RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 HRH1P35367 487 aa8.15□□□□□ -1.1
TUBE1-210ENST00000604967 CBX5P45973 191 aa8.15□□□□□ -1.1
TUBE1-210ENST00000604967 KLF5Q13887 457 aaPredicted RBP8.15□□□□□ -1.1
TUBE1-210ENST00000604967 MSMO1Q15800 293 aa8.15□□□□□ -1.1
TUBE1-210ENST00000604967 RNASE12Q5GAN4 147 aaKnown RBP8.15□□□□□ -1.1
TUBE1-210ENST00000604967 AADACL3Q5VUY0 350 aa8.15□□□□□ -1.1
TUBE1-210ENST00000604967 SNX29P2Q8IUI4 249 aa8.15□□□□□ -1.1
TUBE1-210ENST00000604967 SPAG16Q8N0X2 631 aa8.15□□□□□ -1.1
TUBE1-210ENST00000604967 TTC9CQ8N5M4 171 aa8.15□□□□□ -1.1
TUBE1-210ENST00000604967 OR51H1Q8NH63 302 aa8.15□□□□□ -1.1
TUBE1-210ENST00000604967 DPF1Q92782 380 aa8.15□□□□□ -1.1
TUBE1-210ENST00000604967 OR2A7Q96R45 310 aa8.15□□□□□ -1.1
TUBE1-210ENST00000604967 ZNF2Q9BSG1 426 aaPredicted RBP8.15□□□□□ -1.1
TUBE1-210ENST00000604967 COA4Q9NYJ1 87 aa8.15□□□□□ -1.1
TUBE1-210ENST00000604967 MRPS7Q9Y2R9 242 aaKnown RBP8.15□□□□□ -1.1
TUBE1-210ENST00000604967 PRELID3BQ9Y3B1 194 aa8.15□□□□□ -1.1
TUBE1-210ENST00000604967 S4R3C0 116 aa8.15□□□□□ -1.1
TUBE1-210ENST00000604967 STAB2Q8WWQ8 2551 aa8.14□□□□□ -1.11
TUBE1-210ENST00000604967 CTDSP2O14595 271 aa8.14□□□□□ -1.11
TUBE1-210ENST00000604967 PGLYRP1O75594 196 aaPredicted RBP8.14□□□□□ -1.11
TUBE1-210ENST00000604967 NDUFB8O95169 186 aa8.14□□□□□ -1.11
TUBE1-210ENST00000604967 REG1AP05451 166 aa8.14□□□□□ -1.11
TUBE1-210ENST00000604967 OR9G9P0C7N8 305 aa8.14□□□□□ -1.11
TUBE1-210ENST00000604967 ZNF735P0CB33 412 aa8.14□□□□□ -1.11
TUBE1-210ENST00000604967 RHOGP84095 191 aa8.14□□□□□ -1.11
TUBE1-210ENST00000604967 POU2AF1Q16633 256 aa8.14□□□□□ -1.11
TUBE1-210ENST00000604967 KLK9Q2XQG4 91 aa8.14□□□□□ -1.11
TUBE1-210ENST00000604967 MMD2Q8IY49 270 aa8.14□□□□□ -1.11
TUBE1-210ENST00000604967 B9D2Q9BPU9 175 aa8.14□□□□□ -1.11
TUBE1-210ENST00000604967 GPR61Q9BZJ8 451 aa8.14□□□□□ -1.11
TUBE1-210ENST00000604967 IFT46Q9NQC8 304 aa8.14□□□□□ -1.11
TUBE1-210ENST00000604967 KLK9Q9UKQ9 250 aa8.14□□□□□ -1.11
TUBE1-210ENST00000604967 ZNF256Q9Y2P7 627 aaPredicted RBP8.14□□□□□ -1.11
TUBE1-210ENST00000604967 IGLC7A0M8Q6 106 aa8.13□□□□□ -1.11
TUBE1-210ENST00000604967 IZUMO1RA6ND01 250 aa8.13□□□□□ -1.11
TUBE1-210ENST00000604967 DBX1A6NMT0 343 aa8.13□□□□□ -1.11
TUBE1-210ENST00000604967 M0QYG6 137 aa8.13□□□□□ -1.11
TUBE1-210ENST00000604967 UPK2O00526 184 aa8.13□□□□□ -1.11
TUBE1-210ENST00000604967 RBFOX2O43251 390 aaKnown RBP eCLIP8.13□□□□□ -1.11
TUBE1-210ENST00000604967 SAP30O75446 220 aa8.13□□□□□ -1.11
TUBE1-210ENST00000604967 OR2J3O76001 311 aa8.13□□□□□ -1.11
TUBE1-210ENST00000604967 IGKV1-39P01597 117 aa8.13□□□□□ -1.11
TUBE1-210ENST00000604967 HLA-AP01891 365 aaKnown RBP8.13□□□□□ -1.11
TUBE1-210ENST00000604967 IGKV1D-39P04432 117 aa8.13□□□□□ -1.11
TUBE1-210ENST00000604967 RLN1P04808 185 aa8.13□□□□□ -1.11
TUBE1-210ENST00000604967 SYNJ2BPP57105 145 aa8.13□□□□□ -1.11
TUBE1-210ENST00000604967 OR2B8PP59922 312 aa8.13□□□□□ -1.11
TUBE1-210ENST00000604967 CBX3Q13185 183 aa8.13□□□□□ -1.11
TUBE1-210ENST00000604967 LAX1Q8IWV1 398 aa8.13□□□□□ -1.11
TUBE1-210ENST00000604967 ZBTB34Q8NCN2 500 aa8.13□□□□□ -1.11
TUBE1-210ENST00000604967 OR10W1Q8NGF6 305 aa8.13□□□□□ -1.11
TUBE1-210ENST00000604967 OR4D10Q8NGI6 311 aa8.13□□□□□ -1.11
TUBE1-210ENST00000604967 OR52I2Q8NH67 350 aa8.13□□□□□ -1.11
TUBE1-210ENST00000604967 FCAMRQ8WWV6 532 aa8.13□□□□□ -1.11
TUBE1-210ENST00000604967 MRGPRFQ96AM1 343 aa8.13□□□□□ -1.11
TUBE1-210ENST00000604967 ZNF414Q96IQ9 312 aa8.13□□□□□ -1.11
TUBE1-210ENST00000604967 CCDC140Q96MF4 163 aa8.13□□□□□ -1.11
TUBE1-210ENST00000604967 TMEM68Q96MH6 324 aa8.13□□□□□ -1.11
TUBE1-210ENST00000604967 CMTM3Q96MX0 182 aa8.13□□□□□ -1.11
TUBE1-210ENST00000604967 FYTTD1Q96QD9 318 aaKnown RBP8.13□□□□□ -1.11
TUBE1-210ENST00000604967 PHB2Q99623 299 aa8.13□□□□□ -1.11
TUBE1-210ENST00000604967 MRPS26Q9BYN8 205 aaKnown RBP8.13□□□□□ -1.11
TUBE1-210ENST00000604967 BET1LQ9NYM9 111 aa8.13□□□□□ -1.11
TUBE1-210ENST00000604967 KLK11Q9UBX7 282 aa8.13□□□□□ -1.11
TUBE1-210ENST00000604967 KMT2CQ8NEZ4 4911 aaKnown RBP8.12□□□□□ -1.11
TUBE1-210ENST00000604967 C13orf42A0A1B0GVH6 325 aa8.12□□□□□ -1.11
TUBE1-210ENST00000604967 PPP5D1E7EU14 171 aa8.12□□□□□ -1.11
TUBE1-210ENST00000604967 IGLV1-51P01701 117 aa8.12□□□□□ -1.11
TUBE1-210ENST00000604967 IGHV3-23P01764 117 aa8.12□□□□□ -1.11
TUBE1-210ENST00000604967 CRYGCP07315 174 aa8.12□□□□□ -1.11
TUBE1-210ENST00000604967 CSN3P07498 182 aa8.12□□□□□ -1.11
TUBE1-210ENST00000604967 ZNF182P17025 639 aaPredicted RBP8.12□□□□□ -1.11
TUBE1-210ENST00000604967 CTRB1P17538 263 aa8.12□□□□□ -1.11
TUBE1-210ENST00000604967 HLA-GP17693 338 aa8.12□□□□□ -1.11
TUBE1-210ENST00000604967 RPL27AP46776 148 aaKnown RBP8.12□□□□□ -1.11
TUBE1-210ENST00000604967 RORCP51449 518 aa8.12□□□□□ -1.11
TUBE1-210ENST00000604967 MECP2P51608 486 aaKnown RBP8.12□□□□□ -1.11
TUBE1-210ENST00000604967 MFAP2P55001 183 aa8.12□□□□□ -1.11
TUBE1-210ENST00000604967 RPL8P62917 257 aaKnown RBP8.12□□□□□ -1.11
TUBE1-210ENST00000604967 EXOSC2Q13868 293 aaKnown RBP8.12□□□□□ -1.11
TUBE1-210ENST00000604967 PHLDA2Q53GA4 152 aa8.12□□□□□ -1.11
TUBE1-210ENST00000604967 CTRB2Q6GPI1 263 aa8.12□□□□□ -1.11
TUBE1-210ENST00000604967 ZNF429Q86V71 674 aa8.12□□□□□ -1.11
TUBE1-210ENST00000604967 Q8N1Y9 231 aa8.12□□□□□ -1.11
TUBE1-210ENST00000604967 OR5H2Q8NGV7 314 aa8.12□□□□□ -1.11
TUBE1-210ENST00000604967 USMG5Q96IX5 58 aa8.12□□□□□ -1.11
TUBE1-210ENST00000604967 ASCL2Q99929 193 aa8.12□□□□□ -1.11
TUBE1-210ENST00000604967 THAP7Q9BT49 309 aaPredicted RBP8.12□□□□□ -1.11
TUBE1-210ENST00000604967 SCPEP1Q9HB40 452 aa8.12□□□□□ -1.11
TUBE1-210ENST00000604967 RANGRFQ9HD47 186 aaPredicted RBP8.12□□□□□ -1.11
TUBE1-210ENST00000604967 SLC2A9Q9NRM0 540 aa8.12□□□□□ -1.11
TUBE1-210ENST00000604967 TMEM140Q9NV12 185 aa8.12□□□□□ -1.11
TUBE1-210ENST00000604967 PEF1Q9UBV8 284 aaKnown RBP8.12□□□□□ -1.11
TUBE1-210ENST00000604967 NSG2Q9Y328 171 aa8.12□□□□□ -1.11
TUBE1-210ENST00000604967 SORL1Q92673 2214 aa8.12□□□□□ -1.11
TUBE1-210ENST00000604967 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.11□□□□□ -1.11
TUBE1-210ENST00000604967 MFSD2BA6NFX1 497 aa8.11□□□□□ -1.11
TUBE1-210ENST00000604967 NPIPB5A8MRT5 1133 aa8.11□□□□□ -1.11
TUBE1-210ENST00000604967 HPRT1P00492 218 aa8.11□□□□□ -1.11
TUBE1-210ENST00000604967 PSMB6P28072 239 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms