RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 SOX8P57073 446 aa16.89■□□□□ 0.29
NEK3-208ENST00000618534 RAB4BP61018 213 aa16.89■□□□□ 0.29
NEK3-208ENST00000618534 RPL39P5Q59GN2 51 aa16.89■□□□□ 0.29
NEK3-208ENST00000618534 Q6ZT83 130 aa16.89■□□□□ 0.29
NEK3-208ENST00000618534 CDX2Q99626 313 aaPredicted RBP16.89■□□□□ 0.29
NEK3-208ENST00000618534 ARRDC1-AS1Q9H2J1 176 aa16.89■□□□□ 0.29
NEK3-208ENST00000618534 POLR3KQ9Y2Y1 108 aaPredicted RBP16.89■□□□□ 0.29
NEK3-208ENST00000618534 YTHDF2Q9Y5A9 579 aaKnown RBP16.89■□□□□ 0.29
NEK3-208ENST00000618534 GFRA3O60609 400 aa16.89■□□□□ 0.29
NEK3-208ENST00000618534 IGKV3-15P01624 115 aa16.89■□□□□ 0.29
NEK3-208ENST00000618534 COL8A2P25067 703 aa16.89■□□□□ 0.29
NEK3-208ENST00000618534 THBS3P49746 956 aa16.89■□□□□ 0.29
NEK3-208ENST00000618534 CNEP1R1Q8N9A8 125 aa16.89■□□□□ 0.29
NEK3-208ENST00000618534 OCC1Q8TAD7 63 aa16.89■□□□□ 0.29
NEK3-208ENST00000618534 LRRC29Q8WV35 223 aa16.89■□□□□ 0.29
NEK3-208ENST00000618534 SSMEM1Q8WWF3 244 aa16.89■□□□□ 0.29
NEK3-208ENST00000618534 CLCF1Q9UBD9 225 aa16.89■□□□□ 0.29
NEK3-208ENST00000618534 FAM90A9PA6NNJ1 464 aa16.88■□□□□ 0.29
NEK3-208ENST00000618534 ZNF883P0CG24 379 aa16.88■□□□□ 0.29
NEK3-208ENST00000618534 TIMP3P35625 211 aa16.88■□□□□ 0.29
NEK3-208ENST00000618534 FAM214BQ7L5A3 538 aa16.88■□□□□ 0.29
NEK3-208ENST00000618534 TRIB1Q96RU8 372 aa16.88■□□□□ 0.29
NEK3-208ENST00000618534 GRIFINA4D1Z8 144 aa16.88■□□□□ 0.29
NEK3-208ENST00000618534 C19orf67A6NJJ6 358 aa16.88■□□□□ 0.29
NEK3-208ENST00000618534 PRDX2P32119 198 aa16.88■□□□□ 0.29
NEK3-208ENST00000618534 MORN2Q502X0 79 aa16.88■□□□□ 0.29
NEK3-208ENST00000618534 C1orf159Q96HA4 380 aa16.88■□□□□ 0.29
NEK3-208ENST00000618534 TXNDC17Q9BRA2 123 aa16.88■□□□□ 0.29
NEK3-208ENST00000618534 CBLN4Q9NTU7 201 aa16.88■□□□□ 0.29
NEK3-208ENST00000618534 NAGKQ9UJ70 344 aa16.88■□□□□ 0.29
NEK3-208ENST00000618534 NBEAQ8NFP9 2946 aa16.88■□□□□ 0.29
NEK3-208ENST00000618534 TECTAO75443 2155 aa16.87■□□□□ 0.29
NEK3-208ENST00000618534 GPR179Q6PRD1 2367 aa16.87■□□□□ 0.29
NEK3-208ENST00000618534 ERVK-16P61578 105 aa16.87■□□□□ 0.29
NEK3-208ENST00000618534 RELBQ01201 579 aa16.87■□□□□ 0.29
NEK3-208ENST00000618534 ZNF718Q3SXZ3 478 aa16.87■□□□□ 0.29
NEK3-208ENST00000618534 TRAT1Q6PIZ9 186 aa16.87■□□□□ 0.29
NEK3-208ENST00000618534 OR10G8Q8NGN5 311 aa16.87■□□□□ 0.29
NEK3-208ENST00000618534 MS4A10Q96PG2 267 aa16.87■□□□□ 0.29
NEK3-208ENST00000618534 LNP1A1A4G5 178 aa16.87■□□□□ 0.29
NEK3-208ENST00000618534 CECR9P0C854 216 aa16.87■□□□□ 0.29
NEK3-208ENST00000618534 HOXC12P31275 282 aa16.87■□□□□ 0.29
NEK3-208ENST00000618534 TMPRSS3P57727 454 aa16.87■□□□□ 0.29
NEK3-208ENST00000618534 SPATA31B1PQ5VZV4 182 aa16.87■□□□□ 0.29
NEK3-208ENST00000618534 OR52E5Q8NH55 327 aa16.87■□□□□ 0.29
NEK3-208ENST00000618534 YPEL3P61236 119 aaPredicted RBP16.86■□□□□ 0.29
NEK3-208ENST00000618534 NUTF2P61970 127 aaKnown RBP16.86■□□□□ 0.29
NEK3-208ENST00000618534 FAM90A1Q86YD7 464 aa16.86■□□□□ 0.29
NEK3-208ENST00000618534 SNHG12Q9BXW3 62 aa16.86■□□□□ 0.29
NEK3-208ENST00000618534 TMEM140Q9NV12 185 aa16.86■□□□□ 0.29
NEK3-208ENST00000618534 IL6RP08887 468 aaPredicted RBP16.86■□□□□ 0.29
NEK3-208ENST00000618534 ZNF134P52741 427 aa16.86■□□□□ 0.29
NEK3-208ENST00000618534 C1orf194Q5T5A4 169 aa16.86■□□□□ 0.29
NEK3-208ENST00000618534 JPT1Q9UK76 154 aa16.86■□□□□ 0.29
NEK3-208ENST00000618534 TCF19Q9Y242 345 aa16.86■□□□□ 0.29
NEK3-208ENST00000618534 KIR2DL5BA0A0G2JN68 375 aa16.85■□□□□ 0.29
NEK3-208ENST00000618534 KIR2DL5BA0A0G2JPC4 375 aa16.85■□□□□ 0.29
NEK3-208ENST00000618534 TCAPO15273 167 aa16.85■□□□□ 0.29
NEK3-208ENST00000618534 CBLN1P23435 193 aa16.85■□□□□ 0.29
NEK3-208ENST00000618534 GCHFRP30047 84 aa16.85■□□□□ 0.29
NEK3-208ENST00000618534 HLA-DRB5Q30154 266 aa16.85■□□□□ 0.29
NEK3-208ENST00000618534 VWA1Q6PCB0 445 aa16.85■□□□□ 0.29
NEK3-208ENST00000618534 KIR2DL5AQ8N109 375 aa16.85■□□□□ 0.29
NEK3-208ENST00000618534 TMEM178AQ8NBL3 297 aa16.85■□□□□ 0.29
NEK3-208ENST00000618534 CMTM2Q8TAZ6 248 aa16.85■□□□□ 0.29
NEK3-208ENST00000618534 SEPSECSQ9HD40 501 aaKnown RBP16.85■□□□□ 0.29
NEK3-208ENST00000618534 DUSP13Q9UII6 198 aa16.85■□□□□ 0.29
NEK3-208ENST00000618534 LSM4Q9Y4Z0 139 aaKnown RBP16.85■□□□□ 0.29
NEK3-208ENST00000618534 IGKV1D-17A0A075B6S4 117 aa16.85■□□□□ 0.29
NEK3-208ENST00000618534 K7EN84 100 aa16.85■□□□□ 0.29
NEK3-208ENST00000618534 SLC17A3O00476 420 aa16.85■□□□□ 0.29
NEK3-208ENST00000618534 ERVFC1-1P60608 527 aa16.85■□□□□ 0.29
NEK3-208ENST00000618534 ATG101Q9BSB4 218 aa16.85■□□□□ 0.29
NEK3-208ENST00000618534 IFI27L2Q9H2X8 130 aa16.85■□□□□ 0.29
NEK3-208ENST00000618534 TP53TG3Q9ULZ0 132 aa16.85■□□□□ 0.29
NEK3-208ENST00000618534 RPL31P62899 125 aaKnown RBP16.84■□□□□ 0.29
NEK3-208ENST00000618534 ZNF90Q03938 601 aa16.84■□□□□ 0.29
NEK3-208ENST00000618534 EFNB3Q15768 340 aa16.84■□□□□ 0.29
NEK3-208ENST00000618534 ARSJQ5FYB0 599 aaPredicted RBP16.84■□□□□ 0.29
NEK3-208ENST00000618534 S1PR3Q99500 378 aa16.84■□□□□ 0.29
NEK3-208ENST00000618534 CD33P20138 364 aa16.84■□□□□ 0.29
NEK3-208ENST00000618534 OR10J1P30954 320 aa16.84■□□□□ 0.29
NEK3-208ENST00000618534 GUSBP1Q15486 140 aa16.84■□□□□ 0.29
NEK3-208ENST00000618534 UTF1Q5T230 341 aa16.84■□□□□ 0.29
NEK3-208ENST00000618534 C1orf229Q6ZS94 237 aaPredicted RBP16.84■□□□□ 0.29
NEK3-208ENST00000618534 NEU1Q99519 415 aa16.84■□□□□ 0.29
NEK3-208ENST00000618534 CHODLQ9H9P2 273 aa16.84■□□□□ 0.29
NEK3-208ENST00000618534 NPVFQ9HCQ7 196 aa16.84■□□□□ 0.29
NEK3-208ENST00000618534 YPEL1O60688 119 aa16.83■□□□□ 0.28
NEK3-208ENST00000618534 FOXH1O75593 365 aa16.83■□□□□ 0.28
NEK3-208ENST00000618534 LOXL3P58215 753 aa16.83■□□□□ 0.28
NEK3-208ENST00000618534 STPG3Q8N7X2 389 aa16.83■□□□□ 0.28
NEK3-208ENST00000618534 YPEL2Q96QA6 119 aa16.83■□□□□ 0.28
NEK3-208ENST00000618534 IGHV3OR15-7A0A075B7D8 119 aa16.82■□□□□ 0.28
NEK3-208ENST00000618534 ZNF705FA8MVS1 300 aaPredicted RBP16.82■□□□□ 0.28
NEK3-208ENST00000618534 ZNF705DP0CH99 300 aaPredicted RBP16.82■□□□□ 0.28
NEK3-208ENST00000618534 ZNF705BP0CI00 300 aaPredicted RBP16.82■□□□□ 0.28
NEK3-208ENST00000618534 KIR2DL2P43627 348 aaPredicted RBP16.82■□□□□ 0.28
NEK3-208ENST00000618534 LINC00310P59036 64 aa16.82■□□□□ 0.28
NEK3-208ENST00000618534 SELENOTP62341 195 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms