RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 GDF9O60383 454 aa16.04■□□□□ 0.16
SPAST-203ENST00000615843 GPX4P36969 197 aaPredicted RBP16.04■□□□□ 0.16
SPAST-203ENST00000615843 RSPO4Q2I0M5 234 aaPredicted RBP16.04■□□□□ 0.16
SPAST-203ENST00000615843 OTOFQ9HC10 1997 aa16.04■□□□□ 0.16
SPAST-203ENST00000615843 IGHV1-45A0A0A0MS14 117 aa16.04■□□□□ 0.16
SPAST-203ENST00000615843 C21orf140B9A014 251 aa16.04■□□□□ 0.16
SPAST-203ENST00000615843 CXCL1P09341 107 aa16.04■□□□□ 0.16
SPAST-203ENST00000615843 SPCS1Q9Y6A9 102 aa16.04■□□□□ 0.16
SPAST-203ENST00000615843 STRCP1A6NGW2 1772 aa16.03■□□□□ 0.16
SPAST-203ENST00000615843 PRR32B1ATL7 298 aa16.03■□□□□ 0.16
SPAST-203ENST00000615843 F2RL2O00254 374 aa16.03■□□□□ 0.16
SPAST-203ENST00000615843 NDUFS6O75380 124 aaKnown RBP16.03■□□□□ 0.16
SPAST-203ENST00000615843 FAM117AQ9C073 453 aa16.03■□□□□ 0.16
SPAST-203ENST00000615843 AICDAQ9GZX7 198 aa16.03■□□□□ 0.16
SPAST-203ENST00000615843 PTGDSP41222 190 aa16.03■□□□□ 0.16
SPAST-203ENST00000615843 TBR1Q16650 682 aa16.03■□□□□ 0.16
SPAST-203ENST00000615843 DCAF10Q5QP82 559 aa16.03■□□□□ 0.16
SPAST-203ENST00000615843 SRXN1Q9BYN0 137 aa16.03■□□□□ 0.16
SPAST-203ENST00000615843 MBNL2Q5VZF2 373 aaKnown RBP16.03■□□□□ 0.16
SPAST-203ENST00000615843 GOLT1AQ6ZVE7 132 aa16.03■□□□□ 0.16
SPAST-203ENST00000615843 TMEM74BQ9NUR3 256 aa16.03■□□□□ 0.16
SPAST-203ENST00000615843 FBLN5Q9UBX5 448 aa16.03■□□□□ 0.16
SPAST-203ENST00000615843 HTN1P15515 57 aa16.03■□□□□ 0.16
SPAST-203ENST00000615843 STARD6P59095 220 aa16.03■□□□□ 0.16
SPAST-203ENST00000615843 FAM90A27PA6NNH2 459 aa16.02■□□□□ 0.16
SPAST-203ENST00000615843 B4E171 279 aa16.02■□□□□ 0.16
SPAST-203ENST00000615843 ANOS1P23352 680 aa16.02■□□□□ 0.16
SPAST-203ENST00000615843 FBLN7Q53RD9 439 aa16.02■□□□□ 0.16
SPAST-203ENST00000615843 PCSK4Q6UW60 755 aa16.02■□□□□ 0.16
SPAST-203ENST00000615843 NPIPB3Q92617 1050 aa16.02■□□□□ 0.16
SPAST-203ENST00000615843 WFDC1Q9HC57 220 aa16.02■□□□□ 0.16
SPAST-203ENST00000615843 C5orf67F2Z3F1 127 aa16.02■□□□□ 0.16
SPAST-203ENST00000615843 AMBPP02760 352 aa16.02■□□□□ 0.16
SPAST-203ENST00000615843 ECSCRQ19T08 205 aa16.02■□□□□ 0.16
SPAST-203ENST00000615843 CYTL1Q9NRR1 136 aa16.02■□□□□ 0.16
SPAST-203ENST00000615843 MS4A5Q9H3V2 200 aa16.02■□□□□ 0.16
SPAST-203ENST00000615843 IDI2-AS1Q9NZ38 188 aa16.02■□□□□ 0.16
SPAST-203ENST00000615843 KLK10O43240 276 aa16.02■□□□□ 0.15
SPAST-203ENST00000615843 RBFOX2O43251 390 aaKnown RBP eCLIP16.02■□□□□ 0.15
SPAST-203ENST00000615843 FCGR2BP31994 310 aaPredicted RBP16.02■□□□□ 0.15
SPAST-203ENST00000615843 CCL8P80075 99 aa16.02■□□□□ 0.15
SPAST-203ENST00000615843 ADIPOQQ15848 244 aa16.02■□□□□ 0.15
SPAST-203ENST00000615843 C1QTNF9P0C862 333 aa16.02■□□□□ 0.15
SPAST-203ENST00000615843 NUTF2P61970 127 aaKnown RBP16.02■□□□□ 0.15
SPAST-203ENST00000615843 OR5P3Q8WZ94 311 aa16.02■□□□□ 0.15
SPAST-203ENST00000615843 LEAP2Q969E1 77 aa16.02■□□□□ 0.15
SPAST-203ENST00000615843 A6NNC1 897 aa16.01■□□□□ 0.15
SPAST-203ENST00000615843 SAPCD1Q5SSQ6 148 aa16.01■□□□□ 0.15
SPAST-203ENST00000615843 MRPL13Q9BYD1 178 aaKnown RBP16.01■□□□□ 0.15
SPAST-203ENST00000615843 TRBV24-1A0A075B6N3 115 aa16.01■□□□□ 0.15
SPAST-203ENST00000615843 EMP1P54849 157 aa16.01■□□□□ 0.15
SPAST-203ENST00000615843 ITLN1Q8WWA0 313 aa16.01■□□□□ 0.15
SPAST-203ENST00000615843 hCG_38984A0A1B0GV85 526 aa16.01■□□□□ 0.15
SPAST-203ENST00000615843 C1QTNF9BB2RNN3 333 aa16.01■□□□□ 0.15
SPAST-203ENST00000615843 PROB1E7EW31 1015 aa16.01■□□□□ 0.15
SPAST-203ENST00000615843 APOHP02749 345 aaPredicted RBP16.01■□□□□ 0.15
SPAST-203ENST00000615843 TFPI2P48307 235 aa16.01■□□□□ 0.15
SPAST-203ENST00000615843 ATP5IP56385 69 aaPredicted RBP16.01■□□□□ 0.15
SPAST-203ENST00000615843 A0A1B0GWB2 263 aa16■□□□□ 0.15
SPAST-203ENST00000615843 OR11H12B2RN74 326 aa16■□□□□ 0.15
SPAST-203ENST00000615843 SAMD13Q5VXD3 122 aa16■□□□□ 0.15
SPAST-203ENST00000615843 OR11H1Q8NG94 326 aa16■□□□□ 0.15
SPAST-203ENST00000615843 OR11H2Q8NH07 326 aa16■□□□□ 0.15
SPAST-203ENST00000615843 RABAC1Q9UI14 185 aa16■□□□□ 0.15
SPAST-203ENST00000615843 TRAV8-6A0A0B4J262 113 aa16■□□□□ 0.15
SPAST-203ENST00000615843 ATXN7O15265 892 aaPredicted RBP16■□□□□ 0.15
SPAST-203ENST00000615843 GFRA1P56159 465 aa16■□□□□ 0.15
SPAST-203ENST00000615843 SCARF2Q96GP6 870 aaPredicted RBP16■□□□□ 0.15
SPAST-203ENST00000615843 DERL1Q9BUN8 251 aa16■□□□□ 0.15
SPAST-203ENST00000615843 GPR6P46095 362 aaPredicted RBP16■□□□□ 0.15
SPAST-203ENST00000615843 PYY3Q5JQD4 70 aa16■□□□□ 0.15
SPAST-203ENST00000615843 IZUMO1RA6ND01 250 aa16■□□□□ 0.15
SPAST-203ENST00000615843 LGALS3P17931 250 aaKnown RBP16■□□□□ 0.15
SPAST-203ENST00000615843 FAM214BQ7L5A3 538 aa16■□□□□ 0.15
SPAST-203ENST00000615843 TTC9CQ8N5M4 171 aa16■□□□□ 0.15
SPAST-203ENST00000615843 KLK15Q9H2R5 256 aa16■□□□□ 0.15
SPAST-203ENST00000615843 TMEM242Q9NWH2 141 aa16■□□□□ 0.15
SPAST-203ENST00000615843 TDRD15B5MCY1 1934 aaKnown RBP15.99■□□□□ 0.15
SPAST-203ENST00000615843 LYPD3O95274 346 aa15.99■□□□□ 0.15
SPAST-203ENST00000615843 LRTM2Q8N967 370 aa15.99■□□□□ 0.15
SPAST-203ENST00000615843 IGHV3-48P01763 117 aa15.99■□□□□ 0.15
SPAST-203ENST00000615843 PRSS2P07478 247 aa15.99■□□□□ 0.15
SPAST-203ENST00000615843 IGFBP2P18065 325 aa15.99■□□□□ 0.15
SPAST-203ENST00000615843 LINC00305Q7Z4B0 112 aa15.99■□□□□ 0.15
SPAST-203ENST00000615843 C19orf67A6NJJ6 358 aa15.99■□□□□ 0.15
SPAST-203ENST00000615843 PSG9Q00887 426 aa15.99■□□□□ 0.15
SPAST-203ENST00000615843 HIST1H1AQ02539 215 aaPredicted RBP15.99■□□□□ 0.15
SPAST-203ENST00000615843 TM4SF20Q53R12 229 aa15.99■□□□□ 0.15
SPAST-203ENST00000615843 LURAP1LQ8IV03 231 aa15.99■□□□□ 0.15
SPAST-203ENST00000615843 TMEM160Q9NX00 188 aa15.99■□□□□ 0.15
SPAST-203ENST00000615843 REG1AP05451 166 aa15.98■□□□□ 0.15
SPAST-203ENST00000615843 PAQR4Q8N4S7 273 aaPredicted RBP15.98■□□□□ 0.15
SPAST-203ENST00000615843 C17orf98A8MV24 154 aa15.98■□□□□ 0.15
SPAST-203ENST00000615843 H3BUT2 72 aa15.98■□□□□ 0.15
SPAST-203ENST00000615843 PEX7O00628 323 aa15.98■□□□□ 0.15
SPAST-203ENST00000615843 SCGB1A1P11684 91 aa15.98■□□□□ 0.15
SPAST-203ENST00000615843 ACSF3Q4G176 576 aaPredicted RBP15.98■□□□□ 0.15
SPAST-203ENST00000615843 CCDC144NLQ6NUI1 221 aa15.98■□□□□ 0.15
SPAST-203ENST00000615843 EAF1Q96JC9 268 aaPredicted RBP15.98■□□□□ 0.15
SPAST-203ENST00000615843 C18orf15Q96N68 181 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms