RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 MAS1LP35410 378 aa6.4□□□□□ -1.38
NEK3-209ENST00000618856 CHRNA7P36544 502 aa6.4□□□□□ -1.38
NEK3-209ENST00000618856 ETV6P41212 452 aa6.4□□□□□ -1.38
NEK3-209ENST00000618856 TAS2R19P59542 299 aa6.4□□□□□ -1.38
NEK3-209ENST00000618856 RND3P61587 244 aa6.4□□□□□ -1.38
NEK3-209ENST00000618856 OR2B11Q5JQS5 317 aa6.4□□□□□ -1.38
NEK3-209ENST00000618856 OR4A47Q6IF82 309 aa6.4□□□□□ -1.38
NEK3-209ENST00000618856 UNQ5815/PRO19632Q6UWF5 114 aa6.4□□□□□ -1.38
NEK3-209ENST00000618856 IDO2Q6ZQW0 420 aa6.4□□□□□ -1.38
NEK3-209ENST00000618856 CCDC190Q86UF4 302 aa6.4□□□□□ -1.38
NEK3-209ENST00000618856 TMEM17Q86X19 198 aa6.4□□□□□ -1.38
NEK3-209ENST00000618856 CMTM1Q8IZ96 169 aa6.4□□□□□ -1.38
NEK3-209ENST00000618856 SLC38A6Q8IZM9 456 aa6.4□□□□□ -1.38
NEK3-209ENST00000618856 VKORC1L1Q8N0U8 176 aa6.4□□□□□ -1.38
NEK3-209ENST00000618856 KLHL30-AS1Q8NEE0 82 aa6.4□□□□□ -1.38
NEK3-209ENST00000618856 OR4D10Q8NGI6 311 aa6.4□□□□□ -1.38
NEK3-209ENST00000618856 SRSF12Q8WXF0 261 aaKnown RBP6.4□□□□□ -1.38
NEK3-209ENST00000618856 DGCR14Q96DF8 476 aaKnown RBP6.4□□□□□ -1.38
NEK3-209ENST00000618856 ZNF486Q96H40 463 aaPredicted RBP6.4□□□□□ -1.38
NEK3-209ENST00000618856 AIFM2Q9BRQ8 373 aa6.4□□□□□ -1.38
NEK3-209ENST00000618856 C6orf62Q9GZU0 229 aaPredicted RBP6.4□□□□□ -1.38
NEK3-209ENST00000618856 GNB4Q9HAV0 340 aa6.4□□□□□ -1.38
NEK3-209ENST00000618856 SLC2A8Q9NY64 477 aa6.4□□□□□ -1.38
NEK3-209ENST00000618856 COMMD9Q9P000 198 aa6.4□□□□□ -1.38
NEK3-209ENST00000618856 VSIG4Q9Y279 399 aa6.4□□□□□ -1.38
NEK3-209ENST00000618856 V9GYH0 126 aa6.4□□□□□ -1.38
NEK3-209ENST00000618856 NOTCH3Q9UM47 2321 aa6.39□□□□□ -1.39
NEK3-209ENST00000618856 TRBV9A0A0B4J1U6 114 aa6.39□□□□□ -1.39
NEK3-209ENST00000618856 ANKRD20A5PA0PJZ0 165 aa6.39□□□□□ -1.39
NEK3-209ENST00000618856 FABP12A6NFH5 140 aa6.39□□□□□ -1.39
NEK3-209ENST00000618856 MSGN1A6NI15 193 aa6.39□□□□□ -1.39
NEK3-209ENST00000618856 E7EUB6 86 aa6.39□□□□□ -1.39
NEK3-209ENST00000618856 G3V4G9 280 aa6.39□□□□□ -1.39
NEK3-209ENST00000618856 CCL24O00175 119 aa6.39□□□□□ -1.39
NEK3-209ENST00000618856 DUS4LO95620 317 aaKnown RBP6.39□□□□□ -1.39
NEK3-209ENST00000618856 RLN1P04808 185 aa6.39□□□□□ -1.39
NEK3-209ENST00000618856 CRYGCP07315 174 aa6.39□□□□□ -1.39
NEK3-209ENST00000618856 NQO2P16083 231 aa6.39□□□□□ -1.39
NEK3-209ENST00000618856 TSPAN5P62079 268 aa6.39□□□□□ -1.39
NEK3-209ENST00000618856 MEF2DQ14814 521 aa6.39□□□□□ -1.39
NEK3-209ENST00000618856 ECSCRQ19T08 205 aa6.39□□□□□ -1.39
NEK3-209ENST00000618856 RNASE10Q5GAN6 216 aaKnown RBP6.39□□□□□ -1.39
NEK3-209ENST00000618856 FOXB2Q5VYV0 432 aa6.39□□□□□ -1.39
NEK3-209ENST00000618856 STEAP1BQ6NZ63 245 aa6.39□□□□□ -1.39
NEK3-209ENST00000618856 TTC9CQ8N5M4 171 aa6.39□□□□□ -1.39
NEK3-209ENST00000618856 POC5Q8NA72 575 aa6.39□□□□□ -1.39
NEK3-209ENST00000618856 ADAD2Q8NCV1 583 aaKnown RBP6.39□□□□□ -1.39
NEK3-209ENST00000618856 TERB2Q8NHR7 220 aa6.39□□□□□ -1.39
NEK3-209ENST00000618856 GRPEL2Q8TAA5 225 aa6.39□□□□□ -1.39
NEK3-209ENST00000618856 TRIM63Q969Q1 353 aa6.39□□□□□ -1.39
NEK3-209ENST00000618856 RCC1LQ96I51 464 aaKnown RBP6.39□□□□□ -1.39
NEK3-209ENST00000618856 DCUN1D5Q9BTE7 237 aa6.39□□□□□ -1.39
NEK3-209ENST00000618856 NDUFA13Q9P0J0 144 aa6.39□□□□□ -1.39
NEK3-209ENST00000618856 TRAV3A0A0B4J244 114 aa6.38□□□□□ -1.39
NEK3-209ENST00000618856 MARCH11A6NNE9 402 aa6.38□□□□□ -1.39
NEK3-209ENST00000618856 UPK2O00526 184 aa6.38□□□□□ -1.39
NEK3-209ENST00000618856 RBMXL2O75526 392 aaKnown RBP6.38□□□□□ -1.39
NEK3-209ENST00000618856 S1PR2O95136 353 aa6.38□□□□□ -1.39
NEK3-209ENST00000618856 CNIH1O95406 144 aa6.38□□□□□ -1.39
NEK3-209ENST00000618856 RAB3DO95716 219 aa6.38□□□□□ -1.39
NEK3-209ENST00000618856 IGKV1-39P01597 117 aa6.38□□□□□ -1.39
NEK3-209ENST00000618856 IGKV1D-39P04432 117 aa6.38□□□□□ -1.39
NEK3-209ENST00000618856 IFNA6P05013 189 aa6.38□□□□□ -1.39
NEK3-209ENST00000618856 LGALS1P09382 135 aaKnown RBP6.38□□□□□ -1.39
NEK3-209ENST00000618856 HLA-GP17693 338 aa6.38□□□□□ -1.39
NEK3-209ENST00000618856 GNB1P62873 340 aa6.38□□□□□ -1.39
NEK3-209ENST00000618856 RPL8P62917 257 aaKnown RBP6.38□□□□□ -1.39
NEK3-209ENST00000618856 ZNF45Q02386 682 aa6.38□□□□□ -1.39
NEK3-209ENST00000618856 EGFEM1PQ0D2K5 195 aa6.38□□□□□ -1.39
NEK3-209ENST00000618856 IL18Q14116 193 aa6.38□□□□□ -1.39
NEK3-209ENST00000618856 SURF2Q15527 256 aaPredicted RBP6.38□□□□□ -1.39
NEK3-209ENST00000618856 ZNF79Q15937 498 aa6.38□□□□□ -1.39
NEK3-209ENST00000618856 TNXAQ16473 311 aa6.38□□□□□ -1.39
NEK3-209ENST00000618856 OXLD1Q5BKU9 147 aa6.38□□□□□ -1.39
NEK3-209ENST00000618856 KHDC1LQ5JSQ8 128 aa6.38□□□□□ -1.39
NEK3-209ENST00000618856 TMEM65Q6PI78 240 aa6.38□□□□□ -1.39
NEK3-209ENST00000618856 TBC1D26Q86UD7 250 aa6.38□□□□□ -1.39
NEK3-209ENST00000618856 OR13C8Q8NGS7 320 aa6.38□□□□□ -1.39
NEK3-209ENST00000618856 OR51H1Q8NH63 302 aa6.38□□□□□ -1.39
NEK3-209ENST00000618856 SPIN2AQ99865 258 aa6.38□□□□□ -1.39
NEK3-209ENST00000618856 SPIN2BQ9BPZ2 258 aa6.38□□□□□ -1.39
NEK3-209ENST00000618856 SRSF8Q9BRL6 282 aaKnown RBP6.38□□□□□ -1.39
NEK3-209ENST00000618856 SLC2A9Q9NRM0 540 aa6.38□□□□□ -1.39
NEK3-209ENST00000618856 DPPA5A6NC42 116 aa6.37□□□□□ -1.39
NEK3-209ENST00000618856 NPIPB5A8MRT5 1133 aa6.37□□□□□ -1.39
NEK3-209ENST00000618856 NUDT19A8MXV4 375 aa6.37□□□□□ -1.39
NEK3-209ENST00000618856 H0Y980 276 aa6.37□□□□□ -1.39
NEK3-209ENST00000618856 MPPED1O15442 326 aa6.37□□□□□ -1.39
NEK3-209ENST00000618856 PF4P02776 101 aa6.37□□□□□ -1.39
NEK3-209ENST00000618856 CTSDP07339 412 aaPredicted RBP6.37□□□□□ -1.39
NEK3-209ENST00000618856 OR9G9P0C7N8 305 aa6.37□□□□□ -1.39
NEK3-209ENST00000618856 P0C879 139 aa6.37□□□□□ -1.39
NEK3-209ENST00000618856 AKAIN1P0CW23 69 aa6.37□□□□□ -1.39
NEK3-209ENST00000618856 IGLL1P15814 213 aa6.37□□□□□ -1.39
NEK3-209ENST00000618856 CD33P20138 364 aa6.37□□□□□ -1.39
NEK3-209ENST00000618856 ECI1P42126 302 aa6.37□□□□□ -1.39
NEK3-209ENST00000618856 LPAR6P43657 344 aa6.37□□□□□ -1.39
NEK3-209ENST00000618856 RPL27AP46776 148 aaKnown RBP6.37□□□□□ -1.39
NEK3-209ENST00000618856 OR2B8PP59922 312 aa6.37□□□□□ -1.39
NEK3-209ENST00000618856 KLF9Q13886 244 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms