RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 PYGO2Q9BRQ0 406 aa16.97■□□□□ 0.31
SSBP3-216ENST00000610401 NAGKQ9UJ70 344 aa16.97■□□□□ 0.31
SSBP3-216ENST00000610401 SP1P08047 785 aa16.97■□□□□ 0.31
SSBP3-216ENST00000610401 OR10J4P0C629 311 aa16.97■□□□□ 0.31
SSBP3-216ENST00000610401 ERVK11-1P61568 191 aa16.97■□□□□ 0.31
SSBP3-216ENST00000610401 OR4P4Q8NGL7 312 aa16.97■□□□□ 0.31
SSBP3-216ENST00000610401 CMTM2Q8TAZ6 248 aa16.97■□□□□ 0.31
SSBP3-216ENST00000610401 YTHDF2Q9Y5A9 579 aaKnown RBP16.97■□□□□ 0.31
SSBP3-216ENST00000610401 IGHEP01854 428 aa16.97■□□□□ 0.31
SSBP3-216ENST00000610401 TFPI2P48307 235 aa16.97■□□□□ 0.31
SSBP3-216ENST00000610401 HES3Q5TGS1 186 aa16.97■□□□□ 0.31
SSBP3-216ENST00000610401 FAM216AQ8WUB2 273 aa16.97■□□□□ 0.31
SSBP3-216ENST00000610401 AGMATQ9BSE5 352 aa16.97■□□□□ 0.31
SSBP3-216ENST00000610401 PARD6AQ9NPB6 346 aa16.97■□□□□ 0.31
SSBP3-216ENST00000610401 TRGV5A0A0B4J1U4 118 aa16.96■□□□□ 0.31
SSBP3-216ENST00000610401 OOEPA6NGQ2 149 aa16.96■□□□□ 0.31
SSBP3-216ENST00000610401 KRTDAPP60985 99 aa16.96■□□□□ 0.31
SSBP3-216ENST00000610401 RPL31P62899 125 aaKnown RBP16.96■□□□□ 0.31
SSBP3-216ENST00000610401 SRSF6Q13247 344 aaKnown RBP16.96■□□□□ 0.31
SSBP3-216ENST00000610401 DOLPP1Q86YN1 238 aa16.96■□□□□ 0.31
SSBP3-216ENST00000610401 RELNP78509 3460 aa16.96■□□□□ 0.31
SSBP3-216ENST00000610401 PCNX2A6NKB5 2137 aa16.96■□□□□ 0.31
SSBP3-216ENST00000610401 PROP1O75360 226 aa16.96■□□□□ 0.31
SSBP3-216ENST00000610401 GCGP01275 180 aa16.96■□□□□ 0.31
SSBP3-216ENST00000610401 ZNF146Q15072 292 aa16.96■□□□□ 0.31
SSBP3-216ENST00000610401 NRN1LQ496H8 165 aa16.96■□□□□ 0.31
SSBP3-216ENST00000610401 LRRC29Q8WV35 223 aa16.96■□□□□ 0.31
SSBP3-216ENST00000610401 ACY3Q96HD9 319 aa16.96■□□□□ 0.31
SSBP3-216ENST00000610401 SERTAD4Q9NUC0 356 aa16.96■□□□□ 0.31
SSBP3-216ENST00000610401 FCN1O00602 326 aa16.95■□□□□ 0.3
SSBP3-216ENST00000610401 GGCTO75223 188 aaKnown RBP16.95■□□□□ 0.3
SSBP3-216ENST00000610401 SERF1AO75920 110 aa16.95■□□□□ 0.3
SSBP3-216ENST00000610401 CYC1P08574 325 aa16.95■□□□□ 0.3
SSBP3-216ENST00000610401 TIMP3P35625 211 aa16.95■□□□□ 0.3
SSBP3-216ENST00000610401 VWA1Q6PCB0 445 aa16.95■□□□□ 0.3
SSBP3-216ENST00000610401 TREML4Q6UXN2 200 aa16.95■□□□□ 0.3
SSBP3-216ENST00000610401 LHFPL4Q7Z7J7 247 aa16.95■□□□□ 0.3
SSBP3-216ENST00000610401 TGIF2LYQ8IUE0 185 aa16.95■□□□□ 0.3
SSBP3-216ENST00000610401 CISD2Q8N5K1 135 aaKnown RBP16.95■□□□□ 0.3
SSBP3-216ENST00000610401 TRAV34A0A0B4J273 112 aa16.95■□□□□ 0.3
SSBP3-216ENST00000610401 GNG10P50151 68 aa16.95■□□□□ 0.3
SSBP3-216ENST00000610401 ERVFC1-1P60608 527 aa16.95■□□□□ 0.3
SSBP3-216ENST00000610401 MLANAQ16655 118 aa16.95■□□□□ 0.3
SSBP3-216ENST00000610401 SPRNQ5BIV9 151 aa16.95■□□□□ 0.3
SSBP3-216ENST00000610401 MGST2Q99735 147 aa16.95■□□□□ 0.3
SSBP3-216ENST00000610401 WIPI2Q9Y4P8 454 aa16.95■□□□□ 0.3
SSBP3-216ENST00000610401 AHRRA9YTQ3 701 aa16.94■□□□□ 0.3
SSBP3-216ENST00000610401 CA1P00915 261 aaPredicted RBP16.94■□□□□ 0.3
SSBP3-216ENST00000610401 CGAP01215 116 aa16.94■□□□□ 0.3
SSBP3-216ENST00000610401 HOXC12P31275 282 aa16.94■□□□□ 0.3
SSBP3-216ENST00000610401 NUTF2P61970 127 aaKnown RBP16.94■□□□□ 0.3
SSBP3-216ENST00000610401 OR8I2Q8N0Y5 310 aa16.94■□□□□ 0.3
SSBP3-216ENST00000610401 ATOH7Q8N100 152 aa16.94■□□□□ 0.3
SSBP3-216ENST00000610401 Q8TCH9 128 aa16.94■□□□□ 0.3
SSBP3-216ENST00000610401 NOL4LQ96MY1 436 aaPredicted RBP16.94■□□□□ 0.3
SSBP3-216ENST00000610401 C2orf88Q9BSF0 95 aa16.94■□□□□ 0.3
SSBP3-216ENST00000610401 GP6Q9HCN6 339 aa16.94■□□□□ 0.3
SSBP3-216ENST00000610401 MKRN2OSH3BPM6 223 aa16.94■□□□□ 0.3
SSBP3-216ENST00000610401 OR10G8Q8NGN5 311 aa16.94■□□□□ 0.3
SSBP3-216ENST00000610401 IER2Q9BTL4 223 aa16.94■□□□□ 0.3
SSBP3-216ENST00000610401 LRFN3Q9BTN0 628 aa16.94■□□□□ 0.3
SSBP3-216ENST00000610401 MRPL37Q9BZE1 423 aaKnown RBP16.94■□□□□ 0.3
SSBP3-216ENST00000610401 STRADBQ9C0K7 418 aa16.94■□□□□ 0.3
SSBP3-216ENST00000610401 RNASE7Q9H1E1 156 aaKnown RBP16.94■□□□□ 0.3
SSBP3-216ENST00000610401 PMCHP20382 165 aa16.93■□□□□ 0.3
SSBP3-216ENST00000610401 ZNF134P52741 427 aa16.93■□□□□ 0.3
SSBP3-216ENST00000610401 Q8IYB0 196 aa16.93■□□□□ 0.3
SSBP3-216ENST00000610401 RNASEH2CQ8TDP1 164 aaKnown RBP16.93■□□□□ 0.3
SSBP3-216ENST00000610401 ELOVL5Q9NYP7 299 aa16.93■□□□□ 0.3
SSBP3-216ENST00000610401 TIMM9Q9Y5J7 89 aa16.93■□□□□ 0.3
SSBP3-216ENST00000610401 TNRC6AQ8NDV7 1962 aaKnown RBP16.93■□□□□ 0.3
SSBP3-216ENST00000610401 SNURFLB1AK76 121 aa16.93■□□□□ 0.3
SSBP3-216ENST00000610401 FAM90A26D6RGX4 464 aa16.93■□□□□ 0.3
SSBP3-216ENST00000610401 MGST1P10620 155 aaKnown RBP16.93■□□□□ 0.3
SSBP3-216ENST00000610401 ATP6V1FQ16864 119 aa16.93■□□□□ 0.3
SSBP3-216ENST00000610401 KRTCAP3Q53RY4 240 aa16.93■□□□□ 0.3
SSBP3-216ENST00000610401 DUX4L9Q6RFH8 374 aaPredicted RBP16.93■□□□□ 0.3
SSBP3-216ENST00000610401 WDR82Q6UXN9 313 aa16.93■□□□□ 0.3
SSBP3-216ENST00000610401 HSD17B10Q99714 261 aaKnown RBP16.93■□□□□ 0.3
SSBP3-216ENST00000610401 HIPK2Q9H2X6 1198 aa16.93■□□□□ 0.3
SSBP3-216ENST00000610401 SPINT2O43291 252 aa16.93■□□□□ 0.3
SSBP3-216ENST00000610401 CRISP2P16562 243 aa16.93■□□□□ 0.3
SSBP3-216ENST00000610401 SPCS3P61009 180 aa16.93■□□□□ 0.3
SSBP3-216ENST00000610401 TMEM164Q5U3C3 297 aa16.93■□□□□ 0.3
SSBP3-216ENST00000610401 MRPL54Q6P161 138 aaKnown RBP16.93■□□□□ 0.3
SSBP3-216ENST00000610401 ACP7Q6ZNF0 438 aa16.93■□□□□ 0.3
SSBP3-216ENST00000610401 C11orf53Q8IXP5 236 aa16.93■□□□□ 0.3
SSBP3-216ENST00000610401 CD177Q8N6Q3 437 aa16.93■□□□□ 0.3
SSBP3-216ENST00000610401 SGK494Q96LW2 274 aa16.93■□□□□ 0.3
SSBP3-216ENST00000610401 MRPL18Q9H0U6 180 aaKnown RBP16.93■□□□□ 0.3
SSBP3-216ENST00000610401 NPIPB11E5RHQ5 1161 aa16.92■□□□□ 0.3
SSBP3-216ENST00000610401 KLRC4-KLRK1H3BQV0 150 aa16.92■□□□□ 0.3
SSBP3-216ENST00000610401 HPRT1P00492 218 aa16.92■□□□□ 0.3
SSBP3-216ENST00000610401 SRP14P37108 136 aaKnown RBP16.92■□□□□ 0.3
SSBP3-216ENST00000610401 CCL11P51671 97 aa16.92■□□□□ 0.3
SSBP3-216ENST00000610401 Q6ZWC4 215 aa16.92■□□□□ 0.3
SSBP3-216ENST00000610401 CIB3Q96Q77 187 aaPredicted RBP16.92■□□□□ 0.3
SSBP3-216ENST00000610401 K7EN84 100 aa16.92■□□□□ 0.3
SSBP3-216ENST00000610401 TNFSF15O95150 251 aa16.92■□□□□ 0.3
SSBP3-216ENST00000610401 SOX8P57073 446 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms