RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 CBLN4Q9NTU7 201 aa12.48□□□□□ -0.41
SNPH-203ENST00000614659 SPSB4Q96A44 273 aa12.48□□□□□ -0.41
SNPH-203ENST00000614659 MYOFQ9NZM1 2061 aa12.48□□□□□ -0.41
SNPH-203ENST00000614659 LY6G6FQ5SQ64 297 aa12.48□□□□□ -0.41
SNPH-203ENST00000614659 ZNF826PQ6ZT77 177 aa12.48□□□□□ -0.41
SNPH-203ENST00000614659 MYOZ3Q8TDC0 251 aa12.48□□□□□ -0.41
SNPH-203ENST00000614659 RARRES2Q99969 163 aa12.48□□□□□ -0.41
SNPH-203ENST00000614659 TUBA4BQ9H853 241 aa12.48□□□□□ -0.41
SNPH-203ENST00000614659 A0A1B0GV90 55 aa12.48□□□□□ -0.41
SNPH-203ENST00000614659 E9PQ18 207 aa12.48□□□□□ -0.41
SNPH-203ENST00000614659 H3BVH4 76 aa12.48□□□□□ -0.41
SNPH-203ENST00000614659 TM4SF5O14894 197 aa12.48□□□□□ -0.41
SNPH-203ENST00000614659 RFPL3SP0C7P2 107 aa12.48□□□□□ -0.41
SNPH-203ENST00000614659 ACP7Q6ZNF0 438 aa12.48□□□□□ -0.41
SNPH-203ENST00000614659 CLEC7AQ9BXN2 247 aa12.48□□□□□ -0.41
SNPH-203ENST00000614659 MRPL37Q9BZE1 423 aaKnown RBP12.48□□□□□ -0.41
SNPH-203ENST00000614659 MGAMO43451 1857 aa12.48□□□□□ -0.41
SNPH-203ENST00000614659 TIMP3P35625 211 aa12.47□□□□□ -0.41
SNPH-203ENST00000614659 CLDN18P56856 261 aa12.47□□□□□ -0.41
SNPH-203ENST00000614659 RTN4RL2Q86UN3 420 aa12.47□□□□□ -0.41
SNPH-203ENST00000614659 ST6GALNAC3Q8NDV1 305 aa12.47□□□□□ -0.41
SNPH-203ENST00000614659 H0YL77 283 aa12.47□□□□□ -0.41
SNPH-203ENST00000614659 C20orf204Q6ZNR8 217 aa12.47□□□□□ -0.41
SNPH-203ENST00000614659 TCF19Q9Y242 345 aa12.47□□□□□ -0.41
SNPH-203ENST00000614659 IQCF6A8MYZ5 107 aa12.47□□□□□ -0.41
SNPH-203ENST00000614659 FGF16O43320 207 aa12.47□□□□□ -0.41
SNPH-203ENST00000614659 ZG16O60844 167 aa12.47□□□□□ -0.41
SNPH-203ENST00000614659 CLPSP04118 112 aa12.47□□□□□ -0.41
SNPH-203ENST00000614659 SLC25A33Q9BSK2 321 aa12.47□□□□□ -0.41
SNPH-203ENST00000614659 SEMA5BQ9P283 1151 aa12.47□□□□□ -0.41
SNPH-203ENST00000614659 FABP2P12104 132 aa12.47□□□□□ -0.41
SNPH-203ENST00000614659 TRAV30A0A087WSZ9 112 aa12.47□□□□□ -0.41
SNPH-203ENST00000614659 MSGN1A6NI15 193 aa12.47□□□□□ -0.41
SNPH-203ENST00000614659 C8orf88P0DMB2 117 aa12.47□□□□□ -0.41
SNPH-203ENST00000614659 FAM27E3Q08E93 113 aa12.47□□□□□ -0.41
SNPH-203ENST00000614659 LY6DQ14210 128 aa12.47□□□□□ -0.41
SNPH-203ENST00000614659 LEMD1Q68G75 181 aa12.47□□□□□ -0.41
SNPH-203ENST00000614659 TPRX1Q8N7U7 411 aa12.47□□□□□ -0.41
SNPH-203ENST00000614659 LRTM2Q8N967 370 aa12.47□□□□□ -0.41
SNPH-203ENST00000614659 GPR61Q9BZJ8 451 aa12.47□□□□□ -0.41
SNPH-203ENST00000614659 LDLRAD4O15165 306 aa12.46□□□□□ -0.41
SNPH-203ENST00000614659 PLP1P60201 277 aa12.46□□□□□ -0.41
SNPH-203ENST00000614659 GLRX5Q86SX6 157 aa12.46□□□□□ -0.41
SNPH-203ENST00000614659 SNRNP40Q96DI7 357 aaKnown RBP12.46□□□□□ -0.41
SNPH-203ENST00000614659 TMEM106BQ9NUM4 274 aa12.46□□□□□ -0.41
SNPH-203ENST00000614659 SMAD7O15105 426 aaKnown RBP12.46□□□□□ -0.41
SNPH-203ENST00000614659 AMY1AP04745 511 aa12.46□□□□□ -0.41
SNPH-203ENST00000614659 LINC00869P0C866 280 aa12.46□□□□□ -0.41
SNPH-203ENST00000614659 CFPP27918 469 aa12.46□□□□□ -0.41
SNPH-203ENST00000614659 ZNF137PP52743 207 aa12.46□□□□□ -0.41
SNPH-203ENST00000614659 VWA8A3KMH1 1905 aa12.46□□□□□ -0.41
SNPH-203ENST00000614659 IBA57Q5T440 356 aaKnown RBP12.46□□□□□ -0.42
SNPH-203ENST00000614659 SCN5AQ14524 2016 aa12.46□□□□□ -0.42
SNPH-203ENST00000614659 MFAP2P55001 183 aa12.46□□□□□ -0.42
SNPH-203ENST00000614659 BSPH1Q075Z2 132 aa12.46□□□□□ -0.42
SNPH-203ENST00000614659 MIC13Q5XKP0 118 aa12.46□□□□□ -0.42
SNPH-203ENST00000614659 ARL6IP6Q8N6S5 226 aa12.46□□□□□ -0.42
SNPH-203ENST00000614659 RNF126Q9BV68 326 aa12.46□□□□□ -0.42
SNPH-203ENST00000614659 A0A1W2PPE3 182 aa12.45□□□□□ -0.42
SNPH-203ENST00000614659 KLF7O75840 302 aaPredicted RBP12.45□□□□□ -0.42
SNPH-203ENST00000614659 LYZL4Q96KX0 146 aa12.45□□□□□ -0.42
SNPH-203ENST00000614659 CLEC5AQ9NY25 188 aa12.45□□□□□ -0.42
SNPH-203ENST00000614659 TRBV6-7A0A0A0MS04 114 aa12.45□□□□□ -0.42
SNPH-203ENST00000614659 OR4C46A6NHA9 309 aa12.45□□□□□ -0.42
SNPH-203ENST00000614659 AREGP15514 252 aa12.45□□□□□ -0.42
SNPH-203ENST00000614659 NMUP48645 174 aa12.45□□□□□ -0.42
SNPH-203ENST00000614659 CEBPDP49716 269 aaPredicted RBP12.45□□□□□ -0.42
SNPH-203ENST00000614659 LOXL3P58215 753 aa12.45□□□□□ -0.42
SNPH-203ENST00000614659 TRAV9-1A0A075B6T8 112 aa12.45□□□□□ -0.42
SNPH-203ENST00000614659 MST1P26927 711 aa12.45□□□□□ -0.42
SNPH-203ENST00000614659 PAQR4Q8N4S7 273 aaPredicted RBP12.45□□□□□ -0.42
SNPH-203ENST00000614659 OR4C13Q8NGP0 309 aa12.45□□□□□ -0.42
SNPH-203ENST00000614659 MRPL18Q9H0U6 180 aaKnown RBP12.45□□□□□ -0.42
SNPH-203ENST00000614659 DNAJC4Q9NNZ3 241 aa12.45□□□□□ -0.42
SNPH-203ENST00000614659 LCN2P80188 198 aa12.45□□□□□ -0.42
SNPH-203ENST00000614659 SSBP3Q9BWW4 388 aaPredicted RBP12.45□□□□□ -0.42
SNPH-203ENST00000614659 TRGC1P0CF51 173 aa12.44□□□□□ -0.42
SNPH-203ENST00000614659 STPG3Q8N7X2 389 aa12.44□□□□□ -0.42
SNPH-203ENST00000614659 QTRT1Q9BXR0 403 aaKnown RBP12.44□□□□□ -0.42
SNPH-203ENST00000614659 YAE1D1Q9NRH1 226 aa12.44□□□□□ -0.42
SNPH-203ENST00000614659 AGAP20933 346 aa12.44□□□□□ -0.42
SNPH-203ENST00000614659 LHX2P50458 406 aa12.44□□□□□ -0.42
SNPH-203ENST00000614659 DLX1P56177 255 aa12.44□□□□□ -0.42
SNPH-203ENST00000614659 OR8I2Q8N0Y5 310 aa12.44□□□□□ -0.42
SNPH-203ENST00000614659 IGKV1-9A0A0C4DH69 117 aa12.44□□□□□ -0.42
SNPH-203ENST00000614659 CELA3AP09093 270 aa12.44□□□□□ -0.42
SNPH-203ENST00000614659 CRYGSP22914 178 aa12.44□□□□□ -0.42
SNPH-203ENST00000614659 FAM106AQ4KMX7 169 aa12.44□□□□□ -0.42
SNPH-203ENST00000614659 RBPMS2Q6ZRY4 209 aaKnown RBP12.44□□□□□ -0.42
SNPH-203ENST00000614659 BIVMQ86UB2 503 aa12.44□□□□□ -0.42
SNPH-203ENST00000614659 DCTN5Q9BTE1 182 aa12.44□□□□□ -0.42
SNPH-203ENST00000614659 PARLQ9H300 379 aa12.44□□□□□ -0.42
SNPH-203ENST00000614659 DOCK6Q96HP0 2047 aa12.44□□□□□ -0.42
SNPH-203ENST00000614659 CECR9P0C854 216 aa12.44□□□□□ -0.42
SNPH-203ENST00000614659 ARL14EPLP0DKL9 152 aa12.44□□□□□ -0.42
SNPH-203ENST00000614659 FAM166AQ6J272 317 aa12.44□□□□□ -0.42
SNPH-203ENST00000614659 ZNF600Q6ZNG1 722 aa12.44□□□□□ -0.42
SNPH-203ENST00000614659 DNM1P46Q6ZS02 220 aa12.44□□□□□ -0.42
SNPH-203ENST00000614659 HILPDAQ9Y5L2 63 aa12.44□□□□□ -0.42
SNPH-203ENST00000614659 CNTRLQ7Z7A1 2325 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms