RNA–Protein interactions for RNA: ENST00000603232.6

CELF4-223, Transcript of CUGBP Elav-like family member 4, human

APPRIS ALT1 TSL 1 (best) BASIC

Gene CELF4, Length 1,906 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CELF4-223	ENST00000603232	C17orf98	A8MV24	154 aa		12.79	□□□□□ -0.36
CELF4-223	ENST00000603232	GGCT	O75223	188 aa	Known RBP	12.79	□□□□□ -0.36
CELF4-223	ENST00000603232	CGA	P01215	116 aa		12.79	□□□□□ -0.36
CELF4-223	ENST00000603232	GCG	P01275	180 aa		12.79	□□□□□ -0.36
CELF4-223	ENST00000603232	CD99	P14209	185 aa		12.79	□□□□□ -0.36
CELF4-223	ENST00000603232	SRP14	P37108	136 aa	Known RBP	12.79	□□□□□ -0.36
CELF4-223	ENST00000603232	IDH3G	P51553	393 aa	Predicted RBP	12.79	□□□□□ -0.36
CELF4-223	ENST00000603232	HTD2	P86397	168 aa		12.79	□□□□□ -0.36
CELF4-223	ENST00000603232	ALKBH6	Q3KRA9	238 aa		12.79	□□□□□ -0.36
CELF4-223	ENST00000603232	H2BFWT	Q7Z2G1	175 aa		12.79	□□□□□ -0.36
CELF4-223	ENST00000603232	UBALD1	Q8TB05	177 aa		12.79	□□□□□ -0.36
CELF4-223	ENST00000603232	KLF14	Q8TD94	323 aa	Predicted RBP	12.79	□□□□□ -0.36
CELF4-223	ENST00000603232	TMEM170A	Q8WVE7	144 aa		12.79	□□□□□ -0.36
CELF4-223	ENST00000603232	NEIL1	Q96FI4	390 aa	Predicted RBP	12.79	□□□□□ -0.36
CELF4-223	ENST00000603232	COQ2	Q96H96	371 aa		12.79	□□□□□ -0.36
CELF4-223	ENST00000603232	CXXC4	Q9H2H0	198 aa		12.79	□□□□□ -0.36
CELF4-223	ENST00000603232	CLN8	Q9UBY8	286 aa		12.79	□□□□□ -0.36
CELF4-223	ENST00000603232	COL12A1	Q99715	3063 aa		12.78	□□□□□ -0.36
CELF4-223	ENST00000603232		A0A1B0GWJ7	208 aa		12.78	□□□□□ -0.36
CELF4-223	ENST00000603232	FAM90A27P	A6NNH2	459 aa		12.78	□□□□□ -0.36
CELF4-223	ENST00000603232	MLNR	O43193	412 aa		12.78	□□□□□ -0.36
CELF4-223	ENST00000603232	IGKV3-15	P01624	115 aa		12.78	□□□□□ -0.36
CELF4-223	ENST00000603232	GALR1	P47211	349 aa		12.78	□□□□□ -0.36
CELF4-223	ENST00000603232	ERVS71-1	P61550	626 aa		12.78	□□□□□ -0.36
CELF4-223	ENST00000603232	SRSF1	Q07955	248 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
CELF4-223	ENST00000603232	ZNF816	Q0VGE8	651 aa	Predicted RBP	12.78	□□□□□ -0.36
CELF4-223	ENST00000603232	ACOT6	Q3I5F7	207 aa	Predicted RBP	12.78	□□□□□ -0.36
CELF4-223	ENST00000603232	ZNF709	Q8N972	641 aa		12.78	□□□□□ -0.36
CELF4-223	ENST00000603232	OR52L2P	Q8NGH6	319 aa		12.78	□□□□□ -0.36
CELF4-223	ENST00000603232	BTF3L4	Q96K17	158 aa		12.78	□□□□□ -0.36
CELF4-223	ENST00000603232	NDUFAF3	Q9BU61	184 aa		12.78	□□□□□ -0.36
CELF4-223	ENST00000603232	SLC25A22	Q9H936	323 aa		12.78	□□□□□ -0.36
CELF4-223	ENST00000603232	GCN1	Q92616	2671 aa	Known RBP	12.78	□□□□□ -0.36
CELF4-223	ENST00000603232	UTP20	O75691	2785 aa	Known RBP	12.78	□□□□□ -0.36
CELF4-223	ENST00000603232	PPP5D1	E7EU14	171 aa		12.78	□□□□□ -0.36
CELF4-223	ENST00000603232	TMPRSS2	O15393	492 aa		12.78	□□□□□ -0.36
CELF4-223	ENST00000603232	MPDU1	O75352	247 aa		12.78	□□□□□ -0.36
CELF4-223	ENST00000603232	GRP	P07492	148 aa		12.78	□□□□□ -0.36
CELF4-223	ENST00000603232	ADH4	P08319	380 aa		12.78	□□□□□ -0.36
CELF4-223	ENST00000603232	KITLG	P21583	273 aa		12.78	□□□□□ -0.36
CELF4-223	ENST00000603232	LCN2	P80188	198 aa		12.78	□□□□□ -0.36
CELF4-223	ENST00000603232	PDLIM3	Q53GG5	364 aa	Predicted RBP	12.78	□□□□□ -0.36
CELF4-223	ENST00000603232		Q6ZT83	130 aa		12.78	□□□□□ -0.36
CELF4-223	ENST00000603232		Q8N7P7	452 aa		12.78	□□□□□ -0.36
CELF4-223	ENST00000603232	C1orf162	Q8NEQ5	155 aa	Predicted RBP	12.78	□□□□□ -0.36
CELF4-223	ENST00000603232	TXNDC17	Q9BRA2	123 aa		12.78	□□□□□ -0.36
CELF4-223	ENST00000603232	SFXN3	Q9BWM7	321 aa		12.78	□□□□□ -0.36
CELF4-223	ENST00000603232	PROCR	Q9UNN8	238 aa		12.78	□□□□□ -0.36
CELF4-223	ENST00000603232	WDR83OS	Q9Y284	106 aa		12.78	□□□□□ -0.36
CELF4-223	ENST00000603232	PRR14L	Q5THK1	2151 aa		12.77	□□□□□ -0.36
CELF4-223	ENST00000603232	P2RY6	Q15077	328 aa		12.77	□□□□□ -0.37
CELF4-223	ENST00000603232	ACTL10	Q5JWF8	245 aa		12.77	□□□□□ -0.37
CELF4-223	ENST00000603232	C1orf174	Q8IYL3	243 aa		12.77	□□□□□ -0.37
CELF4-223	ENST00000603232	OR4F5	Q8NH21	305 aa		12.77	□□□□□ -0.37
CELF4-223	ENST00000603232	OR52E5	Q8NH55	327 aa		12.77	□□□□□ -0.37
CELF4-223	ENST00000603232	RPUSD4	Q96CM3	377 aa	Known RBP	12.77	□□□□□ -0.37
CELF4-223	ENST00000603232	OR4F4	Q96R69	305 aa		12.77	□□□□□ -0.37
CELF4-223	ENST00000603232	IMMP2L	Q96T52	175 aa		12.77	□□□□□ -0.37
CELF4-223	ENST00000603232	NEU1	Q99519	415 aa		12.77	□□□□□ -0.37
CELF4-223	ENST00000603232	GAB2	Q9UQC2	676 aa		12.77	□□□□□ -0.37
CELF4-223	ENST00000603232	USF3	Q68DE3	2245 aa		12.77	□□□□□ -0.37
CELF4-223	ENST00000603232	ADGRG4	Q8IZF6	3080 aa		12.77	□□□□□ -0.37
CELF4-223	ENST00000603232	LRRK2	Q5S007	2527 aa		12.77	□□□□□ -0.37
CELF4-223	ENST00000603232	XKRY2	A2RUG3	117 aa		12.76	□□□□□ -0.37
CELF4-223	ENST00000603232	PDE6D	O43924	150 aa		12.76	□□□□□ -0.37
CELF4-223	ENST00000603232	CEBPD	P49716	269 aa	Predicted RBP	12.76	□□□□□ -0.37
CELF4-223	ENST00000603232	SPCS3	P61009	180 aa		12.76	□□□□□ -0.37
CELF4-223	ENST00000603232	AES	Q08117	197 aa		12.76	□□□□□ -0.37
CELF4-223	ENST00000603232	SSX2	Q16385	188 aa		12.76	□□□□□ -0.37
CELF4-223	ENST00000603232	ZNF474	Q6S9Z5	364 aa	Predicted RBP	12.76	□□□□□ -0.37
CELF4-223	ENST00000603232	WDR82	Q6UXN9	313 aa		12.76	□□□□□ -0.37
CELF4-223	ENST00000603232	OBP2B	Q9NPH6	170 aa		12.76	□□□□□ -0.37
CELF4-223	ENST00000603232	HCFC1	P51610	2035 aa		12.76	□□□□□ -0.37
CELF4-223	ENST00000603232	C15orf62	A8K5M9	175 aa		12.76	□□□□□ -0.37
CELF4-223	ENST00000603232		J3QKU1	62 aa		12.76	□□□□□ -0.37
CELF4-223	ENST00000603232	GYPA	P02724	150 aa		12.76	□□□□□ -0.37
CELF4-223	ENST00000603232	MPV17	P39210	176 aa		12.76	□□□□□ -0.37
CELF4-223	ENST00000603232	CDC34	P49427	236 aa	Predicted RBP	12.76	□□□□□ -0.37
CELF4-223	ENST00000603232	TFF3	Q07654	80 aa		12.76	□□□□□ -0.37
CELF4-223	ENST00000603232	ZNF808	Q8N4W9	903 aa	Predicted RBP	12.76	□□□□□ -0.37
CELF4-223	ENST00000603232	ITLN2	Q8WWU7	325 aa	Predicted RBP	12.76	□□□□□ -0.37
CELF4-223	ENST00000603232	PCGF1	Q9BSM1	259 aa		12.76	□□□□□ -0.37
CELF4-223	ENST00000603232	ELOVL1	Q9BW60	279 aa		12.76	□□□□□ -0.37
CELF4-223	ENST00000603232	CHODL	Q9H9P2	273 aa		12.76	□□□□□ -0.37
CELF4-223	ENST00000603232	PLSCR4	Q9NRQ2	329 aa		12.76	□□□□□ -0.37
CELF4-223	ENST00000603232	DOPEY1	Q5JWR5	2465 aa		12.75	□□□□□ -0.37
CELF4-223	ENST00000603232	MARCH11	A6NNE9	402 aa		12.75	□□□□□ -0.37
CELF4-223	ENST00000603232	LINC00473	A8K010	186 aa		12.75	□□□□□ -0.37
CELF4-223	ENST00000603232	C15orf65	H3BRN8	121 aa		12.75	□□□□□ -0.37
CELF4-223	ENST00000603232	RBFOX2	O43251	390 aa	Known RBP eCLIP	12.75	□□□□□ -0.37
CELF4-223	ENST00000603232	CHRNB4	P30926	498 aa		12.75	□□□□□ -0.37
CELF4-223	ENST00000603232	GABRA2	P47869	451 aa		12.75	□□□□□ -0.37
CELF4-223	ENST00000603232	RPP30	P78346	268 aa	Known RBP	12.75	□□□□□ -0.37
CELF4-223	ENST00000603232	ZNF124	Q15973	351 aa		12.75	□□□□□ -0.37
CELF4-223	ENST00000603232	CR1L	Q2VPA4	569 aa		12.75	□□□□□ -0.37
CELF4-223	ENST00000603232	SMIM21	Q3B7S5	101 aa		12.75	□□□□□ -0.37
CELF4-223	ENST00000603232	ZDHHC16	Q969W1	377 aa		12.75	□□□□□ -0.37
CELF4-223	ENST00000603232	OR6C3	Q9NZP0	311 aa		12.75	□□□□□ -0.37
CELF4-223	ENST00000603232	BAHCC1	Q9P281	2608 aa		12.75	□□□□□ -0.37
CELF4-223	ENST00000603232	PAGE4	O60829	102 aa		12.74	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms