RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 HAX1O00165 279 aa8.48□□□□□ -1.05
COL4A6-210ENST00000621266 HOXA3O43365 443 aaPredicted RBP8.48□□□□□ -1.05
COL4A6-210ENST00000621266 SAMD5Q5TGI4 173 aa8.48□□□□□ -1.05
COL4A6-210ENST00000621266 C1RLQ9NZP8 487 aa8.48□□□□□ -1.05
COL4A6-210ENST00000621266 TRPM7Q96QT4 1865 aa8.48□□□□□ -1.05
COL4A6-210ENST00000621266 PPIAL4EA0A075B759 164 aa8.48□□□□□ -1.05
COL4A6-210ENST00000621266 HRKO00198 91 aa8.48□□□□□ -1.05
COL4A6-210ENST00000621266 UBE2CO00762 179 aa8.48□□□□□ -1.05
COL4A6-210ENST00000621266 NPFFO15130 113 aa8.48□□□□□ -1.05
COL4A6-210ENST00000621266 PPIAL4FP0DN26 164 aa8.48□□□□□ -1.05
COL4A6-210ENST00000621266 AQP3Q92482 292 aa8.48□□□□□ -1.05
COL4A6-210ENST00000621266 PPIAL4AQ9Y536 164 aa8.48□□□□□ -1.05
COL4A6-210ENST00000621266 MYO16Q9Y6X6 1858 aa8.48□□□□□ -1.05
COL4A6-210ENST00000621266 BGLAPP02818 100 aa8.48□□□□□ -1.05
COL4A6-210ENST00000621266 KCNMB1Q16558 191 aa8.48□□□□□ -1.05
COL4A6-210ENST00000621266 POC1AQ8NBT0 407 aa8.48□□□□□ -1.05
COL4A6-210ENST00000621266 DPH3Q96FX2 82 aa8.48□□□□□ -1.05
COL4A6-210ENST00000621266 NABP2Q9BQ15 211 aa8.48□□□□□ -1.05
COL4A6-210ENST00000621266 RAB1BQ9H0U4 201 aa8.48□□□□□ -1.05
COL4A6-210ENST00000621266 ARID1AO14497 2285 aa8.48□□□□□ -1.05
COL4A6-210ENST00000621266 FAM181BA6NEQ2 426 aa8.48□□□□□ -1.05
COL4A6-210ENST00000621266 C17orf51A8MQB3 221 aa8.48□□□□□ -1.05
COL4A6-210ENST00000621266 SRP19P09132 144 aaKnown RBP8.48□□□□□ -1.05
COL4A6-210ENST00000621266 ORAOV1Q8WV07 137 aa8.48□□□□□ -1.05
COL4A6-210ENST00000621266 TNFRSF14Q92956 283 aa8.48□□□□□ -1.05
COL4A6-210ENST00000621266 RPL27AP46776 148 aaKnown RBP8.47□□□□□ -1.05
COL4A6-210ENST00000621266 STARD6P59095 220 aa8.47□□□□□ -1.05
COL4A6-210ENST00000621266 PSG9Q00887 426 aa8.47□□□□□ -1.05
COL4A6-210ENST00000621266 ISXQ2M1V0 245 aa8.47□□□□□ -1.05
COL4A6-210ENST00000621266 GAGE13Q4V321 117 aa8.47□□□□□ -1.05
COL4A6-210ENST00000621266 VKORC1L1Q8N0U8 176 aa8.47□□□□□ -1.05
COL4A6-210ENST00000621266 UCN2Q96RP3 112 aa8.47□□□□□ -1.05
COL4A6-210ENST00000621266 GGTLC2Q14390 218 aa8.47□□□□□ -1.05
COL4A6-210ENST00000621266 ABHD12Q8N2K0 398 aa8.47□□□□□ -1.05
COL4A6-210ENST00000621266 IGKV3D-20A0A0C4DH25 116 aa8.47□□□□□ -1.05
COL4A6-210ENST00000621266 MARCH11A6NNE9 402 aa8.47□□□□□ -1.05
COL4A6-210ENST00000621266 GPX1P07203 203 aa8.47□□□□□ -1.05
COL4A6-210ENST00000621266 SLC25A53Q5H9E4 307 aa8.47□□□□□ -1.05
COL4A6-210ENST00000621266 STPG3Q8N7X2 389 aa8.47□□□□□ -1.05
COL4A6-210ENST00000621266 OR2K2Q8NGT1 345 aa8.47□□□□□ -1.05
COL4A6-210ENST00000621266 FOCADQ5VW36 1801 aa8.47□□□□□ -1.05
COL4A6-210ENST00000621266 LOC390937A0A1W2PQ73 354 aa8.47□□□□□ -1.05
COL4A6-210ENST00000621266 FOXI3A8MTJ6 420 aaPredicted RBP8.47□□□□□ -1.05
COL4A6-210ENST00000621266 K7N7A8 449 aa8.47□□□□□ -1.05
COL4A6-210ENST00000621266 SPINT1O43278 529 aa8.47□□□□□ -1.05
COL4A6-210ENST00000621266 LAMTOR1Q6IAA8 161 aa8.47□□□□□ -1.05
COL4A6-210ENST00000621266 TMEM106BQ9NUM4 274 aa8.47□□□□□ -1.05
COL4A6-210ENST00000621266 TRAV5A0A0B4J249 113 aa8.47□□□□□ -1.05
COL4A6-210ENST00000621266 A8MWV9 139 aa8.47□□□□□ -1.05
COL4A6-210ENST00000621266 VENTXO95231 258 aa8.47□□□□□ -1.05
COL4A6-210ENST00000621266 ZNF585BQ52M93 769 aa8.47□□□□□ -1.05
COL4A6-210ENST00000621266 PILRBQ9UKJ0 227 aa8.47□□□□□ -1.05
COL4A6-210ENST00000621266 PRR19A6NJB7 356 aa8.46□□□□□ -1.05
COL4A6-210ENST00000621266 ZNF708P17019 499 aa8.46□□□□□ -1.05
COL4A6-210ENST00000621266 SRD5A2P31213 254 aa8.46□□□□□ -1.05
COL4A6-210ENST00000621266 LEPP41159 167 aa8.46□□□□□ -1.05
COL4A6-210ENST00000621266 HIST1H4AP62805 103 aaKnown RBP8.46□□□□□ -1.05
COL4A6-210ENST00000621266 TBR1Q16650 682 aa8.46□□□□□ -1.05
COL4A6-210ENST00000621266 OCIAD2Q56VL3 154 aa8.46□□□□□ -1.05
COL4A6-210ENST00000621266 RIPPLY2Q5TAB7 128 aa8.46□□□□□ -1.05
COL4A6-210ENST00000621266 NPDC1Q9NQX5 325 aaPredicted RBP8.46□□□□□ -1.05
COL4A6-210ENST00000621266 MSGN1A6NI15 193 aa8.46□□□□□ -1.05
COL4A6-210ENST00000621266 TMEM229AB2RXF0 380 aa8.46□□□□□ -1.05
COL4A6-210ENST00000621266 ESDP10768 282 aa8.46□□□□□ -1.05
COL4A6-210ENST00000621266 MFAP4P55083 255 aa8.46□□□□□ -1.05
COL4A6-210ENST00000621266 TMEM187Q14656 261 aa8.46□□□□□ -1.05
COL4A6-210ENST00000621266 RAB1CQ92928 201 aa8.46□□□□□ -1.05
COL4A6-210ENST00000621266 SAA1P0DJI8 122 aaPredicted RBP8.46□□□□□ -1.06
COL4A6-210ENST00000621266 SELENOTP62341 195 aa8.46□□□□□ -1.06
COL4A6-210ENST00000621266 RPL31P62899 125 aaKnown RBP8.46□□□□□ -1.06
COL4A6-210ENST00000621266 SRSF6Q13247 344 aaKnown RBP8.46□□□□□ -1.06
COL4A6-210ENST00000621266 GFI1BQ5VTD9 330 aa8.46□□□□□ -1.06
COL4A6-210ENST00000621266 ZNF562Q6V9R5 426 aa8.46□□□□□ -1.06
COL4A6-210ENST00000621266 TMEM74BQ9NUR3 256 aa8.46□□□□□ -1.06
COL4A6-210ENST00000621266 DICER1Q9UPY3 1922 aaKnown RBP8.46□□□□□ -1.06
COL4A6-210ENST00000621266 PLXNA1Q9UIW2 1896 aa8.46□□□□□ -1.06
COL4A6-210ENST00000621266 CGAP01215 116 aa8.46□□□□□ -1.06
COL4A6-210ENST00000621266 ATP5G3P48201 142 aa8.46□□□□□ -1.06
COL4A6-210ENST00000621266 LOXL4Q96JB6 756 aa8.46□□□□□ -1.06
COL4A6-210ENST00000621266 RSPO3Q9BXY4 272 aaPredicted RBP8.46□□□□□ -1.06
COL4A6-210ENST00000621266 NRXN2Q9P2S2 1712 aa8.46□□□□□ -1.06
COL4A6-210ENST00000621266 TRAV8-1A0A0A6YYK1 113 aa8.46□□□□□ -1.06
COL4A6-210ENST00000621266 ATP5LO75964 103 aa8.46□□□□□ -1.06
COL4A6-210ENST00000621266 IL11P20809 199 aa8.46□□□□□ -1.06
COL4A6-210ENST00000621266 TMEM105Q8N8V8 129 aa8.46□□□□□ -1.06
COL4A6-210ENST00000621266 OR51G1Q8NGK1 321 aa8.46□□□□□ -1.06
COL4A6-210ENST00000621266 PKIBQ9C010 78 aa8.46□□□□□ -1.06
COL4A6-210ENST00000621266 PLSCR4Q9NRQ2 329 aa8.46□□□□□ -1.06
COL4A6-210ENST00000621266 DLEC1Q9Y238 1755 aa8.46□□□□□ -1.06
COL4A6-210ENST00000621266 TRAV9-2A0A087WT02 112 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 A0A087WWC5 75 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 CENPVL1A0A0U1RR11 272 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 A0A1W2PQF6 199 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 ZNF818PQ6ZRF7 136 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 TMEM170AQ8WVE7 144 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 DDB2Q92466 427 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 RCC1LQ96I51 464 aaKnown RBP8.45□□□□□ -1.06
COL4A6-210ENST00000621266 RPRMQ9NS64 109 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 C9JCJ5 164 aa8.45□□□□□ -1.06
COL4A6-210ENST00000621266 SYNGR3O43761 229 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms