RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 ZNF439Q8NDP4 499 aa15.71■□□□□ 0.11
MMP28-204ENST00000615136 CA5BP1Q8WTZ4 195 aa15.71■□□□□ 0.11
MMP28-204ENST00000615136 P2RX4Q99571 388 aa15.71■□□□□ 0.11
MMP28-204ENST00000615136 CTSZQ9UBR2 303 aa15.71■□□□□ 0.11
MMP28-204ENST00000615136 DOCK11Q5JSL3 2073 aa15.7■□□□□ 0.1
MMP28-204ENST00000615136 SAA2-SAA4A0A096LPE2 208 aa15.7■□□□□ 0.1
MMP28-204ENST00000615136 NKX6-3A6NJ46 265 aa15.7■□□□□ 0.1
MMP28-204ENST00000615136 FAM90A9PA6NNJ1 464 aa15.7■□□□□ 0.1
MMP28-204ENST00000615136 LYNX1G3V0Z9 82 aa15.7■□□□□ 0.1
MMP28-204ENST00000615136 IGKV1D-33P01593 117 aa15.7■□□□□ 0.1
MMP28-204ENST00000615136 IGKV1-33P01594 117 aa15.7■□□□□ 0.1
MMP28-204ENST00000615136 SAA2P0DJI9 122 aaPredicted RBP15.7■□□□□ 0.1
MMP28-204ENST00000615136 LYNX1P0DP58 116 aa15.7■□□□□ 0.1
MMP28-204ENST00000615136 LOXP28300 417 aaPredicted RBP15.7■□□□□ 0.1
MMP28-204ENST00000615136 FGF8P55075 233 aaPredicted RBP15.7■□□□□ 0.1
MMP28-204ENST00000615136 SNRPEP62304 92 aaKnown RBP15.7■□□□□ 0.1
MMP28-204ENST00000615136 C1QL4Q86Z23 238 aa15.7■□□□□ 0.1
MMP28-204ENST00000615136 OR10P1Q8NGE3 313 aa15.7■□□□□ 0.1
MMP28-204ENST00000615136 CORO2AQ92828 525 aa15.7■□□□□ 0.1
MMP28-204ENST00000615136 R3HDM4Q96D70 268 aa15.7■□□□□ 0.1
MMP28-204ENST00000615136 MS4A5Q9H3V2 200 aa15.7■□□□□ 0.1
MMP28-204ENST00000615136 IDI2-AS1Q9NZ38 188 aa15.7■□□□□ 0.1
MMP28-204ENST00000615136 HCFC1P51610 2035 aa15.7■□□□□ 0.1
MMP28-204ENST00000615136 UBE2CO00762 179 aa15.7■□□□□ 0.1
MMP28-204ENST00000615136 CCL3L1P16619 93 aa15.7■□□□□ 0.1
MMP28-204ENST00000615136 VKORC1L1Q8N0U8 176 aa15.7■□□□□ 0.1
MMP28-204ENST00000615136 RPP25LQ8N5L8 163 aaKnown RBP15.7■□□□□ 0.1
MMP28-204ENST00000615136 ZNF251Q9BRH9 671 aa15.7■□□□□ 0.1
MMP28-204ENST00000615136 LINC00574Q9H8X3 128 aa15.7■□□□□ 0.1
MMP28-204ENST00000615136 SIRT7Q9NRC8 400 aa15.7■□□□□ 0.1
MMP28-204ENST00000615136 VAX2Q9UIW0 290 aa15.7■□□□□ 0.1
MMP28-204ENST00000615136 PKD1L2Q7Z442 2459 aa15.7■□□□□ 0.1
MMP28-204ENST00000615136 ZNF729A6NN14 1252 aaPredicted RBP15.69■□□□□ 0.1
MMP28-204ENST00000615136 B9A039 149 aa15.69■□□□□ 0.1
MMP28-204ENST00000615136 IFNA1P01562 189 aa15.69■□□□□ 0.1
MMP28-204ENST00000615136 OR9G9P0C7N8 305 aa15.69■□□□□ 0.1
MMP28-204ENST00000615136 RAB11AP62491 216 aa15.69■□□□□ 0.1
MMP28-204ENST00000615136 SPINK9Q5DT21 86 aa15.69■□□□□ 0.1
MMP28-204ENST00000615136 ACSM6Q6P461 480 aa15.69■□□□□ 0.1
MMP28-204ENST00000615136 C1orf87Q8N0U7 546 aa15.69■□□□□ 0.1
MMP28-204ENST00000615136 CXorf65A6NEN9 183 aa15.68■□□□□ 0.1
MMP28-204ENST00000615136 B4DEV8 164 aa15.68■□□□□ 0.1
MMP28-204ENST00000615136 RBFOX2O43251 390 aaKnown RBP eCLIP15.68■□□□□ 0.1
MMP28-204ENST00000615136 HPRT1P00492 218 aa15.68■□□□□ 0.1
MMP28-204ENST00000615136 SFTPCP11686 197 aa15.68■□□□□ 0.1
MMP28-204ENST00000615136 MDKP21741 143 aaPredicted RBP15.68■□□□□ 0.1
MMP28-204ENST00000615136 GNB2P62879 340 aa15.68■□□□□ 0.1
MMP28-204ENST00000615136 TFF3Q07654 80 aa15.68■□□□□ 0.1
MMP28-204ENST00000615136 SSX9Q7RTT3 188 aa15.68■□□□□ 0.1
MMP28-204ENST00000615136 HIVEP3Q5T1R4 2406 aa15.68■□□□□ 0.1
MMP28-204ENST00000615136 CEBPZOSA8MTT3 80 aa15.68■□□□□ 0.1
MMP28-204ENST00000615136 ZNF727A8MUV8 499 aa15.68■□□□□ 0.1
MMP28-204ENST00000615136 LY86O95711 162 aa15.68■□□□□ 0.1
MMP28-204ENST00000615136 S100A6P06703 90 aa15.68■□□□□ 0.1
MMP28-204ENST00000615136 FGF7P21781 194 aa15.68■□□□□ 0.1
MMP28-204ENST00000615136 RPL31P62899 125 aaKnown RBP15.68■□□□□ 0.1
MMP28-204ENST00000615136 PNRC1Q12796 327 aaPredicted RBP15.68■□□□□ 0.1
MMP28-204ENST00000615136 LYG1Q8N1E2 194 aa15.68■□□□□ 0.1
MMP28-204ENST00000615136 MUC15Q8N387 334 aa15.68■□□□□ 0.1
MMP28-204ENST00000615136 DDB2Q92466 427 aa15.68■□□□□ 0.1
MMP28-204ENST00000615136 LINC00312Q9Y6C7 94 aa15.68■□□□□ 0.1
MMP28-204ENST00000615136 IGHV1-69-2A0A0G2JMI3 117 aa15.67■□□□□ 0.1
MMP28-204ENST00000615136 hADV38S2A0JD32 116 aa15.67■□□□□ 0.1
MMP28-204ENST00000615136 ITGB1BP1O14713 200 aa15.67■□□□□ 0.1
MMP28-204ENST00000615136 RBMXL2O75526 392 aaKnown RBP15.67■□□□□ 0.1
MMP28-204ENST00000615136 MBP02144 154 aa15.67■□□□□ 0.1
MMP28-204ENST00000615136 ZNF672Q499Z4 452 aaPredicted RBP15.67■□□□□ 0.1
MMP28-204ENST00000615136 TMEM200BQ69YZ2 307 aa15.67■□□□□ 0.1
MMP28-204ENST00000615136 C12orf57Q99622 126 aa15.67■□□□□ 0.1
MMP28-204ENST00000615136 QTRT1Q9BXR0 403 aaKnown RBP15.67■□□□□ 0.1
MMP28-204ENST00000615136 SLC39A9Q9NUM3 307 aa15.67■□□□□ 0.1
MMP28-204ENST00000615136 RPUSD1Q9UJJ7 312 aaKnown RBP15.67■□□□□ 0.1
MMP28-204ENST00000615136 CTXND1A0A1B0GTU2 59 aa15.67■□□□□ 0.1
MMP28-204ENST00000615136 C15orf62A8K5M9 175 aa15.67■□□□□ 0.1
MMP28-204ENST00000615136 IGHV2-5P01817 119 aa15.67■□□□□ 0.1
MMP28-204ENST00000615136 OR2B8PP59922 312 aa15.67■□□□□ 0.1
MMP28-204ENST00000615136 LHX4Q969G2 390 aa15.67■□□□□ 0.1
MMP28-204ENST00000615136 NPCDR1Q9BY65 106 aa15.67■□□□□ 0.1
MMP28-204ENST00000615136 METTL1Q9UBP6 276 aaKnown RBP15.67■□□□□ 0.1
MMP28-204ENST00000615136 COL8A2P25067 703 aa15.66■□□□□ 0.1
MMP28-204ENST00000615136 RAB7AP51149 207 aa15.66■□□□□ 0.1
MMP28-204ENST00000615136 ELOBQ15370 118 aa15.66■□□□□ 0.1
MMP28-204ENST00000615136 H1FXQ92522 213 aaKnown RBP15.66■□□□□ 0.1
MMP28-204ENST00000615136 GAB2Q9UQC2 676 aa15.66■□□□□ 0.1
MMP28-204ENST00000615136 TRAV3A0A0B4J244 114 aa15.65■□□□□ 0.1
MMP28-204ENST00000615136 DVL1O14640 695 aa15.65■□□□□ 0.1
MMP28-204ENST00000615136 EIF3GO75821 320 aaKnown RBP eCLIP15.65■□□□□ 0.1
MMP28-204ENST00000615136 MEOX2P50222 304 aa15.65■□□□□ 0.1
MMP28-204ENST00000615136 RPS16P62249 146 aaKnown RBP15.65■□□□□ 0.1
MMP28-204ENST00000615136 MRPS11P82912 194 aaKnown RBP15.65■□□□□ 0.1
MMP28-204ENST00000615136 PDLIM3Q53GG5 364 aaPredicted RBP15.65■□□□□ 0.1
MMP28-204ENST00000615136 ZNF383Q8NA42 475 aa15.65■□□□□ 0.1
MMP28-204ENST00000615136 Q8WTZ3 238 aa15.65■□□□□ 0.1
MMP28-204ENST00000615136 IFNA17P01571 189 aa15.65■□□□□ 0.1
MMP28-204ENST00000615136 KIR2DS2P43631 304 aa15.65■□□□□ 0.1
MMP28-204ENST00000615136 RBMS3Q6XE24 437 aaKnown RBP15.65■□□□□ 0.1
MMP28-204ENST00000615136 OR52E5Q8NH55 327 aa15.65■□□□□ 0.1
MMP28-204ENST00000615136 S1PR3Q99500 378 aa15.65■□□□□ 0.1
MMP28-204ENST00000615136 TMEM204Q9BSN7 226 aa15.65■□□□□ 0.1
MMP28-204ENST00000615136 SLC25A22Q9H936 323 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms