RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 WDFY4Q6ZS81 3184 aa8.72□□□□□ -1.01
VPS11-207ENST00000620429 IGHV3-20A0A0C4DH32 117 aa8.72□□□□□ -1.01
VPS11-207ENST00000620429 LRP5LA4QPB2 252 aa8.72□□□□□ -1.01
VPS11-207ENST00000620429 F5H5K5 113 aa8.72□□□□□ -1.01
VPS11-207ENST00000620429 H3BP45 60 aa8.72□□□□□ -1.01
VPS11-207ENST00000620429 NAPSAO96009 420 aa8.72□□□□□ -1.01
VPS11-207ENST00000620429 SLC25A6P12236 298 aa8.72□□□□□ -1.01
VPS11-207ENST00000620429 MYBPHQ13203 477 aa8.72□□□□□ -1.01
VPS11-207ENST00000620429 TRIP6Q15654 476 aaKnown RBP8.72□□□□□ -1.01
VPS11-207ENST00000620429 ZNF441Q8N8Z8 693 aa8.72□□□□□ -1.01
VPS11-207ENST00000620429 ST6GALNAC6Q969X2 333 aa8.72□□□□□ -1.01
VPS11-207ENST00000620429 C10orf35Q96D05 121 aa8.72□□□□□ -1.01
VPS11-207ENST00000620429 LYZL4Q96KX0 146 aa8.72□□□□□ -1.01
VPS11-207ENST00000620429 JMJD8Q96S16 334 aa8.72□□□□□ -1.01
VPS11-207ENST00000620429 FAM110AQ9BQ89 295 aa8.72□□□□□ -1.01
VPS11-207ENST00000620429 QTRT1Q9BXR0 403 aaKnown RBP8.72□□□□□ -1.01
VPS11-207ENST00000620429 TP73-AS1Q9UF72 201 aa8.72□□□□□ -1.01
VPS11-207ENST00000620429 CRXO43186 299 aaPredicted RBP8.71□□□□□ -1.01
VPS11-207ENST00000620429 RBMXL2O75526 392 aaKnown RBP8.71□□□□□ -1.01
VPS11-207ENST00000620429 NDUFB4O95168 129 aa8.71□□□□□ -1.01
VPS11-207ENST00000620429 NTF3P20783 257 aa8.71□□□□□ -1.01
VPS11-207ENST00000620429 FBLP22087 321 aaKnown RBP8.71□□□□□ -1.01
VPS11-207ENST00000620429 SSTR5P35346 364 aa8.71□□□□□ -1.01
VPS11-207ENST00000620429 GRB2P62993 217 aaKnown RBP8.71□□□□□ -1.01
VPS11-207ENST00000620429 ARF1P84077 181 aaKnown RBP8.71□□□□□ -1.01
VPS11-207ENST00000620429 ACSM6Q6P461 480 aa8.71□□□□□ -1.01
VPS11-207ENST00000620429 FOXI2Q6ZQN5 318 aa8.71□□□□□ -1.01
VPS11-207ENST00000620429 TMEM136Q6ZRR5 245 aa8.71□□□□□ -1.01
VPS11-207ENST00000620429 TBC1D26Q86UD7 250 aa8.71□□□□□ -1.01
VPS11-207ENST00000620429 APOBEC3DQ96AK3 386 aaPredicted RBP8.71□□□□□ -1.01
VPS11-207ENST00000620429 Q96M66 194 aa8.71□□□□□ -1.01
VPS11-207ENST00000620429 IL36GQ9NZH8 169 aa8.71□□□□□ -1.01
VPS11-207ENST00000620429 ASCC3Q8N3C0 2202 aaKnown RBP8.71□□□□□ -1.01
VPS11-207ENST00000620429 TRBV20OR9-2A0A075B6H5 130 aa8.71□□□□□ -1.02
VPS11-207ENST00000620429 SPAARA0A1B0GVQ0 90 aa8.71□□□□□ -1.02
VPS11-207ENST00000620429 PGPEP1LA6NFU8 196 aa8.71□□□□□ -1.02
VPS11-207ENST00000620429 HMGB3O15347 200 aaKnown RBP8.71□□□□□ -1.02
VPS11-207ENST00000620429 EFNA2O43921 213 aa8.71□□□□□ -1.02
VPS11-207ENST00000620429 SERPINE2P07093 398 aa8.71□□□□□ -1.02
VPS11-207ENST00000620429 FRMD6-AS1P0C7T7 363 aa8.71□□□□□ -1.02
VPS11-207ENST00000620429 CYB561P49447 251 aa8.71□□□□□ -1.02
VPS11-207ENST00000620429 RPEL1Q2QD12 228 aa8.71□□□□□ -1.02
VPS11-207ENST00000620429 SLC25A47Q6Q0C1 308 aa8.71□□□□□ -1.02
VPS11-207ENST00000620429 SPEM1Q8N4L4 309 aa8.71□□□□□ -1.02
VPS11-207ENST00000620429 OR4C12Q96R67 309 aa8.71□□□□□ -1.02
VPS11-207ENST00000620429 FGF21Q9NSA1 209 aa8.71□□□□□ -1.02
VPS11-207ENST00000620429 PIGLQ9Y2B2 252 aa8.71□□□□□ -1.02
VPS11-207ENST00000620429 TEX48A0A1B0GUV7 120 aa8.7□□□□□ -1.02
VPS11-207ENST00000620429 A0A1W2PNR3 127 aa8.7□□□□□ -1.02
VPS11-207ENST00000620429 TMEM8BA6NDV4 472 aa8.7□□□□□ -1.02
VPS11-207ENST00000620429 ANGPTL7O43827 346 aa8.7□□□□□ -1.02
VPS11-207ENST00000620429 NXPH3O95157 252 aa8.7□□□□□ -1.02
VPS11-207ENST00000620429 SRIP30626 198 aa8.7□□□□□ -1.02
VPS11-207ENST00000620429 PTGDSP41222 190 aa8.7□□□□□ -1.02
VPS11-207ENST00000620429 ODF1Q14990 250 aa8.7□□□□□ -1.02
VPS11-207ENST00000620429 LTC4SQ16873 150 aa8.7□□□□□ -1.02
VPS11-207ENST00000620429 TMEM249Q2WGJ8 235 aa8.7□□□□□ -1.02
VPS11-207ENST00000620429 ZNF788Q6ZQV5 615 aa8.7□□□□□ -1.02
VPS11-207ENST00000620429 OR10G9Q8NGN4 311 aa8.7□□□□□ -1.02
VPS11-207ENST00000620429 OR10G7Q8NGN6 311 aa8.7□□□□□ -1.02
VPS11-207ENST00000620429 C18orf32Q8TCD1 76 aa8.7□□□□□ -1.02
VPS11-207ENST00000620429 TXNDC17Q9BRA2 123 aa8.7□□□□□ -1.02
VPS11-207ENST00000620429 SCRT2Q9NQ03 307 aa8.7□□□□□ -1.02
VPS11-207ENST00000620429 TSSC4Q9Y5U2 329 aaPredicted RBP8.7□□□□□ -1.02
VPS11-207ENST00000620429 OR4C46A6NHA9 309 aa8.7□□□□□ -1.02
VPS11-207ENST00000620429 ANKRD30BLA7E2S9 258 aa8.7□□□□□ -1.02
VPS11-207ENST00000620429 K7ESF4 209 aa8.7□□□□□ -1.02
VPS11-207ENST00000620429 BMPR1BO00238 502 aa8.7□□□□□ -1.02
VPS11-207ENST00000620429 DHRS3O75911 302 aa8.7□□□□□ -1.02
VPS11-207ENST00000620429 AGFG2O95081 481 aa8.7□□□□□ -1.02
VPS11-207ENST00000620429 PPYP01298 95 aa8.7□□□□□ -1.02
VPS11-207ENST00000620429 WDR5BQ86VZ2 330 aa8.7□□□□□ -1.02
VPS11-207ENST00000620429 DTX1Q86Y01 620 aa8.7□□□□□ -1.02
VPS11-207ENST00000620429 MMD2Q8IY49 270 aa8.7□□□□□ -1.02
VPS11-207ENST00000620429 ZNF835Q9Y2P0 537 aa8.7□□□□□ -1.02
VPS11-207ENST00000620429 COL5A1P20908 1838 aaPredicted RBP8.7□□□□□ -1.02
VPS11-207ENST00000620429 H0Y8G0 127 aa8.69□□□□□ -1.02
VPS11-207ENST00000620429 ZNF207O43670 478 aaKnown RBP8.69□□□□□ -1.02
VPS11-207ENST00000620429 DUX1O43812 170 aa8.69□□□□□ -1.02
VPS11-207ENST00000620429 EGR1P18146 543 aa8.69□□□□□ -1.02
VPS11-207ENST00000620429 GPR183P32249 361 aa8.69□□□□□ -1.02
VPS11-207ENST00000620429 BRICD5Q6PL45 260 aa8.69□□□□□ -1.02
VPS11-207ENST00000620429 SPATA12Q7Z6I5 190 aa8.69□□□□□ -1.02
VPS11-207ENST00000620429 OR5D13Q8NGL4 314 aa8.69□□□□□ -1.02
VPS11-207ENST00000620429 OCC1Q8TAD7 63 aa8.69□□□□□ -1.02
VPS11-207ENST00000620429 PP6455Q8WZ26 134 aa8.69□□□□□ -1.02
VPS11-207ENST00000620429 NAT6Q93015 286 aa8.69□□□□□ -1.02
VPS11-207ENST00000620429 KLRF1Q9NZS2 232 aa8.69□□□□□ -1.02
VPS11-207ENST00000620429 JPT1Q9UK76 154 aa8.69□□□□□ -1.02
VPS11-207ENST00000620429 HLA-DQA1P01909 254 aa8.69□□□□□ -1.02
VPS11-207ENST00000620429 CX3CL1P78423 397 aa8.69□□□□□ -1.02
VPS11-207ENST00000620429 GABRA6Q16445 453 aa8.69□□□□□ -1.02
VPS11-207ENST00000620429 PLXDC1Q8IUK5 500 aa8.69□□□□□ -1.02
VPS11-207ENST00000620429 OR10AG1Q8NH19 301 aa8.69□□□□□ -1.02
VPS11-207ENST00000620429 CT55Q8WUE5 264 aa8.69□□□□□ -1.02
VPS11-207ENST00000620429 BLNKQ8WV28 456 aa8.69□□□□□ -1.02
VPS11-207ENST00000620429 TMEM70Q9BUB7 260 aa8.69□□□□□ -1.02
VPS11-207ENST00000620429 DUSP23Q9BVJ7 150 aa8.69□□□□□ -1.02
VPS11-207ENST00000620429 FER1L5A0AVI2 2057 aa8.69□□□□□ -1.02
VPS11-207ENST00000620429 PIGBOS1A0A0B4J2F0 54 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms