 260 aa13.14□□□□□ -0.31
CLN6-212ENST00000636020 TMEM190Q8WZ59 177 aa13.14□□□□□ -0.31
CLN6-212ENST00000636020 PLCXD1Q9NUJ7 323 aa13.14□□□□□ -0.31
CLN6-212ENST00000636020 BABAM2Q9NXR7 383 aa13.14□□□□□ -0.31
CLN6-212ENST00000636020 IGHV4-28A0A0C4DH34 117 aa13.13□□□□□ -0.31
CLN6-212ENST00000636020 A0A1B0GW64 132 aa13.13□□□□□ -0.31
CLN6-212ENST00000636020 UBBP0CG47 229 aa13.13□□□□□ -0.31
CLN6-212ENST00000636020 AREGP15514 252 aa13.13□□□□□ -0.31
CLN6-212ENST00000636020 HIST1H1BP16401 226 aaKnown RBP13.13□□□□□ -0.31
CLN6-212ENST00000636020 CRHBPP24387 322 aa13.13□□□□□ -0.31
CLN6-212ENST00000636020 GPR183P32249 361 aa13.13□□□□□ -0.31
CLN6-212ENST00000636020 ETV1P50549 477 aa13.13□□□□□ -0.31
CLN6-212ENST00000636020 PLET1Q6UQ28 207 aa13.13□□□□□ -0.31
CLN6-212ENST00000636020 NKAIN3Q8N8D7 197 aa13.13□□□□□ -0.31
CLN6-212ENST00000636020 ZNF502Q8TBZ5 544 aa13.13□□□□□ -0.31
CLN6-212ENST00000636020 ADTRPQ96IZ2 230 aa13.13□□□□□ -0.31
CLN6-212ENST00000636020 PGLYRP3Q96LB9 341 aa13.13□□□□□ -0.31
CLN6-212ENST00000636020 CXorf58Q96LI9 332 aa13.13□□□□□ -0.31
CLN6-212ENST00000636020 DAZ1Q9NQZ3 744 aaKnown RBP13.13□□□□□ -0.31
CLN6-212ENST00000636020 UBR4Q5T4S7 5183 aa13.12□□□□□ -0.31
CLN6-212ENST00000636020 IGLV11-55A0A075B6I3 123 aa13.12□□□□□ -0.31
CLN6-212ENST00000636020 A0A0A6YYD4 124 aa13.12□□□□□ -0.31
CLN6-212ENST00000636020 LINC00473A8K010 186 aa13.12□□□□□ -0.31
CLN6-212ENST00000636020 DHFRP00374 187 aa13.12□□□□□ -0.31
CLN6-212ENST00000636020 ZNF735P0CB33 412 aa13.12□□□□□ -0.31
CLN6-212ENST00000636020 SMIM18P0DKX4 95 aa13.12□□□□□ -0.31
CLN6-212ENST00000636020 RPA2P15927 270 aa13.12□□□□□ -0.31
CLN6-212ENST00000636020 SRMP19623 302 aa13.12□□□□□ -0.31
CLN6-212ENST00000636020 DUTP33316 252 aaKnown RBP13.12□□□□□ -0.31
CLN6-212ENST00000636020 CMC4P56277 68 aaPredicted RBP13.12□□□□□ -0.31
CLN6-212ENST00000636020 GABARAPL2P60520 117 aa13.12□□□□□ -0.31
CLN6-212ENST00000636020 TMPRSS11AQ6ZMR5 421 aa13.12□□□□□ -0.31
CLN6-212ENST00000636020 Q6ZRM9 215 aa13.12□□□□□ -0.31
CLN6-212ENST00000636020 BPIFB6Q8NFQ5 453 aa13.12□□□□□ -0.31
CLN6-212ENST00000636020 Q96MT0 163 aa13.12□□□□□ -0.31
CLN6-212ENST00000636020 DERL3Q96Q80 235 aa13.12□□□□□ -0.31
CLN6-212ENST00000636020 CHRDL1Q9BU40 450 aa13.12□□□□□ -0.31
CLN6-212ENST00000636020 NDUFAF3Q9BU61 184 aa13.12□□□□□ -0.31
CLN6-212ENST00000636020 FGF20Q9NP95 211 aaPredicted RBP13.12□□□□□ -0.31
CLN6-212ENST00000636020 FKBP14Q9NWM8 211 aa13.12□□□□□ -0.31
CLN6-212ENST00000636020 FAT1Q14517 4588 aa13.12□□□□□ -0.31
CLN6-212ENST00000636020 DEFB131BA0A096LNP1 70 aa13.11□□□□□ -0.31
CLN6-212ENST00000636020 TRDCB7Z8K6 153 aa13.11□□□□□ -0.31
CLN6-212ENST00000636020 CD3GP09693 182 aa13.11□□□□□ -0.31
CLN6-212ENST00000636020 RPL27AP46776 148 aaKnown RBP13.11□□□□□ -0.31
CLN6-212ENST00000636020 SERPINB10P48595 397 aa13.11□□□□□ -0.31
CLN6-212ENST00000636020 UNC119Q13432 240 aa13.11□□□□□ -0.31
CLN6-212ENST00000636020 C1orf134Q5TEV5 83 aa13.11□□□□□ -0.31
CLN6-212ENST00000636020 GGHQ92820 318 aa13.11□□□□□ -0.31
CLN6-212ENST00000636020 OR51E2Q9H255 320 aa13.11□□□□□ -0.31
CLN6-212ENST00000636020 C12orf4Q9NQ89 552 aa13.11□□□□□ -0.31
CLN6-212ENST00000636020 BLOC1S6Q9UL45 172 aa13.11□□□□□ -0.31
CLN6-212ENST00000636020 SOCS1O15524 211 aa13.1□□□□□ -0.31
CLN6-212ENST00000636020 IFNA10P01566 189 aa13.1□□□□□ -0.31
CLN6-212ENST00000636020 SSX9Q7RTT3 188 aa13.1□□□□□ -0.31
CLN6-212ENST00000636020 CENPSQ8N2Z9 138 aa13.1□□□□□ -0.31
CLN6-212ENST00000636020 KCNK15Q9H427 330 aa13.1□□□□□ -0.31
CLN6-212ENST00000636020 DUSP21Q9H596 190 aa13.1□□□□□ -0.31
CLN6-212ENST00000636020 PSORS1C1Q9UIG5 152 aa13.1□□□□□ -0.31
CLN6-212ENST00000636020 TPRKBQ9Y3C4 175 aa13.1□□□□□ -0.31
CLN6-212ENST00000636020 ELOA3CA0A087WX78 387 aaPredicted RBP13.09□□□□□ -0.31
CLN6-212ENST00000636020 C15orf61A6NNL5 157 aa13.09□□□□□ -0.31
CLN6-212ENST00000636020 MRPS14O60783 128 aaKnown RBP13.09□□□□□ -0.31
CLN6-212ENST00000636020 CD74P04233 296 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms