RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 SCNM1Q9BWG6 230 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 LYZL6O75951 148 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 TMEM50AO95807 157 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 RPL31P62899 125 aaKnown RBP5.88□□□□□ -1.47
CLCN3-211ENST00000613795 DGAT2L7PQ6IED9 249 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 CCL17Q92583 94 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 PILRAQ9UKJ1 303 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 IGLV1-36A0A0B4J1U3 117 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 CEACAM21Q3KPI0 293 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 SPANXN1Q5VSR9 72 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 Q6AWC8 147 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 C9orf40Q8IXQ3 194 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 FAM19A2Q8N3H0 131 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 SCARF2Q96GP6 870 aaPredicted RBP5.88□□□□□ -1.47
CLCN3-211ENST00000613795 TTTY12Q9BZ98 90 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 NUP205Q92621 2012 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 A0A0G2JLM5 398 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 A0A1W2PQF6 199 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 PRR33A8MZF0 331 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 IGHV2-5P01817 119 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 PSG1P11464 419 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 MAGEA5P43359 124 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 SPINK14Q6IE38 97 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 AGMATQ9BSE5 352 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 NPCDR1Q9BY65 106 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 OSTCQ9NRP0 149 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 HILPDAQ9Y5L2 63 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 A8MWV9 139 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 TSPAN2O60636 221 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 IGHV4-34P06331 123 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 ZNF883P0CG24 379 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 TNXAQ16473 311 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 RNFT1Q5M7Z0 435 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 LINC01590Q5TEZ4 76 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 ZNF788Q6ZQV5 615 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 G6PC2Q9NQR9 355 aa5.88□□□□□ -1.47
CLCN3-211ENST00000613795 TRAV8-4A0A0B4J246 113 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 IGHV3-64DA0A0J9YX35 117 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 PGPA6NDG6 321 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 DLL1O00548 723 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 APOHP02749 345 aaPredicted RBP5.87□□□□□ -1.47
CLCN3-211ENST00000613795 CELA2BP08218 269 aaPredicted RBP5.87□□□□□ -1.47
CLCN3-211ENST00000613795 TDGF1P13385 188 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 PEBP1P30086 187 aaKnown RBP5.87□□□□□ -1.47
CLCN3-211ENST00000613795 TSPOP30536 169 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 MRAP2Q96G30 205 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 ZNF479Q96JC4 524 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 SPANXDQ9BXN6 97 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 GTSF1LQ9H1H1 148 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 H0YIZ8 118 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 FOXS1O43638 330 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 MYF5P13349 255 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 ADCYAP1P18509 176 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 C10orf91Q5T1B1 145 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 TM2D1Q9BX74 207 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 COL11A2P13942 1736 aaPredicted RBP5.87□□□□□ -1.47
CLCN3-211ENST00000613795 PPIAL4EA0A075B759 164 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 MGST3O14880 152 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 PPIAL4FP0DN26 164 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 CIRBPQ14011 172 aaKnown RBP5.87□□□□□ -1.47
CLCN3-211ENST00000613795 FAM71F2Q6NXP2 309 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 RASL11AQ6T310 242 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 C18orf12Q96KH6 178 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 PPIAL4AQ9Y536 164 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 A0A1W2PP11 408 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 LDLRAD4O15165 306 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 MGPP08493 103 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 NPSP0C0P6 89 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 UCP1P25874 307 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 GATAD1Q8WUU5 269 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 TMEM171Q8WVE6 324 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 SGK494Q96LW2 274 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 AMELYQ99218 206 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 ERVK11-1P61568 191 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 ZAR1Q86SH2 424 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 ATP6V0BQ99437 205 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 FBLN5Q9UBX5 448 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 DTX4Q9Y2E6 619 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 R4GN57 208 aa5.87□□□□□ -1.47
CLCN3-211ENST00000613795 KBTBD11-OT1A0A1B0GTJ5 212 aa5.86□□□□□ -1.47
CLCN3-211ENST00000613795 CEACAM18A8MTB9 384 aa5.86□□□□□ -1.47
CLCN3-211ENST00000613795 SCTP09683 121 aa5.86□□□□□ -1.47
CLCN3-211ENST00000613795 CCL3P10147 92 aa5.86□□□□□ -1.47
CLCN3-211ENST00000613795 RND2P52198 227 aa5.86□□□□□ -1.47
CLCN3-211ENST00000613795 IGLV3-21P80748 117 aaPredicted RBP5.86□□□□□ -1.47
CLCN3-211ENST00000613795 CXorf67Q86X51 503 aaPredicted RBP5.86□□□□□ -1.47
CLCN3-211ENST00000613795 ZNF525Q8N782 197 aa5.86□□□□□ -1.47
CLCN3-211ENST00000613795 SRSF12Q8WXF0 261 aaKnown RBP5.86□□□□□ -1.47
CLCN3-211ENST00000613795 NHP2Q9NX24 153 aaKnown RBP5.86□□□□□ -1.47
CLCN3-211ENST00000613795 TNS1Q9HBL0 1735 aaKnown RBP5.86□□□□□ -1.47
CLCN3-211ENST00000613795 TRAV8-6A0A0B4J262 113 aa5.86□□□□□ -1.47
CLCN3-211ENST00000613795 A0A1W2PS18 150 aa5.86□□□□□ -1.47
CLCN3-211ENST00000613795 C3orf80F5H4A9 247 aa5.86□□□□□ -1.47
CLCN3-211ENST00000613795 MST1P26927 711 aa5.86□□□□□ -1.47
CLCN3-211ENST00000613795 RAB9AP51151 201 aa5.86□□□□□ -1.47
CLCN3-211ENST00000613795 CCL20P78556 96 aa5.86□□□□□ -1.47
CLCN3-211ENST00000613795 MOGAT3Q86VF5 341 aa5.86□□□□□ -1.47
CLCN3-211ENST00000613795 DNASE2BQ8WZ79 361 aa5.86□□□□□ -1.47
CLCN3-211ENST00000613795 PRELID3AQ96N28 172 aa5.86□□□□□ -1.47
CLCN3-211ENST00000613795 NEU1Q99519 415 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms