RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 MFSD2BA6NFX1 497 aa12.51□□□□□ -0.41
CCDC12-210ENST00000604181 RPL27AP46776 148 aaKnown RBP12.51□□□□□ -0.41
CCDC12-210ENST00000604181 TNFRSF9Q07011 255 aa12.51□□□□□ -0.41
CCDC12-210ENST00000604181 KCTD9Q7L273 389 aa12.51□□□□□ -0.41
CCDC12-210ENST00000604181 SLC25A42Q86VD7 318 aa12.51□□□□□ -0.41
CCDC12-210ENST00000604181 WFDC3Q8IUB2 231 aa12.51□□□□□ -0.41
CCDC12-210ENST00000604181 PUSL1Q8N0Z8 303 aaKnown RBP12.51□□□□□ -0.41
CCDC12-210ENST00000604181 ZNF645Q8N7E2 425 aa12.51□□□□□ -0.41
CCDC12-210ENST00000604181 GPHA2Q96T91 129 aa12.51□□□□□ -0.41
CCDC12-210ENST00000604181 SLC2A9Q9NRM0 540 aa12.51□□□□□ -0.41
CCDC12-210ENST00000604181 KIAA1109Q2LD37 5005 aa12.51□□□□□ -0.41
CCDC12-210ENST00000604181 RYR1P21817 5038 aa12.51□□□□□ -0.41
CCDC12-210ENST00000604181 IGHV3-35A0A0C4DH35 117 aa12.5□□□□□ -0.41
CCDC12-210ENST00000604181 NUPR2A6NF83 97 aa12.5□□□□□ -0.41
CCDC12-210ENST00000604181 ARL6IP5O75915 188 aa12.5□□□□□ -0.41
CCDC12-210ENST00000604181 KBTBD11O94819 623 aa12.5□□□□□ -0.41
CCDC12-210ENST00000604181 REG1AP05451 166 aa12.5□□□□□ -0.41
CCDC12-210ENST00000604181 CRYGCP07315 174 aa12.5□□□□□ -0.41
CCDC12-210ENST00000604181 ZNF735P0CB33 412 aa12.5□□□□□ -0.41
CCDC12-210ENST00000604181 CTRB1P17538 263 aa12.5□□□□□ -0.41
CCDC12-210ENST00000604181 NFYAP23511 347 aaPredicted RBP12.5□□□□□ -0.41
CCDC12-210ENST00000604181 EIF4EBP1Q13541 118 aaPredicted RBP12.5□□□□□ -0.41
CCDC12-210ENST00000604181 KLK9Q2XQG4 91 aa12.5□□□□□ -0.41
CCDC12-210ENST00000604181 DEFB135Q30KP9 77 aa12.5□□□□□ -0.41
CCDC12-210ENST00000604181 FAM209BQ5JX69 171 aa12.5□□□□□ -0.41
CCDC12-210ENST00000604181 CTRB2Q6GPI1 263 aa12.5□□□□□ -0.41
CCDC12-210ENST00000604181 Q6ZS49 121 aa12.5□□□□□ -0.41
CCDC12-210ENST00000604181 TMEM167AQ8TBQ9 72 aa12.5□□□□□ -0.41
CCDC12-210ENST00000604181 UBQLN2Q9UHD9 624 aa12.5□□□□□ -0.41
CCDC12-210ENST00000604181 KLK9Q9UKQ9 250 aa12.5□□□□□ -0.41
CCDC12-210ENST00000604181 RBMX2Q9Y388 322 aaKnown RBP12.5□□□□□ -0.41
CCDC12-210ENST00000604181 CREBL2O60519 120 aaPredicted RBP12.49□□□□□ -0.41
CCDC12-210ENST00000604181 C8orf88P0DMB2 117 aa12.49□□□□□ -0.41
CCDC12-210ENST00000604181 PSMB6P28072 239 aa12.49□□□□□ -0.41
CCDC12-210ENST00000604181 FAM106AQ4KMX7 169 aa12.49□□□□□ -0.41
CCDC12-210ENST00000604181 OR2A7Q96R45 310 aa12.49□□□□□ -0.41
CCDC12-210ENST00000604181 PKHD1P08F94 4074 aa12.48□□□□□ -0.41
CCDC12-210ENST00000604181 IGLV11-55A0A075B6I3 123 aa12.48□□□□□ -0.41
CCDC12-210ENST00000604181 CASQ2O14958 399 aaPredicted RBP12.48□□□□□ -0.41
CCDC12-210ENST00000604181 SPRY2O43597 315 aa12.48□□□□□ -0.41
CCDC12-210ENST00000604181 S1PR2O95136 353 aa12.48□□□□□ -0.41
CCDC12-210ENST00000604181 HLA-DQB1P01920 261 aa12.48□□□□□ -0.41
CCDC12-210ENST00000604181 ARFRP1Q13795 201 aa12.48□□□□□ -0.41
CCDC12-210ENST00000604181 ZNF585BQ52M93 769 aa12.48□□□□□ -0.41
CCDC12-210ENST00000604181 SSX9Q7RTT3 188 aa12.48□□□□□ -0.41
CCDC12-210ENST00000604181 EEF1AKMT3Q96AZ1 226 aa12.48□□□□□ -0.41
CCDC12-210ENST00000604181 OR2W1Q9Y3N9 320 aa12.48□□□□□ -0.41
CCDC12-210ENST00000604181 FAT2Q9NYQ8 4349 aa12.48□□□□□ -0.41
CCDC12-210ENST00000604181 DNAH2Q9P225 4427 aa12.47□□□□□ -0.41
CCDC12-210ENST00000604181 DPPA5A6NC42 116 aa12.47□□□□□ -0.41
CCDC12-210ENST00000604181 CLEC3BP05452 202 aa12.47□□□□□ -0.41
CCDC12-210ENST00000604181 GADD45AP24522 165 aa12.47□□□□□ -0.41
CCDC12-210ENST00000604181 MAP2K4P45985 399 aa12.47□□□□□ -0.41
CCDC12-210ENST00000604181 MLLT11Q13015 90 aaPredicted RBP12.47□□□□□ -0.41
CCDC12-210ENST00000604181 TRAM1Q15629 374 aa12.47□□□□□ -0.41
CCDC12-210ENST00000604181 Q6ZWC4 215 aa12.47□□□□□ -0.41
CCDC12-210ENST00000604181 NR2C2APQ86WQ0 139 aa12.47□□□□□ -0.41
CCDC12-210ENST00000604181 OR1L6Q8NGR2 347 aa12.47□□□□□ -0.41
CCDC12-210ENST00000604181 DUSP21Q9H596 190 aa12.47□□□□□ -0.41
CCDC12-210ENST00000604181 SPATA2Q9UM82 520 aa12.47□□□□□ -0.41
CCDC12-210ENST00000604181 TP53TG1Q9Y2A0 90 aa12.47□□□□□ -0.41
CCDC12-210ENST00000604181 PRELID3BQ9Y3B1 194 aa12.47□□□□□ -0.41
CCDC12-210ENST00000604181 IFITM5A6NNB3 132 aa12.46□□□□□ -0.41
CCDC12-210ENST00000604181 RAB6AP20340 208 aa12.46□□□□□ -0.41
CCDC12-210ENST00000604181 GPR183P32249 361 aa12.46□□□□□ -0.41
CCDC12-210ENST00000604181 BMI1P35226 326 aa12.46□□□□□ -0.41
CCDC12-210ENST00000604181 TALDO1P37837 337 aa12.46□□□□□ -0.41
CCDC12-210ENST00000604181 SSX1Q16384 188 aa12.46□□□□□ -0.41
CCDC12-210ENST00000604181 ANKRD55Q3KP44 614 aa12.46□□□□□ -0.41
CCDC12-210ENST00000604181 ODF3L2Q3SX64 289 aa12.46□□□□□ -0.41
CCDC12-210ENST00000604181 OR4A47Q6IF82 309 aa12.46□□□□□ -0.41
CCDC12-210ENST00000604181 OR4S2Q8NH73 311 aa12.46□□□□□ -0.41
CCDC12-210ENST00000604181 TCTEX1D2Q8WW35 142 aa12.46□□□□□ -0.41
CCDC12-210ENST00000604181 SCN3BQ9NY72 215 aa12.46□□□□□ -0.41
CCDC12-210ENST00000604181 MRPS7Q9Y2R9 242 aaKnown RBP12.46□□□□□ -0.41
CCDC12-210ENST00000604181 TRAV3A0A0B4J244 114 aa12.45□□□□□ -0.42
CCDC12-210ENST00000604181 TRAV25A0A0B4J276 109 aa12.45□□□□□ -0.42
CCDC12-210ENST00000604181 CD36P16671 472 aa12.45□□□□□ -0.42
CCDC12-210ENST00000604181 DTYMKP23919 212 aa12.45□□□□□ -0.42
CCDC12-210ENST00000604181 CRHBPP24387 322 aa12.45□□□□□ -0.42
CCDC12-210ENST00000604181 PSMA1P25786 263 aaKnown RBP12.45□□□□□ -0.42
CCDC12-210ENST00000604181 MFSD4AQ8N468 514 aa12.45□□□□□ -0.42
CCDC12-210ENST00000604181 OR2C3Q8N628 320 aa12.45□□□□□ -0.42
CCDC12-210ENST00000604181 ZNF502Q8TBZ5 544 aa12.45□□□□□ -0.42
CCDC12-210ENST00000604181 NUDCD2Q8WVJ2 157 aa12.45□□□□□ -0.42
CCDC12-210ENST00000604181 RNF183Q96D59 192 aa12.45□□□□□ -0.42
CCDC12-210ENST00000604181 MGLLQ99685 303 aa12.45□□□□□ -0.42
CCDC12-210ENST00000604181 TAS2R8Q9NYW2 309 aa12.45□□□□□ -0.42
CCDC12-210ENST00000604181 IGLC7A0M8Q6 106 aa12.44□□□□□ -0.42
CCDC12-210ENST00000604181 SMIM30A4D0T7 59 aa12.44□□□□□ -0.42
CCDC12-210ENST00000604181 RPL35AP18077 110 aaKnown RBP12.44□□□□□ -0.42
CCDC12-210ENST00000604181 MAS1LP35410 378 aa12.44□□□□□ -0.42
CCDC12-210ENST00000604181 PSMD7P51665 324 aa12.44□□□□□ -0.42
CCDC12-210ENST00000604181 RPL8P62917 257 aaKnown RBP12.44□□□□□ -0.42
CCDC12-210ENST00000604181 CDNFQ49AH0 187 aa12.44□□□□□ -0.42
CCDC12-210ENST00000604181 RBPMS2Q6ZRY4 209 aaKnown RBP12.44□□□□□ -0.42
CCDC12-210ENST00000604181 VSTM2AQ8TAG5 236 aa12.44□□□□□ -0.42
CCDC12-210ENST00000604181 PHLDA1Q8WV24 401 aaPredicted RBP12.44□□□□□ -0.42
CCDC12-210ENST00000604181 MRPL27Q9P0M9 148 aaKnown RBP12.44□□□□□ -0.42
CCDC12-210ENST00000604181 TRBV7-1A0A0A6YYK4 115 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms