RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 FYTTD1Q96QD9 318 aaKnown RBP9.93□□□□□ -0.82
RPS28-204ENST00000602140 OR2A7Q96R45 310 aa9.93□□□□□ -0.82
RPS28-204ENST00000602140 HSD17B10Q99714 261 aaKnown RBP9.93□□□□□ -0.82
RPS28-204ENST00000602140 WFDC10AQ9H1F0 79 aa9.93□□□□□ -0.82
RPS28-204ENST00000602140 DCSTAMPQ9H295 470 aa9.93□□□□□ -0.82
RPS28-204ENST00000602140 VCX3BQ9H321 246 aa9.93□□□□□ -0.82
RPS28-204ENST00000602140 FBXL7Q9UJT9 491 aa9.93□□□□□ -0.82
RPS28-204ENST00000602140 SPATA2Q9UM82 520 aa9.93□□□□□ -0.82
RPS28-204ENST00000602140 DMRT1Q9Y5R6 373 aa9.93□□□□□ -0.82
RPS28-204ENST00000602140 DPPA5A6NC42 116 aa9.92□□□□□ -0.82
RPS28-204ENST00000602140 NPIPB5A8MRT5 1133 aa9.92□□□□□ -0.82
RPS28-204ENST00000602140 NOTOA8MTQ0 251 aa9.92□□□□□ -0.82
RPS28-204ENST00000602140 OR11H12B2RN74 326 aa9.92□□□□□ -0.82
RPS28-204ENST00000602140 E7EUB6 86 aa9.92□□□□□ -0.82
RPS28-204ENST00000602140 KBTBD11O94819 623 aa9.92□□□□□ -0.82
RPS28-204ENST00000602140 IGHV3-23P01764 117 aa9.92□□□□□ -0.82
RPS28-204ENST00000602140 IL6RP08887 468 aaPredicted RBP9.92□□□□□ -0.82
RPS28-204ENST00000602140 KIR2DS2P43631 304 aa9.92□□□□□ -0.82
RPS28-204ENST00000602140 RPL27AP46776 148 aaKnown RBP9.92□□□□□ -0.82
RPS28-204ENST00000602140 HSPA13P48723 471 aa9.92□□□□□ -0.82
RPS28-204ENST00000602140 CNIH2Q6PI25 160 aa9.92□□□□□ -0.82
RPS28-204ENST00000602140 TMEM167AQ8TBQ9 72 aa9.92□□□□□ -0.82
RPS28-204ENST00000602140 GPHA2Q96T91 129 aa9.92□□□□□ -0.82
RPS28-204ENST00000602140 TAS2R8Q9NYW2 309 aa9.92□□□□□ -0.82
RPS28-204ENST00000602140 ANXA10Q9UJ72 324 aa9.92□□□□□ -0.82
RPS28-204ENST00000602140 S4R3C0 116 aa9.92□□□□□ -0.82
RPS28-204ENST00000602140 A0A1B0GW64 132 aa9.91□□□□□ -0.82
RPS28-204ENST00000602140 LGALS9O00182 355 aa9.91□□□□□ -0.82
RPS28-204ENST00000602140 SSX5O60225 188 aa9.91□□□□□ -0.82
RPS28-204ENST00000602140 NDUFB8O95169 186 aa9.91□□□□□ -0.82
RPS28-204ENST00000602140 BRWD1-AS2P59051 145 aa9.91□□□□□ -0.82
RPS28-204ENST00000602140 GNG2P59768 71 aa9.91□□□□□ -0.82
RPS28-204ENST00000602140 EIF4EBP1Q13541 118 aaPredicted RBP9.91□□□□□ -0.82
RPS28-204ENST00000602140 CLEC19AQ6UXS0 136 aa9.91□□□□□ -0.82
RPS28-204ENST00000602140 SSX9Q7RTT3 188 aa9.91□□□□□ -0.82
RPS28-204ENST00000602140 PUSL1Q8N0Z8 303 aaKnown RBP9.91□□□□□ -0.82
RPS28-204ENST00000602140 MFSD4AQ8N468 514 aa9.91□□□□□ -0.82
RPS28-204ENST00000602140 CACNG8Q8WXS5 425 aa9.91□□□□□ -0.82
RPS28-204ENST00000602140 WDR89Q96FK6 387 aaPredicted RBP9.91□□□□□ -0.82
RPS28-204ENST00000602140 CCDC140Q96MF4 163 aa9.91□□□□□ -0.82
RPS28-204ENST00000602140 FANCD2OSQ96PS1 177 aa9.91□□□□□ -0.82
RPS28-204ENST00000602140 SRD5A3Q9H8P0 318 aa9.91□□□□□ -0.82
RPS28-204ENST00000602140 ZC4H2Q9NQZ6 224 aa9.91□□□□□ -0.82
RPS28-204ENST00000602140 SLC2A9Q9NRM0 540 aa9.91□□□□□ -0.82
RPS28-204ENST00000602140 TXNL4BQ9NX01 149 aaKnown RBP9.91□□□□□ -0.82
RPS28-204ENST00000602140 TECRQ9NZ01 308 aaKnown RBP9.91□□□□□ -0.82
RPS28-204ENST00000602140 DAPK2Q9UIK4 370 aa9.91□□□□□ -0.82
RPS28-204ENST00000602140 SELENOKQ9Y6D0 94 aa9.91□□□□□ -0.82
RPS28-204ENST00000602140 EPPK1P58107 5090 aaKnown RBP9.9□□□□□ -0.82
RPS28-204ENST00000602140 SCGNO76038 276 aa9.9□□□□□ -0.82
RPS28-204ENST00000602140 JTBO76095 146 aa9.9□□□□□ -0.82
RPS28-204ENST00000602140 ZNF735P0CB33 412 aa9.9□□□□□ -0.82
RPS28-204ENST00000602140 AREGP15514 252 aa9.9□□□□□ -0.82
RPS28-204ENST00000602140 CBLN1P23435 193 aa9.9□□□□□ -0.82
RPS28-204ENST00000602140 FGF9P31371 208 aaPredicted RBP9.9□□□□□ -0.82
RPS28-204ENST00000602140 MAS1LP35410 378 aa9.9□□□□□ -0.82
RPS28-204ENST00000602140 ARL3P36405 182 aa9.9□□□□□ -0.82
RPS28-204ENST00000602140 ZNF66Q6ZN08 573 aa9.9□□□□□ -0.82
RPS28-204ENST00000602140 GPHB5Q86YW7 130 aa9.9□□□□□ -0.82
RPS28-204ENST00000602140 IL17DQ8TAD2 202 aa9.9□□□□□ -0.82
RPS28-204ENST00000602140 RRP15Q9Y3B9 282 aaKnown RBP9.9□□□□□ -0.82
RPS28-204ENST00000602140 ZNF320A2RRD8 509 aa9.89□□□□□ -0.83
RPS28-204ENST00000602140 DHFRP00374 187 aa9.89□□□□□ -0.83
RPS28-204ENST00000602140 HRASP01112 189 aa9.89□□□□□ -0.83
RPS28-204ENST00000602140 CRYGCP07315 174 aa9.89□□□□□ -0.83
RPS28-204ENST00000602140 MYOD1P15172 320 aa9.89□□□□□ -0.83
RPS28-204ENST00000602140 CTRB1P17538 263 aa9.89□□□□□ -0.83
RPS28-204ENST00000602140 PSMB9P28065 219 aa9.89□□□□□ -0.83
RPS28-204ENST00000602140 PSMB6P28072 239 aa9.89□□□□□ -0.83
RPS28-204ENST00000602140 RPL8P62917 257 aaKnown RBP9.89□□□□□ -0.83
RPS28-204ENST00000602140 UBE2UQ5VVX9 321 aa9.89□□□□□ -0.83
RPS28-204ENST00000602140 CTRB2Q6GPI1 263 aa9.89□□□□□ -0.83
RPS28-204ENST00000602140 TPRA1Q86W33 373 aa9.89□□□□□ -0.83
RPS28-204ENST00000602140 LGALS14Q8TCE9 139 aa9.89□□□□□ -0.83
RPS28-204ENST00000602140 EEF1AKMT3Q96AZ1 226 aa9.89□□□□□ -0.83
RPS28-204ENST00000602140 RAB26Q9ULW5 256 aa9.89□□□□□ -0.83
RPS28-204ENST00000602140 TMEM213A2RRL7 107 aa9.88□□□□□ -0.83
RPS28-204ENST00000602140 TNFSF12O43508 249 aa9.88□□□□□ -0.83
RPS28-204ENST00000602140 MRPS14O60783 128 aaKnown RBP9.88□□□□□ -0.83
RPS28-204ENST00000602140 REG1AP05451 166 aa9.88□□□□□ -0.83
RPS28-204ENST00000602140 PTHLHP12272 177 aa9.88□□□□□ -0.83
RPS28-204ENST00000602140 DEFA4P12838 97 aa9.88□□□□□ -0.83
RPS28-204ENST00000602140 HIST1H1BP16401 226 aaKnown RBP9.88□□□□□ -0.83
RPS28-204ENST00000602140 ARPC4P59998 168 aa9.88□□□□□ -0.83
RPS28-204ENST00000602140 GABARAPL2P60520 117 aa9.88□□□□□ -0.83
RPS28-204ENST00000602140 FAM106AQ4KMX7 169 aa9.88□□□□□ -0.83
RPS28-204ENST00000602140 ZNF57Q68EA5 555 aaPredicted RBP9.88□□□□□ -0.83
RPS28-204ENST00000602140 SFXN4Q6P4A7 337 aa9.88□□□□□ -0.83
RPS28-204ENST00000602140 SLC16A13Q7RTY0 426 aa9.88□□□□□ -0.83
RPS28-204ENST00000602140 TMEM61Q8N0U2 210 aa9.88□□□□□ -0.83
RPS28-204ENST00000602140 SPARTQ8N0X7 666 aa9.88□□□□□ -0.83
RPS28-204ENST00000602140 BEST4Q8NFU0 473 aa9.88□□□□□ -0.83
RPS28-204ENST00000602140 SECTM1Q8WVN6 248 aa9.88□□□□□ -0.83
RPS28-204ENST00000602140 CCL28Q9NRJ3 127 aa9.88□□□□□ -0.83
RPS28-204ENST00000602140 RHBDL2Q9NX52 303 aa9.88□□□□□ -0.83
RPS28-204ENST00000602140 MLXQ9UH92 298 aa9.88□□□□□ -0.83
RPS28-204ENST00000602140 SSR3Q9UNL2 185 aa9.88□□□□□ -0.83
RPS28-204ENST00000602140 MFSD2BA6NFX1 497 aa9.87□□□□□ -0.83
RPS28-204ENST00000602140 CGB1A6NKQ9 187 aa9.87□□□□□ -0.83
RPS28-204ENST00000602140 HLA-GP17693 338 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms