RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 SMIM4Q8WVI0 70 aa14.03□□□□□ -0.16
SEMA3B-211ENST00000612509 MS4A10Q96PG2 267 aa14.03□□□□□ -0.16
SEMA3B-211ENST00000612509 TINAGL1Q9GZM7 467 aaPredicted RBP14.03□□□□□ -0.16
SEMA3B-211ENST00000612509 NXF2Q9GZY0 626 aaKnown RBP14.03□□□□□ -0.16
SEMA3B-211ENST00000612509 PGLYRP1O75594 196 aaPredicted RBP14.02□□□□□ -0.17
SEMA3B-211ENST00000612509 S1PR2O95136 353 aa14.02□□□□□ -0.17
SEMA3B-211ENST00000612509 HPRT1P00492 218 aa14.02□□□□□ -0.17
SEMA3B-211ENST00000612509 TRGV3P03979 118 aa14.02□□□□□ -0.17
SEMA3B-211ENST00000612509 CD3DP04234 171 aa14.02□□□□□ -0.17
SEMA3B-211ENST00000612509 LGALS1P09382 135 aaKnown RBP14.02□□□□□ -0.17
SEMA3B-211ENST00000612509 APELAP0DMC3 54 aa14.02□□□□□ -0.17
SEMA3B-211ENST00000612509 TAS2R19P59542 299 aa14.02□□□□□ -0.17
SEMA3B-211ENST00000612509 IL18Q14116 193 aa14.02□□□□□ -0.17
SEMA3B-211ENST00000612509 PHLDA2Q53GA4 152 aa14.02□□□□□ -0.17
SEMA3B-211ENST00000612509 OR5T1Q8NG75 326 aa14.02□□□□□ -0.17
SEMA3B-211ENST00000612509 MCFD2Q8NI22 146 aa14.02□□□□□ -0.17
SEMA3B-211ENST00000612509 CD300LFQ8TDQ1 290 aa14.02□□□□□ -0.17
SEMA3B-211ENST00000612509 ZNF355PQ9NSJ1 428 aa14.02□□□□□ -0.17
SEMA3B-211ENST00000612509 BET1LQ9NYM9 111 aa14.02□□□□□ -0.17
SEMA3B-211ENST00000612509 COMMD9Q9P000 198 aa14.02□□□□□ -0.17
SEMA3B-211ENST00000612509 RABL2AQ9UBK7 228 aaPredicted RBP14.02□□□□□ -0.17
SEMA3B-211ENST00000612509 RSL24D1Q9UHA3 163 aaKnown RBP14.02□□□□□ -0.17
SEMA3B-211ENST00000612509 RABL2BQ9UNT1 228 aa14.02□□□□□ -0.17
SEMA3B-211ENST00000612509 MSGN1A6NI15 193 aa14.01□□□□□ -0.17
SEMA3B-211ENST00000612509 MPPED1O15442 326 aa14.01□□□□□ -0.17
SEMA3B-211ENST00000612509 CD74P04233 296 aa14.01□□□□□ -0.17
SEMA3B-211ENST00000612509 IFNA6P05013 189 aa14.01□□□□□ -0.17
SEMA3B-211ENST00000612509 NQO2P16083 231 aa14.01□□□□□ -0.17
SEMA3B-211ENST00000612509 UCP3P55916 312 aa14.01□□□□□ -0.17
SEMA3B-211ENST00000612509 SSBP1Q04837 148 aaKnown RBP14.01□□□□□ -0.17
SEMA3B-211ENST00000612509 POU2AF1Q16633 256 aa14.01□□□□□ -0.17
SEMA3B-211ENST00000612509 OR4A47Q6IF82 309 aa14.01□□□□□ -0.17
SEMA3B-211ENST00000612509 LPCAT3Q6P1A2 487 aa14.01□□□□□ -0.17
SEMA3B-211ENST00000612509 SLC38A6Q8IZM9 456 aa14.01□□□□□ -0.17
SEMA3B-211ENST00000612509 ARRDC1Q8N5I2 433 aa14.01□□□□□ -0.17
SEMA3B-211ENST00000612509 TMEM229BQ8NBD8 167 aa14.01□□□□□ -0.17
SEMA3B-211ENST00000612509 AIFM2Q9BRQ8 373 aa14.01□□□□□ -0.17
SEMA3B-211ENST00000612509 MCRIP2Q9BUT9 160 aaKnown RBP14.01□□□□□ -0.17
SEMA3B-211ENST00000612509 RSRP1Q9BUV0 290 aa14.01□□□□□ -0.17
SEMA3B-211ENST00000612509 ALX4Q9H161 411 aaPredicted RBP14.01□□□□□ -0.17
SEMA3B-211ENST00000612509 PLEKHA2Q9HB19 425 aa14.01□□□□□ -0.17
SEMA3B-211ENST00000612509 CTDSPLO15194 276 aa14□□□□□ -0.17
SEMA3B-211ENST00000612509 IGHV3-11P01762 117 aa14□□□□□ -0.17
SEMA3B-211ENST00000612509 OR8U8P0C7N1 319 aa14□□□□□ -0.17
SEMA3B-211ENST00000612509 F2RP25116 425 aa14□□□□□ -0.17
SEMA3B-211ENST00000612509 ZNF616Q08AN1 781 aa14□□□□□ -0.17
SEMA3B-211ENST00000612509 PDLIM3Q53GG5 364 aaPredicted RBP14□□□□□ -0.17
SEMA3B-211ENST00000612509 FOXB2Q5VYV0 432 aa14□□□□□ -0.17
SEMA3B-211ENST00000612509 LHFPL1Q86WI0 220 aa14□□□□□ -0.17
SEMA3B-211ENST00000612509 ADAD2Q8NCV1 583 aaKnown RBP14□□□□□ -0.17
SEMA3B-211ENST00000612509 OR4D10Q8NGI6 311 aa14□□□□□ -0.17
SEMA3B-211ENST00000612509 OR1N2Q8NGR9 330 aa14□□□□□ -0.17
SEMA3B-211ENST00000612509 OR4A5Q8NH83 315 aa14□□□□□ -0.17
SEMA3B-211ENST00000612509 DGCR14Q96DF8 476 aaKnown RBP14□□□□□ -0.17
SEMA3B-211ENST00000612509 SPIN2AQ99865 258 aa14□□□□□ -0.17
SEMA3B-211ENST00000612509 SPIN2BQ9BPZ2 258 aa14□□□□□ -0.17
SEMA3B-211ENST00000612509 GPR61Q9BZJ8 451 aa14□□□□□ -0.17
SEMA3B-211ENST00000612509 COA4Q9NYJ1 87 aa14□□□□□ -0.17
SEMA3B-211ENST00000612509 ZNF701M0R085 212 aaPredicted RBP13.99□□□□□ -0.17
SEMA3B-211ENST00000612509 BRI3O95415 125 aa13.99□□□□□ -0.17
SEMA3B-211ENST00000612509 OR9G9P0C7N8 305 aa13.99□□□□□ -0.17
SEMA3B-211ENST00000612509 S100GP29377 79 aa13.99□□□□□ -0.17
SEMA3B-211ENST00000612509 MAS1LP35410 378 aa13.99□□□□□ -0.17
SEMA3B-211ENST00000612509 RPL27AP46776 148 aaKnown RBP13.99□□□□□ -0.17
SEMA3B-211ENST00000612509 RPL8P62917 257 aaKnown RBP13.99□□□□□ -0.17
SEMA3B-211ENST00000612509 DEFA5Q01523 94 aa13.99□□□□□ -0.17
SEMA3B-211ENST00000612509 HRASLSQ9HDD0 168 aa13.99□□□□□ -0.17
SEMA3B-211ENST00000612509 TMEM140Q9NV12 185 aa13.99□□□□□ -0.17
SEMA3B-211ENST00000612509 PRKDCP78527 4128 aaKnown RBP13.98□□□□□ -0.17
SEMA3B-211ENST00000612509 TEX22C9J3V5 150 aa13.98□□□□□ -0.17
SEMA3B-211ENST00000612509 RAB3DO95716 219 aa13.98□□□□□ -0.17
SEMA3B-211ENST00000612509 PRB2P02812 416 aaPredicted RBP13.98□□□□□ -0.17
SEMA3B-211ENST00000612509 PGAM2P15259 253 aa13.98□□□□□ -0.17
SEMA3B-211ENST00000612509 HLA-GP17693 338 aa13.98□□□□□ -0.17
SEMA3B-211ENST00000612509 TNFSF8P32971 234 aa13.98□□□□□ -0.17
SEMA3B-211ENST00000612509 PPP5CP53041 499 aa13.98□□□□□ -0.17
SEMA3B-211ENST00000612509 ERVK-16P61578 105 aa13.98□□□□□ -0.17
SEMA3B-211ENST00000612509 STEAP1BQ6NZ63 245 aa13.98□□□□□ -0.17
SEMA3B-211ENST00000612509 TBC1D26Q86UD7 250 aa13.98□□□□□ -0.17
SEMA3B-211ENST00000612509 DMBX1Q8NFW5 382 aa13.98□□□□□ -0.17
SEMA3B-211ENST00000612509 SLC2A9Q9NRM0 540 aa13.98□□□□□ -0.17
SEMA3B-211ENST00000612509 IGHV4OR15-8A0A075B7B6 117 aa13.97□□□□□ -0.17
SEMA3B-211ENST00000612509 A0A087WW49 117 aa13.97□□□□□ -0.17
SEMA3B-211ENST00000612509 C13orf42A0A1B0GVH6 325 aa13.97□□□□□ -0.17
SEMA3B-211ENST00000612509 A0A1B0GW64 132 aa13.97□□□□□ -0.17
SEMA3B-211ENST00000612509 HMX3A6NHT5 357 aa13.97□□□□□ -0.17
SEMA3B-211ENST00000612509 MARCH11A6NNE9 402 aa13.97□□□□□ -0.17
SEMA3B-211ENST00000612509 LINC01619G3V211 115 aa13.97□□□□□ -0.17
SEMA3B-211ENST00000612509 ZNF735P0CB33 412 aa13.97□□□□□ -0.17
SEMA3B-211ENST00000612509 MYOD1P15172 320 aa13.97□□□□□ -0.17
SEMA3B-211ENST00000612509 LPAR6P43657 344 aa13.97□□□□□ -0.17
SEMA3B-211ENST00000612509 ZNF585BQ52M93 769 aa13.97□□□□□ -0.17
SEMA3B-211ENST00000612509 FAAP20Q6NZ36 180 aa13.97□□□□□ -0.17
SEMA3B-211ENST00000612509 DPF1Q92782 380 aa13.97□□□□□ -0.17
SEMA3B-211ENST00000612509 FYTTD1Q96QD9 318 aaKnown RBP13.97□□□□□ -0.17
SEMA3B-211ENST00000612509 TRAV3A0A0B4J244 114 aa13.96□□□□□ -0.17
SEMA3B-211ENST00000612509 A0A0G2JLM5 398 aa13.96□□□□□ -0.17
SEMA3B-211ENST00000612509 E7EUB6 86 aa13.96□□□□□ -0.17
SEMA3B-211ENST00000612509 UPK2O00526 184 aa13.96□□□□□ -0.17
SEMA3B-211ENST00000612509 GSTZ1O43708 216 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms