RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 KPTNQ9Y664 436 aa12.32□□□□□ -0.44
CCDC12-211ENST00000604367 C15orf61A6NNL5 157 aa12.31□□□□□ -0.44
CCDC12-211ENST00000604367 OPN1MWP04001 364 aa12.31□□□□□ -0.44
CCDC12-211ENST00000604367 OR8U8P0C7N1 319 aa12.31□□□□□ -0.44
CCDC12-211ENST00000604367 OPN1MW2P0DN77 364 aa12.31□□□□□ -0.44
CCDC12-211ENST00000604367 OPN1MW3P0DN78 364 aa12.31□□□□□ -0.44
CCDC12-211ENST00000604367 HOXA1P49639 335 aaPredicted RBP12.31□□□□□ -0.44
CCDC12-211ENST00000604367 FGF8P55075 233 aaPredicted RBP12.31□□□□□ -0.44
CCDC12-211ENST00000604367 SERF2P84101 59 aa12.31□□□□□ -0.44
CCDC12-211ENST00000604367 TFF3Q07654 80 aa12.31□□□□□ -0.44
CCDC12-211ENST00000604367 ZNF726P1Q15940 193 aa12.31□□□□□ -0.44
CCDC12-211ENST00000604367 ATP6V1FQ16864 119 aa12.31□□□□□ -0.44
CCDC12-211ENST00000604367 AVPI1Q5T686 147 aa12.31□□□□□ -0.44
CCDC12-211ENST00000604367 FAM122CQ6P4D5 195 aa12.31□□□□□ -0.44
CCDC12-211ENST00000604367 SSX7Q7RTT5 188 aa12.31□□□□□ -0.44
CCDC12-211ENST00000604367 OR10A7Q8NGE5 316 aa12.31□□□□□ -0.44
CCDC12-211ENST00000604367 OR13D1Q8NGV5 346 aa12.31□□□□□ -0.44
CCDC12-211ENST00000604367 HINT2Q9BX68 163 aa12.31□□□□□ -0.44
CCDC12-211ENST00000604367 KIAA1456Q9P272 454 aa12.31□□□□□ -0.44
CCDC12-211ENST00000604367 TCF19Q9Y242 345 aa12.31□□□□□ -0.44
CCDC12-211ENST00000604367 TNCP24821 2201 aa12.31□□□□□ -0.44
CCDC12-211ENST00000604367 BTBD17A6NE02 478 aa12.31□□□□□ -0.44
CCDC12-211ENST00000604367 H7C2Y5 167 aa12.31□□□□□ -0.44
CCDC12-211ENST00000604367 RRHO14718 337 aa12.31□□□□□ -0.44
CCDC12-211ENST00000604367 HRASP01112 189 aa12.31□□□□□ -0.44
CCDC12-211ENST00000604367 CEBPGP53567 150 aa12.31□□□□□ -0.44
CCDC12-211ENST00000604367 DIAPH2-AS1Q14236 149 aa12.31□□□□□ -0.44
CCDC12-211ENST00000604367 RTL8BQ17RB0 113 aa12.31□□□□□ -0.44
CCDC12-211ENST00000604367 ETV3LQ6ZN32 361 aa12.31□□□□□ -0.44
CCDC12-211ENST00000604367 CLRN3Q8NCR9 226 aa12.31□□□□□ -0.44
CCDC12-211ENST00000604367 OR10X1Q8NGY0 326 aa12.31□□□□□ -0.44
CCDC12-211ENST00000604367 OR52E5Q8NH55 327 aa12.31□□□□□ -0.44
CCDC12-211ENST00000604367 MRPL20Q9BYC9 149 aaKnown RBP12.31□□□□□ -0.44
CCDC12-211ENST00000604367 SLC35B3Q9H1N7 401 aa12.31□□□□□ -0.44
CCDC12-211ENST00000604367 MALRD1Q5VYJ5 2156 aa12.31□□□□□ -0.44
CCDC12-211ENST00000604367 HRNRQ86YZ3 2850 aaPredicted RBP12.3□□□□□ -0.44
CCDC12-211ENST00000604367 SRRM4A7MD48 611 aaKnown RBP12.3□□□□□ -0.44
CCDC12-211ENST00000604367 NDUFA2O43678 99 aa12.3□□□□□ -0.44
CCDC12-211ENST00000604367 VDAC2P45880 294 aaPredicted RBP12.3□□□□□ -0.44
CCDC12-211ENST00000604367 RAB2AP61019 212 aa12.3□□□□□ -0.44
CCDC12-211ENST00000604367 GNB2P62879 340 aa12.3□□□□□ -0.44
CCDC12-211ENST00000604367 ZNF833PQ6ZTB9 187 aa12.3□□□□□ -0.44
CCDC12-211ENST00000604367 ZNF429Q86V71 674 aa12.3□□□□□ -0.44
CCDC12-211ENST00000604367 C20orf24Q9BUV8 137 aa12.3□□□□□ -0.44
CCDC12-211ENST00000604367 AKR1C3P42330 323 aa12.3□□□□□ -0.44
CCDC12-211ENST00000604367 DLX1P56177 255 aa12.3□□□□□ -0.44
CCDC12-211ENST00000604367 PRB3Q04118 309 aaPredicted RBP12.3□□□□□ -0.44
CCDC12-211ENST00000604367 TMEM41BQ5BJD5 291 aa12.3□□□□□ -0.44
CCDC12-211ENST00000604367 ACSM6Q6P461 480 aa12.3□□□□□ -0.44
CCDC12-211ENST00000604367 RXFP4Q8TDU9 374 aa12.3□□□□□ -0.44
CCDC12-211ENST00000604367 RCC1LQ96I51 464 aaKnown RBP12.3□□□□□ -0.44
CCDC12-211ENST00000604367 PARD6GQ9BYG4 376 aaPredicted RBP12.3□□□□□ -0.44
CCDC12-211ENST00000604367 PKD1L2Q7Z442 2459 aa12.29□□□□□ -0.44
CCDC12-211ENST00000604367 TACC2O95359 2948 aa12.29□□□□□ -0.44
CCDC12-211ENST00000604367 SMCO3A2RU48 225 aa12.29□□□□□ -0.44
CCDC12-211ENST00000604367 IGKV1D-33P01593 117 aa12.29□□□□□ -0.44
CCDC12-211ENST00000604367 IGKV1-33P01594 117 aa12.29□□□□□ -0.44
CCDC12-211ENST00000604367 HBE1P02100 147 aa12.29□□□□□ -0.44
CCDC12-211ENST00000604367 ARG1P05089 322 aa12.29□□□□□ -0.44
CCDC12-211ENST00000604367 FBP1P09467 338 aa12.29□□□□□ -0.44
CCDC12-211ENST00000604367 TMEM155Q4W5P6 130 aa12.29□□□□□ -0.44
CCDC12-211ENST00000604367 SP5Q6BEB4 398 aaPredicted RBP12.29□□□□□ -0.44
CCDC12-211ENST00000604367 ZNF787Q6DD87 383 aa12.29□□□□□ -0.44
CCDC12-211ENST00000604367 GNG13Q9P2W3 67 aa12.29□□□□□ -0.44
CCDC12-211ENST00000604367 HMGB3O15347 200 aaKnown RBP12.29□□□□□ -0.44
CCDC12-211ENST00000604367 S100A6P06703 90 aa12.29□□□□□ -0.44
CCDC12-211ENST00000604367 SFTPCP11686 197 aa12.29□□□□□ -0.44
CCDC12-211ENST00000604367 CLDND2Q8NHS1 167 aa12.29□□□□□ -0.44
CCDC12-211ENST00000604367 TMEM204Q9BSN7 226 aa12.29□□□□□ -0.44
CCDC12-211ENST00000604367 NPCDR1Q9BY65 106 aa12.29□□□□□ -0.44
CCDC12-211ENST00000604367 TMEM14BQ9NUH8 114 aa12.29□□□□□ -0.44
CCDC12-211ENST00000604367 RALYQ9UKM9 306 aaKnown RBP12.29□□□□□ -0.44
CCDC12-211ENST00000604367 A0A1B0GW64 132 aa12.28□□□□□ -0.44
CCDC12-211ENST00000604367 ZFP92A6NM28 416 aa12.28□□□□□ -0.44
CCDC12-211ENST00000604367 J3QR06 171 aa12.28□□□□□ -0.44
CCDC12-211ENST00000604367 IFNA4P05014 189 aa12.28□□□□□ -0.44
CCDC12-211ENST00000604367 DLX6P56179 175 aa12.28□□□□□ -0.44
CCDC12-211ENST00000604367 HSPE1P61604 102 aaKnown RBP12.28□□□□□ -0.44
CCDC12-211ENST00000604367 RPP30P78346 268 aaKnown RBP12.28□□□□□ -0.44
CCDC12-211ENST00000604367 RPP25LQ8N5L8 163 aaKnown RBP12.28□□□□□ -0.44
CCDC12-211ENST00000604367 RAB39BQ96DA2 213 aa12.28□□□□□ -0.44
CCDC12-211ENST00000604367 TIMM9Q9Y5J7 89 aa12.28□□□□□ -0.44
CCDC12-211ENST00000604367 M0R036 132 aa12.28□□□□□ -0.44
CCDC12-211ENST00000604367 CD1BP29016 333 aa12.28□□□□□ -0.44
CCDC12-211ENST00000604367 PDLIM3Q53GG5 364 aaPredicted RBP12.28□□□□□ -0.44
CCDC12-211ENST00000604367 ANKRD39Q53RE8 183 aa12.28□□□□□ -0.44
CCDC12-211ENST00000604367 ZNF709Q8N972 641 aa12.28□□□□□ -0.44
CCDC12-211ENST00000604367 TMEM170AQ8WVE7 144 aa12.28□□□□□ -0.44
CCDC12-211ENST00000604367 FOXA2Q9Y261 457 aaPredicted RBP12.28□□□□□ -0.44
CCDC12-211ENST00000604367 OR51B2Q9Y5P1 312 aa12.28□□□□□ -0.44
CCDC12-211ENST00000604367 APOA2P02652 100 aa12.27□□□□□ -0.44
CCDC12-211ENST00000604367 SNRNP70P08621 437 aaKnown RBP12.27□□□□□ -0.44
CCDC12-211ENST00000604367 IGHV1-8P0DP01 117 aa12.27□□□□□ -0.44
CCDC12-211ENST00000604367 DEFA4P12838 97 aa12.27□□□□□ -0.44
CCDC12-211ENST00000604367 UQCRFS1P47985 274 aa12.27□□□□□ -0.44
CCDC12-211ENST00000604367 ICAM4Q14773 271 aa12.27□□□□□ -0.44
CCDC12-211ENST00000604367 VWC2Q2TAL6 325 aa12.27□□□□□ -0.44
CCDC12-211ENST00000604367 SOHLH1Q5JUK2 328 aa12.27□□□□□ -0.44
CCDC12-211ENST00000604367 FFAR4Q5NUL3 377 aa12.27□□□□□ -0.44
CCDC12-211ENST00000604367 HARBI1Q96MB7 349 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms