RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 ACSM6Q6P461 480 aa9.43□□□□□ -0.9
CTSA-210ENST00000606000 LYSMD2Q8IV50 215 aa9.43□□□□□ -0.9
CTSA-210ENST00000606000 OR5H2Q8NGV7 314 aa9.43□□□□□ -0.9
CTSA-210ENST00000606000 TMEM167AQ8TBQ9 72 aa9.43□□□□□ -0.9
CTSA-210ENST00000606000 ISOC1Q96CN7 298 aa9.43□□□□□ -0.9
CTSA-210ENST00000606000 TMEM68Q96MH6 324 aa9.43□□□□□ -0.9
CTSA-210ENST00000606000 FYTTD1Q96QD9 318 aaKnown RBP9.43□□□□□ -0.9
CTSA-210ENST00000606000 OR2A7Q96R45 310 aa9.43□□□□□ -0.9
CTSA-210ENST00000606000 AKIP1Q9NQ31 210 aa9.43□□□□□ -0.9
CTSA-210ENST00000606000 PLA2G2EQ9NZK7 142 aa9.43□□□□□ -0.9
CTSA-210ENST00000606000 ZNF256Q9Y2P7 627 aaPredicted RBP9.43□□□□□ -0.9
CTSA-210ENST00000606000 LSM4Q9Y4Z0 139 aaKnown RBP9.43□□□□□ -0.9
CTSA-210ENST00000606000 TRAV3A0A0B4J244 114 aa9.42□□□□□ -0.9
CTSA-210ENST00000606000 CGB1A6NKQ9 187 aa9.42□□□□□ -0.9
CTSA-210ENST00000606000 H3BMQ9 156 aa9.42□□□□□ -0.9
CTSA-210ENST00000606000 NOL3O60936 208 aaKnown RBP9.42□□□□□ -0.9
CTSA-210ENST00000606000 S1PR2O95136 353 aa9.42□□□□□ -0.9
CTSA-210ENST00000606000 APOA1P02647 267 aa9.42□□□□□ -0.9
CTSA-210ENST00000606000 RLN1P04808 185 aa9.42□□□□□ -0.9
CTSA-210ENST00000606000 IL6RP08887 468 aaPredicted RBP9.42□□□□□ -0.9
CTSA-210ENST00000606000 AREGP15514 252 aa9.42□□□□□ -0.9
CTSA-210ENST00000606000 SPNP16150 400 aa9.42□□□□□ -0.9
CTSA-210ENST00000606000 RHOGP84095 191 aa9.42□□□□□ -0.9
CTSA-210ENST00000606000 CD69Q07108 199 aa9.42□□□□□ -0.9
CTSA-210ENST00000606000 MSMO1Q15800 293 aa9.42□□□□□ -0.9
CTSA-210ENST00000606000 AADACL3Q5VUY0 350 aa9.42□□□□□ -0.9
CTSA-210ENST00000606000 OR4A47Q6IF82 309 aa9.42□□□□□ -0.9
CTSA-210ENST00000606000 ZNF343Q6P1L6 599 aa9.42□□□□□ -0.9
CTSA-210ENST00000606000 ZNF429Q86V71 674 aa9.42□□□□□ -0.9
CTSA-210ENST00000606000 GPX8Q8TED1 209 aa9.42□□□□□ -0.9
CTSA-210ENST00000606000 RAB2BQ8WUD1 216 aa9.42□□□□□ -0.9
CTSA-210ENST00000606000 MOB3AQ96BX8 217 aa9.42□□□□□ -0.9
CTSA-210ENST00000606000 B9D2Q9BPU9 175 aa9.42□□□□□ -0.9
CTSA-210ENST00000606000 CEPT1Q9Y6K0 416 aa9.42□□□□□ -0.9
CTSA-210ENST00000606000 A0A0G2JLM5 398 aa9.41□□□□□ -0.9
CTSA-210ENST00000606000 CREBL2O60519 120 aaPredicted RBP9.41□□□□□ -0.9
CTSA-210ENST00000606000 OR2J3O76001 311 aa9.41□□□□□ -0.9
CTSA-210ENST00000606000 BRI3O95415 125 aa9.41□□□□□ -0.9
CTSA-210ENST00000606000 REG1AP05451 166 aa9.41□□□□□ -0.9
CTSA-210ENST00000606000 KIR2DS2P43631 304 aa9.41□□□□□ -0.9
CTSA-210ENST00000606000 RPL27AP46776 148 aaKnown RBP9.41□□□□□ -0.9
CTSA-210ENST00000606000 RORCP51449 518 aa9.41□□□□□ -0.9
CTSA-210ENST00000606000 INSL3P51460 131 aa9.41□□□□□ -0.9
CTSA-210ENST00000606000 TMBIM6P55061 237 aa9.41□□□□□ -0.9
CTSA-210ENST00000606000 SYNJ2BPP57105 145 aa9.41□□□□□ -0.9
CTSA-210ENST00000606000 TAS2R46P59540 309 aa9.41□□□□□ -0.9
CTSA-210ENST00000606000 CATR1Q13166 79 aa9.41□□□□□ -0.9
CTSA-210ENST00000606000 EXOSC2Q13868 293 aaKnown RBP9.41□□□□□ -0.9
CTSA-210ENST00000606000 DHRS11Q6UWP2 260 aa9.41□□□□□ -0.9
CTSA-210ENST00000606000 TTC9CQ8N5M4 171 aa9.41□□□□□ -0.9
CTSA-210ENST00000606000 ZBTB34Q8NCN2 500 aa9.41□□□□□ -0.9
CTSA-210ENST00000606000 VSTM2AQ8TAG5 236 aa9.41□□□□□ -0.9
CTSA-210ENST00000606000 SPIN2AQ99865 258 aa9.41□□□□□ -0.9
CTSA-210ENST00000606000 SPIN2BQ9BPZ2 258 aa9.41□□□□□ -0.9
CTSA-210ENST00000606000 RSRP1Q9BUV0 290 aa9.41□□□□□ -0.9
CTSA-210ENST00000606000 RANGRFQ9HD47 186 aaPredicted RBP9.41□□□□□ -0.9
CTSA-210ENST00000606000 HRASLSQ9HDD0 168 aa9.41□□□□□ -0.9
CTSA-210ENST00000606000 S4R3C0 116 aa9.41□□□□□ -0.9
CTSA-210ENST00000606000 DNAH9Q9NYC9 4486 aa9.41□□□□□ -0.9
CTSA-210ENST00000606000 TRBV9A0A0B4J1U6 114 aa9.4□□□□□ -0.9
CTSA-210ENST00000606000 FAM25AB3EWG3 89 aa9.4□□□□□ -0.9
CTSA-210ENST00000606000 FAM25CB3EWG5 89 aa9.4□□□□□ -0.9
CTSA-210ENST00000606000 FAM25GB3EWG6 89 aa9.4□□□□□ -0.9
CTSA-210ENST00000606000 RBFOX2O43251 390 aaKnown RBP eCLIP9.4□□□□□ -0.9
CTSA-210ENST00000606000 PGLYRP1O75594 196 aaPredicted RBP9.4□□□□□ -0.9
CTSA-210ENST00000606000 HRASP01112 189 aa9.4□□□□□ -0.9
CTSA-210ENST00000606000 IGHV3-23P01764 117 aa9.4□□□□□ -0.9
CTSA-210ENST00000606000 ZNF735P0CB33 412 aa9.4□□□□□ -0.9
CTSA-210ENST00000606000 CMTM3Q96MX0 182 aa9.4□□□□□ -0.9
CTSA-210ENST00000606000 RBM38Q9H0Z9 239 aaKnown RBP9.4□□□□□ -0.9
CTSA-210ENST00000606000 TMEM140Q9NV12 185 aa9.4□□□□□ -0.9
CTSA-210ENST00000606000 BET1LQ9NYM9 111 aa9.4□□□□□ -0.9
CTSA-210ENST00000606000 PEF1Q9UBV8 284 aaKnown RBP9.4□□□□□ -0.9
CTSA-210ENST00000606000 ZMAT5Q9UDW3 170 aaKnown RBP9.4□□□□□ -0.9
CTSA-210ENST00000606000 SMIM31A0A1B0GVY4 71 aa9.39□□□□□ -0.91
CTSA-210ENST00000606000 PPP5D1E7EU14 171 aa9.39□□□□□ -0.91
CTSA-210ENST00000606000 M0QYG6 137 aa9.39□□□□□ -0.91
CTSA-210ENST00000606000 BMPR1BO00238 502 aa9.39□□□□□ -0.91
CTSA-210ENST00000606000 HPRT1P00492 218 aa9.39□□□□□ -0.91
CTSA-210ENST00000606000 GP9P14770 177 aa9.39□□□□□ -0.91
CTSA-210ENST00000606000 ZNF182P17025 639 aaPredicted RBP9.39□□□□□ -0.91
CTSA-210ENST00000606000 HLA-GP17693 338 aa9.39□□□□□ -0.91
CTSA-210ENST00000606000 EDN2P20800 178 aa9.39□□□□□ -0.91
CTSA-210ENST00000606000 ZP3P21754 424 aa9.39□□□□□ -0.91
CTSA-210ENST00000606000 TAS2R31P59538 309 aa9.39□□□□□ -0.91
CTSA-210ENST00000606000 RPL8P62917 257 aaKnown RBP9.39□□□□□ -0.91
CTSA-210ENST00000606000 KLF5Q13887 457 aaPredicted RBP9.39□□□□□ -0.91
CTSA-210ENST00000606000 PHLDA2Q53GA4 152 aa9.39□□□□□ -0.91
CTSA-210ENST00000606000 IL34Q6ZMJ4 242 aa9.39□□□□□ -0.91
CTSA-210ENST00000606000 USMG5Q96IX5 58 aa9.39□□□□□ -0.91
CTSA-210ENST00000606000 OR4C12Q96R67 309 aa9.39□□□□□ -0.91
CTSA-210ENST00000606000 ASCL2Q99929 193 aa9.39□□□□□ -0.91
CTSA-210ENST00000606000 MIXL1Q9H2W2 232 aa9.39□□□□□ -0.91
CTSA-210ENST00000606000 SLC2A9Q9NRM0 540 aa9.39□□□□□ -0.91
CTSA-210ENST00000606000 EXTL2Q9UBQ6 330 aa9.39□□□□□ -0.91
CTSA-210ENST00000606000 TNCP24821 2201 aa9.38□□□□□ -0.91
CTSA-210ENST00000606000 FAM223BA6NKX1 122 aa9.38□□□□□ -0.91
CTSA-210ENST00000606000 NPIPB5A8MRT5 1133 aa9.38□□□□□ -0.91
CTSA-210ENST00000606000 UPK2O00526 184 aa9.38□□□□□ -0.91
CTSA-210ENST00000606000 NDUFB8O95169 186 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms