RNA–Protein interactions for RNA: ENST00000635893.1

SCN1A-211, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 168 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-211ENST00000635893 HYPMO75409 117 aa-0.76□□□□□ -2.53
SCN1A-211ENST00000635893 SNAP29O95721 258 aa-0.76□□□□□ -2.53
SCN1A-211ENST00000635893 AGTR1P30556 359 aa-0.76□□□□□ -2.53
SCN1A-211ENST00000635893 DAD1P61803 113 aa-0.76□□□□□ -2.53
SCN1A-211ENST00000635893 NDUFA5Q16718 116 aa-0.76□□□□□ -2.53
SCN1A-211ENST00000635893 CDRT4Q8N9R6 151 aa-0.76□□□□□ -2.53
SCN1A-211ENST00000635893 OR5B17Q8NGF7 314 aa-0.76□□□□□ -2.53
SCN1A-211ENST00000635893 AGR3Q8TD06 166 aa-0.76□□□□□ -2.53
SCN1A-211ENST00000635893 Q8WTZ3 238 aa-0.76□□□□□ -2.53
SCN1A-211ENST00000635893 COMMD9Q9P000 198 aa-0.76□□□□□ -2.53
SCN1A-211ENST00000635893 TTC41PQ6P2S7 1318 aa-0.76□□□□□ -2.53
SCN1A-211ENST00000635893 CHD2O14647 1828 aaKnown RBP-0.76□□□□□ -2.53
SCN1A-211ENST00000635893 NF1P21359 2839 aa-0.77□□□□□ -2.53
SCN1A-211ENST00000635893 TTC21AQ8NDW8 1320 aa-0.77□□□□□ -2.53
SCN1A-211ENST00000635893 INE1O15225 51 aa-0.77□□□□□ -2.53
SCN1A-211ENST00000635893 MSMBP08118 114 aa-0.77□□□□□ -2.53
SCN1A-211ENST00000635893 GRPRP30550 384 aa-0.77□□□□□ -2.53
SCN1A-211ENST00000635893 SNAP25P60880 206 aa-0.77□□□□□ -2.53
SCN1A-211ENST00000635893 CNBPP62633 177 aaKnown RBP-0.77□□□□□ -2.53
SCN1A-211ENST00000635893 RASSF6Q6ZTQ3 369 aa-0.77□□□□□ -2.53
SCN1A-211ENST00000635893 MRPL52Q86TS9 123 aaKnown RBP-0.77□□□□□ -2.53
SCN1A-211ENST00000635893 RAB2BQ8WUD1 216 aa-0.77□□□□□ -2.53
SCN1A-211ENST00000635893 MS4A6EQ96DS6 147 aa-0.77□□□□□ -2.53
SCN1A-211ENST00000635893 ZNHIT6Q9NWK9 470 aaKnown RBP-0.77□□□□□ -2.53
SCN1A-211ENST00000635893 EPPK1P58107 5090 aaKnown RBP-0.77□□□□□ -2.53
SCN1A-211ENST00000635893 EML6Q6ZMW3 1958 aa-0.77□□□□□ -2.53
SCN1A-211ENST00000635893 ANAPC1Q9H1A4 1944 aa-0.77□□□□□ -2.53
SCN1A-211ENST00000635893 THSD7AQ9UPZ6 1657 aa-0.78□□□□□ -2.53
SCN1A-211ENST00000635893 ADGRB2O60241 1585 aa-0.78□□□□□ -2.53
SCN1A-211ENST00000635893 CACNA1AO00555 2505 aa-0.78□□□□□ -2.53
SCN1A-211ENST00000635893 CACNA1CQ13936 2221 aa-0.78□□□□□ -2.53
SCN1A-211ENST00000635893 TRAV8-1A0A0A6YYK1 113 aa-0.78□□□□□ -2.53
SCN1A-211ENST00000635893 GOLGA8RI6L899 631 aa-0.78□□□□□ -2.53
SCN1A-211ENST00000635893 FADS1O60427 444 aa-0.78□□□□□ -2.53
SCN1A-211ENST00000635893 STAG3L2P0CL84 134 aa-0.78□□□□□ -2.53
SCN1A-211ENST00000635893 HIST1H1CP16403 213 aaKnown RBP-0.78□□□□□ -2.53
SCN1A-211ENST00000635893 RPL30P62888 115 aaKnown RBP-0.78□□□□□ -2.53
SCN1A-211ENST00000635893 FKBP1AP62942 108 aaKnown RBP-0.78□□□□□ -2.53
SCN1A-211ENST00000635893 RAB31Q13636 194 aa-0.78□□□□□ -2.53
SCN1A-211ENST00000635893 SAPCD1Q5SSQ6 148 aa-0.78□□□□□ -2.53
SCN1A-211ENST00000635893 OR52K2Q8NGK3 314 aa-0.78□□□□□ -2.53
SCN1A-211ENST00000635893 DYNC2LI1Q8TCX1 351 aa-0.78□□□□□ -2.53
SCN1A-211ENST00000635893 FAM210AQ96ND0 272 aa-0.78□□□□□ -2.53
SCN1A-211ENST00000635893 HINT2Q9BX68 163 aa-0.78□□□□□ -2.53
SCN1A-211ENST00000635893 OR8D2Q9GZM6 311 aa-0.78□□□□□ -2.53
SCN1A-211ENST00000635893 LAMA5O15230 3695 aa-0.78□□□□□ -2.53
SCN1A-211ENST00000635893 DENND4CQ5VZ89 1909 aa-0.78□□□□□ -2.53
SCN1A-211ENST00000635893 HEATR5AQ86XA9 2040 aa-0.79□□□□□ -2.54
SCN1A-211ENST00000635893 TMED7-TICAM2A0A0A6YYA0 188 aa-0.79□□□□□ -2.54
SCN1A-211ENST00000635893 A0A1B0GW15 77 aa-0.79□□□□□ -2.54
SCN1A-211ENST00000635893 GSTTP1A0A1W2PQM5 241 aa-0.79□□□□□ -2.54
SCN1A-211ENST00000635893 C2orf70A6NJV1 201 aa-0.79□□□□□ -2.54
SCN1A-211ENST00000635893 COPEO14579 308 aa-0.79□□□□□ -2.54
SCN1A-211ENST00000635893 CASC3O15234 703 aaKnown RBP-0.79□□□□□ -2.54
SCN1A-211ENST00000635893 NSA2O95478 260 aaKnown RBP-0.79□□□□□ -2.54
SCN1A-211ENST00000635893 HLA-DQB2P05538 268 aa-0.79□□□□□ -2.54
SCN1A-211ENST00000635893 SLCO1A2P46721 670 aa-0.79□□□□□ -2.54
SCN1A-211ENST00000635893 FLOT2Q14254 428 aa-0.79□□□□□ -2.54
SCN1A-211ENST00000635893 EXOC3-AS1Q8N2X6 119 aa-0.79□□□□□ -2.54
SCN1A-211ENST00000635893 LRRC45Q96CN5 670 aa-0.79□□□□□ -2.54
SCN1A-211ENST00000635893 TLCD1Q96CP7 247 aa-0.79□□□□□ -2.54
SCN1A-211ENST00000635893 TMEM56Q96MV1 263 aa-0.79□□□□□ -2.54
SCN1A-211ENST00000635893 PRRT1Q99946 306 aa-0.79□□□□□ -2.54
SCN1A-211ENST00000635893 WNK2Q9Y3S1 2297 aa-0.79□□□□□ -2.54
SCN1A-211ENST00000635893 STARD9Q9P2P6 4700 aa-0.79□□□□□ -2.54
SCN1A-211ENST00000635893 MCM3APO60318 1980 aa-0.79□□□□□ -2.54
SCN1A-211ENST00000635893 ABCA2Q9BZC7 2435 aa-0.8□□□□□ -2.54
SCN1A-211ENST00000635893 TRBV6-8A0A0A6YYG3 113 aa-0.8□□□□□ -2.54
SCN1A-211ENST00000635893 LINC00854A0A1B0GVQ3 168 aa-0.8□□□□□ -2.54
SCN1A-211ENST00000635893 K7ERQ8 282 aa-0.8□□□□□ -2.54
SCN1A-211ENST00000635893 M0R378 163 aa-0.8□□□□□ -2.54
SCN1A-211ENST00000635893 LEPROTO15243 131 aa-0.8□□□□□ -2.54
SCN1A-211ENST00000635893 CLPSP04118 112 aa-0.8□□□□□ -2.54
SCN1A-211ENST00000635893 METTL15P1P0C7V9 234 aa-0.8□□□□□ -2.54
SCN1A-211ENST00000635893 LIMS3P0CW19 117 aa-0.8□□□□□ -2.54
SCN1A-211ENST00000635893 LIMS4P0CW20 117 aa-0.8□□□□□ -2.54
SCN1A-211ENST00000635893 KDELR1P24390 212 aa-0.8□□□□□ -2.54
SCN1A-211ENST00000635893 FXYD2P54710 66 aa-0.8□□□□□ -2.54
SCN1A-211ENST00000635893 RAB4BP61018 213 aa-0.8□□□□□ -2.54
SCN1A-211ENST00000635893 GNA13Q14344 377 aa-0.8□□□□□ -2.54
SCN1A-211ENST00000635893 STK38Q15208 465 aa-0.8□□□□□ -2.54
SCN1A-211ENST00000635893 GKN2Q86XP6 184 aa-0.8□□□□□ -2.54
SCN1A-211ENST00000635893 ERMAPQ96PL5 475 aaPredicted RBP-0.8□□□□□ -2.54
SCN1A-211ENST00000635893 UGT2B28Q9BY64 529 aa-0.8□□□□□ -2.54
SCN1A-211ENST00000635893 ACER3Q9NUN7 267 aa-0.8□□□□□ -2.54
SCN1A-211ENST00000635893 SETXQ7Z333 2677 aaKnown RBP-0.8□□□□□ -2.54
SCN1A-211ENST00000635893 DICER1Q9UPY3 1922 aaKnown RBP-0.8□□□□□ -2.54
SCN1A-211ENST00000635893 OR2T8A6NH00 312 aa-0.81□□□□□ -2.54
SCN1A-211ENST00000635893 SLC22A1O15245 554 aa-0.81□□□□□ -2.54
SCN1A-211ENST00000635893 ATP5G1P05496 136 aa-0.81□□□□□ -2.54
SCN1A-211ENST00000635893 ASAH2BP0C7U1 165 aa-0.81□□□□□ -2.54
SCN1A-211ENST00000635893 SULT1A3P0DMM9 295 aa-0.81□□□□□ -2.54
SCN1A-211ENST00000635893 SULT1A4P0DMN0 295 aa-0.81□□□□□ -2.54
SCN1A-211ENST00000635893 HLA-DMBP28068 263 aa-0.81□□□□□ -2.54
SCN1A-211ENST00000635893 MT4P47944 62 aa-0.81□□□□□ -2.54
SCN1A-211ENST00000635893 SUPT4H1P63272 117 aaKnown RBP-0.81□□□□□ -2.54
SCN1A-211ENST00000635893 KRTAP19-8Q3LI54 63 aa-0.81□□□□□ -2.54
SCN1A-211ENST00000635893 LRRC6Q86X45 466 aa-0.81□□□□□ -2.54
SCN1A-211ENST00000635893 LINC00311Q8N616 119 aa-0.81□□□□□ -2.54
SCN1A-211ENST00000635893 TMEM208Q9BTX3 173 aa-0.81□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms