RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 SIKE1Q9BRV8 207 aa0.25□□□□□ -2.37
HDDC2-207ENST00000608532 NSRP1Q9H0G5 558 aaKnown RBP0.25□□□□□ -2.37
HDDC2-207ENST00000608532 OR5AC2Q9NZP5 309 aa0.25□□□□□ -2.37
HDDC2-207ENST00000608532 CFAP45Q9UL16 551 aa0.25□□□□□ -2.37
HDDC2-207ENST00000608532 ALPK2Q86TB3 2170 aa0.25□□□□□ -2.37
HDDC2-207ENST00000608532 FSIP2Q5CZC0 6907 aa0.24□□□□□ -2.37
HDDC2-207ENST00000608532 ATP6V1G2O95670 118 aa0.24□□□□□ -2.37
HDDC2-207ENST00000608532 MSMBP08118 114 aa0.24□□□□□ -2.37
HDDC2-207ENST00000608532 CCL5P13501 91 aa0.24□□□□□ -2.37
HDDC2-207ENST00000608532 MIPP30301 263 aa0.24□□□□□ -2.37
HDDC2-207ENST00000608532 RUNX1Q01196 453 aa0.24□□□□□ -2.37
HDDC2-207ENST00000608532 C4orf26Q17RF5 130 aa0.24□□□□□ -2.37
HDDC2-207ENST00000608532 OR5AK3PQ8NH89 298 aa0.24□□□□□ -2.37
HDDC2-207ENST00000608532 AQP3Q92482 292 aa0.24□□□□□ -2.37
HDDC2-207ENST00000608532 RBP7Q96R05 134 aa0.24□□□□□ -2.37
HDDC2-207ENST00000608532 PTPRSQ13332 1948 aa0.24□□□□□ -2.37
HDDC2-207ENST00000608532 DICER1Q9UPY3 1922 aaKnown RBP0.24□□□□□ -2.37
HDDC2-207ENST00000608532 A0A087WX48 190 aa0.23□□□□□ -2.37
HDDC2-207ENST00000608532 C5orf49A4QMS7 147 aa0.23□□□□□ -2.37
HDDC2-207ENST00000608532 GOLGA6L10A6NI86 522 aa0.23□□□□□ -2.37
HDDC2-207ENST00000608532 COX7A2LO14548 114 aa0.23□□□□□ -2.37
HDDC2-207ENST00000608532 PMP2P02689 132 aa0.23□□□□□ -2.37
HDDC2-207ENST00000608532 HIST1H1CP16403 213 aaKnown RBP0.23□□□□□ -2.37
HDDC2-207ENST00000608532 HLA-DRB3P79483 266 aa0.23□□□□□ -2.37
HDDC2-207ENST00000608532 JOSD1Q15040 202 aaPredicted RBP0.23□□□□□ -2.37
HDDC2-207ENST00000608532 ZNHIT3Q15649 155 aaPredicted RBP0.23□□□□□ -2.37
HDDC2-207ENST00000608532 FAM45BPQ6NSW5 357 aa0.23□□□□□ -2.37
HDDC2-207ENST00000608532 SPATA8Q6RVD6 105 aa0.23□□□□□ -2.37
HDDC2-207ENST00000608532 C17orf78Q8N4C9 275 aa0.23□□□□□ -2.37
HDDC2-207ENST00000608532 OR4C6Q8NH72 309 aa0.23□□□□□ -2.37
HDDC2-207ENST00000608532 ASB13Q8WXK3 278 aa0.23□□□□□ -2.37
HDDC2-207ENST00000608532 YIPF3Q9GZM5 350 aa0.23□□□□□ -2.37
HDDC2-207ENST00000608532 MED12LQ86YW9 2145 aa0.23□□□□□ -2.37
HDDC2-207ENST00000608532 TRBV10-2A0A0K0K1G8 114 aa0.22□□□□□ -2.37
HDDC2-207ENST00000608532 IRGMA1A4Y4 181 aa0.22□□□□□ -2.37
HDDC2-207ENST00000608532 NSA2O95478 260 aaKnown RBP0.22□□□□□ -2.37
HDDC2-207ENST00000608532 HLA-DRB5Q30154 266 aa0.22□□□□□ -2.37
HDDC2-207ENST00000608532 ERMAPQ96PL5 475 aaPredicted RBP0.22□□□□□ -2.37
HDDC2-207ENST00000608532 CCL13Q99616 98 aa0.22□□□□□ -2.37
HDDC2-207ENST00000608532 TIPINQ9BVW5 301 aa0.22□□□□□ -2.37
HDDC2-207ENST00000608532 AGPAT3Q9NRZ7 376 aa0.22□□□□□ -2.37
HDDC2-207ENST00000608532 BAIAP2Q9UQB8 552 aa0.22□□□□□ -2.37
HDDC2-207ENST00000608532 GREB1Q4ZG55 1949 aa0.21□□□□□ -2.38
HDDC2-207ENST00000608532 LOC100506127A0A0U1RQW1 187 aa0.21□□□□□ -2.38
HDDC2-207ENST00000608532 A0A1B0GW54 56 aa0.21□□□□□ -2.38
HDDC2-207ENST00000608532 C21orf140B9A014 251 aa0.21□□□□□ -2.38
HDDC2-207ENST00000608532 K7ERQ8 282 aa0.21□□□□□ -2.38
HDDC2-207ENST00000608532 BRI3O95415 125 aa0.21□□□□□ -2.38
HDDC2-207ENST00000608532 RD3LP0DJH9 198 aa0.21□□□□□ -2.38
HDDC2-207ENST00000608532 KDELR2P33947 212 aa0.21□□□□□ -2.38
HDDC2-207ENST00000608532 ZNF345Q14585 488 aa0.21□□□□□ -2.38
HDDC2-207ENST00000608532 EBPQ15125 230 aaKnown RBP0.21□□□□□ -2.38
HDDC2-207ENST00000608532 Q3ZCU0 254 aa0.21□□□□□ -2.38
HDDC2-207ENST00000608532 C10orf67Q8IYJ2 551 aa0.21□□□□□ -2.38
HDDC2-207ENST00000608532 RIBC1Q8N443 379 aaPredicted RBP0.21□□□□□ -2.38
HDDC2-207ENST00000608532 TBC1D19Q8N5T2 526 aa0.21□□□□□ -2.38
HDDC2-207ENST00000608532 SGMS2Q8NHU3 365 aa0.21□□□□□ -2.38
HDDC2-207ENST00000608532 GNPNAT1Q96EK6 184 aaPredicted RBP0.21□□□□□ -2.38
HDDC2-207ENST00000608532 ANKRD36BP1Q96IX9 119 aa0.21□□□□□ -2.38
HDDC2-207ENST00000608532 HRASLSQ9HDD0 168 aa0.21□□□□□ -2.38
HDDC2-207ENST00000608532 ZFP30Q9Y2G7 519 aa0.21□□□□□ -2.38
HDDC2-207ENST00000608532 LAMA4Q16363 1823 aa0.21□□□□□ -2.38
HDDC2-207ENST00000608532 A0A1W2PP64 1363 aa0.2□□□□□ -2.38
HDDC2-207ENST00000608532 IGKV1D-42A0A075B6H8 117 aa0.2□□□□□ -2.38
HDDC2-207ENST00000608532 CCRL2O00421 344 aa0.2□□□□□ -2.38
HDDC2-207ENST00000608532 LEPROTO15243 131 aa0.2□□□□□ -2.38
HDDC2-207ENST00000608532 SLC22A1O15245 554 aa0.2□□□□□ -2.38
HDDC2-207ENST00000608532 STX10O60499 249 aa0.2□□□□□ -2.38
HDDC2-207ENST00000608532 NEMFO60524 1076 aa0.2□□□□□ -2.38
HDDC2-207ENST00000608532 IVLP07476 585 aa0.2□□□□□ -2.38
HDDC2-207ENST00000608532 CD40LGP29965 261 aa0.2□□□□□ -2.38
HDDC2-207ENST00000608532 SLC37A2Q8TED4 501 aa0.2□□□□□ -2.38
HDDC2-207ENST00000608532 XAGE1AQ9HD64 81 aa0.2□□□□□ -2.38
HDDC2-207ENST00000608532 C1orf109Q9NX04 203 aa0.2□□□□□ -2.38
HDDC2-207ENST00000608532 PRELID1Q9Y255 219 aa0.2□□□□□ -2.38
HDDC2-207ENST00000608532 STRCQ7RTU9 1775 aa0.19□□□□□ -2.38
HDDC2-207ENST00000608532 NAV2Q8IVL1 2488 aa0.19□□□□□ -2.38
HDDC2-207ENST00000608532 TEX50A0A1B0GTY4 177 aa0.19□□□□□ -2.38
HDDC2-207ENST00000608532 SHBGP04278 402 aa0.19□□□□□ -2.38
HDDC2-207ENST00000608532 IL6P05231 212 aa0.19□□□□□ -2.38
HDDC2-207ENST00000608532 METTL15P1P0C7V9 234 aa0.19□□□□□ -2.38
HDDC2-207ENST00000608532 SULT1A3P0DMM9 295 aa0.19□□□□□ -2.38
HDDC2-207ENST00000608532 SULT1A4P0DMN0 295 aa0.19□□□□□ -2.38
HDDC2-207ENST00000608532 HLA-DMBP28068 263 aa0.19□□□□□ -2.38
HDDC2-207ENST00000608532 CSN1S1P47710 185 aa0.19□□□□□ -2.38
HDDC2-207ENST00000608532 RAB13P51153 203 aa0.19□□□□□ -2.38
HDDC2-207ENST00000608532 RPS24P62847 133 aaKnown RBP0.19□□□□□ -2.38
HDDC2-207ENST00000608532 ZNF846Q147U1 533 aa0.19□□□□□ -2.38
HDDC2-207ENST00000608532 COPS6Q7L5N1 327 aa0.19□□□□□ -2.38
HDDC2-207ENST00000608532 SSX8Q7RTT4 187 aa0.19□□□□□ -2.38
HDDC2-207ENST00000608532 CXorf21Q9HAI6 301 aa0.19□□□□□ -2.38
HDDC2-207ENST00000608532 RP1P56715 2156 aa0.18□□□□□ -2.38
HDDC2-207ENST00000608532 EXPH5Q8NEV8 1989 aa0.18□□□□□ -2.38
HDDC2-207ENST00000608532 APOMO95445 188 aa0.18□□□□□ -2.38
HDDC2-207ENST00000608532 ZNF93P35789 620 aaPredicted RBP0.18□□□□□ -2.38
HDDC2-207ENST00000608532 UBE2IP63279 158 aaKnown RBP0.18□□□□□ -2.38
HDDC2-207ENST00000608532 Q8N6K4 173 aa0.18□□□□□ -2.38
HDDC2-207ENST00000608532 OR2T27Q8NH04 317 aa0.18□□□□□ -2.38
HDDC2-207ENST00000608532 MAST4O15021 2626 aa0.17□□□□□ -2.38
HDDC2-207ENST00000608532 COCHO43405 550 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms