RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 KANTRA0A1W2PQU2 76 aa14.5□□□□□ -0.09
VRK3-225ENST00000601912 UPK2O00526 184 aa14.5□□□□□ -0.09
VRK3-225ENST00000601912 HKR1P10072 659 aa14.5□□□□□ -0.09
VRK3-225ENST00000601912 SAA4P35542 130 aa14.5□□□□□ -0.09
VRK3-225ENST00000601912 HABP2Q14520 560 aaPredicted RBP14.5□□□□□ -0.09
VRK3-225ENST00000601912 GPR157Q5UAW9 335 aa14.5□□□□□ -0.09
VRK3-225ENST00000601912 OR2C3Q8N628 320 aa14.5□□□□□ -0.09
VRK3-225ENST00000601912 MAPK1IP1LQ8NDC0 245 aa14.5□□□□□ -0.09
VRK3-225ENST00000601912 OR52E5Q8NH55 327 aa14.5□□□□□ -0.09
VRK3-225ENST00000601912 OR4A5Q8NH83 315 aa14.5□□□□□ -0.09
VRK3-225ENST00000601912 TSNAXQ99598 290 aaKnown RBP14.5□□□□□ -0.09
VRK3-225ENST00000601912 GON7Q9BXV9 100 aa14.5□□□□□ -0.09
VRK3-225ENST00000601912 FKBP11Q9NYL4 201 aa14.5□□□□□ -0.09
VRK3-225ENST00000601912 TRAV3A0A0B4J244 114 aa14.49□□□□□ -0.09
VRK3-225ENST00000601912 IGHV1-69DA0A0B4J2H0 117 aa14.49□□□□□ -0.09
VRK3-225ENST00000601912 C15orf61A6NNL5 157 aa14.49□□□□□ -0.09
VRK3-225ENST00000601912 J3QLI3 93 aa14.49□□□□□ -0.09
VRK3-225ENST00000601912 TGFAP01135 160 aa14.49□□□□□ -0.09
VRK3-225ENST00000601912 IGHV1-69P01742 117 aa14.49□□□□□ -0.09
VRK3-225ENST00000601912 IL6RP08887 468 aaPredicted RBP14.49□□□□□ -0.09
VRK3-225ENST00000601912 CAV2P51636 162 aa14.49□□□□□ -0.09
VRK3-225ENST00000601912 SPCS3P61009 180 aa14.49□□□□□ -0.09
VRK3-225ENST00000601912 TMEM249Q2WGJ8 235 aa14.49□□□□□ -0.09
VRK3-225ENST00000601912 PUSL1Q8N0Z8 303 aaKnown RBP14.49□□□□□ -0.09
VRK3-225ENST00000601912 FOXC2Q99958 501 aa14.49□□□□□ -0.09
VRK3-225ENST00000601912 SLC25A31Q9H0C2 315 aa14.49□□□□□ -0.09
VRK3-225ENST00000601912 RBKSQ9H477 322 aa14.49□□□□□ -0.09
VRK3-225ENST00000601912 C11orf1Q9H5F2 150 aa14.49□□□□□ -0.09
VRK3-225ENST00000601912 NUP50Q9UKX7 468 aa14.49□□□□□ -0.09
VRK3-225ENST00000601912 FOXA2Q9Y261 457 aaPredicted RBP14.49□□□□□ -0.09
VRK3-225ENST00000601912 WSB1Q9Y6I7 421 aa14.49□□□□□ -0.09
VRK3-225ENST00000601912 MSGN1A6NI15 193 aa14.49□□□□□ -0.09
VRK3-225ENST00000601912 CEBPZOSA8MTT3 80 aa14.49□□□□□ -0.09
VRK3-225ENST00000601912 KBTBD11O94819 623 aa14.49□□□□□ -0.09
VRK3-225ENST00000601912 TAS2R30P59541 319 aa14.49□□□□□ -0.09
VRK3-225ENST00000601912 CFHR4Q92496 578 aa14.49□□□□□ -0.09
VRK3-225ENST00000601912 SMIM8Q96KF7 97 aa14.49□□□□□ -0.09
VRK3-225ENST00000601912 CIB3Q96Q77 187 aaPredicted RBP14.49□□□□□ -0.09
VRK3-225ENST00000601912 LYRM2Q9NU23 88 aaPredicted RBP14.49□□□□□ -0.09
VRK3-225ENST00000601912 TMEM14BQ9NUH8 114 aa14.49□□□□□ -0.09
VRK3-225ENST00000601912 TRAV40A0A0B4J280 105 aa14.48□□□□□ -0.09
VRK3-225ENST00000601912 VENTXO95231 258 aa14.48□□□□□ -0.09
VRK3-225ENST00000601912 LY86O95711 162 aa14.48□□□□□ -0.09
VRK3-225ENST00000601912 IGLV2-23P01705 113 aa14.48□□□□□ -0.09
VRK3-225ENST00000601912 IGHV4-31P0DP07 118 aa14.48□□□□□ -0.09
VRK3-225ENST00000601912 IAPPP10997 89 aa14.48□□□□□ -0.09
VRK3-225ENST00000601912 TEX45Q8NA69 505 aa14.48□□□□□ -0.09
VRK3-225ENST00000601912 CLCC1Q96S66 551 aa14.48□□□□□ -0.09
VRK3-225ENST00000601912 SLA2Q9H6Q3 261 aa14.48□□□□□ -0.09
VRK3-225ENST00000601912 MAP1AP78559 2803 aaPredicted RBP14.47□□□□□ -0.09
VRK3-225ENST00000601912 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.47□□□□□ -0.091e-9■■■■■ 27.5
VRK3-225ENST00000601912 BCL2L11O43521 198 aa14.47□□□□□ -0.09
VRK3-225ENST00000601912 BRS3P32247 399 aa14.47□□□□□ -0.09
VRK3-225ENST00000601912 PAX9P55771 341 aa14.47□□□□□ -0.09
VRK3-225ENST00000601912 HSPE1P61604 102 aaKnown RBP14.47□□□□□ -0.09
VRK3-225ENST00000601912 PDLIM3Q53GG5 364 aaPredicted RBP14.47□□□□□ -0.09
VRK3-225ENST00000601912 DYNAPQ8N1N2 210 aa14.47□□□□□ -0.09
VRK3-225ENST00000601912 PIP4P2Q8N4L2 257 aa14.47□□□□□ -0.09
VRK3-225ENST00000601912 TMEM167AQ8TBQ9 72 aa14.47□□□□□ -0.09
VRK3-225ENST00000601912 DTD1Q8TEA8 209 aa14.47□□□□□ -0.09
VRK3-225ENST00000601912 C17orf50Q8WW18 174 aa14.47□□□□□ -0.09
VRK3-225ENST00000601912 RITA1Q96K30 269 aa14.47□□□□□ -0.09
VRK3-225ENST00000601912 ARPC5LQ9BPX5 153 aa14.47□□□□□ -0.09
VRK3-225ENST00000601912 PSENENQ9NZ42 101 aa14.47□□□□□ -0.09
VRK3-225ENST00000601912 ZNF257Q9Y2Q1 563 aa14.47□□□□□ -0.09
VRK3-225ENST00000601912 OR51B2Q9Y5P1 312 aa14.47□□□□□ -0.09
VRK3-225ENST00000601912 FAM24AA6NFZ4 105 aa14.46□□□□□ -0.09
VRK3-225ENST00000601912 SLC25A17O43808 307 aa14.46□□□□□ -0.09
VRK3-225ENST00000601912 TMEM50AO95807 157 aa14.46□□□□□ -0.09
VRK3-225ENST00000601912 MOSP00540 346 aa14.46□□□□□ -0.09
VRK3-225ENST00000601912 IGKV1D-33P01593 117 aa14.46□□□□□ -0.09
VRK3-225ENST00000601912 IGKV1-33P01594 117 aa14.46□□□□□ -0.09
VRK3-225ENST00000601912 FGF2P09038 288 aa14.46□□□□□ -0.09
VRK3-225ENST00000601912 RPL8P62917 257 aaKnown RBP14.46□□□□□ -0.09
VRK3-225ENST00000601912 HES1Q14469 280 aa14.46□□□□□ -0.09
VRK3-225ENST00000601912 WFDC11Q8NEX6 87 aa14.46□□□□□ -0.09
VRK3-225ENST00000601912 OR2T10Q8NGZ9 312 aa14.46□□□□□ -0.09
VRK3-225ENST00000601912 UNC79Q9P2D8 2635 aa14.46□□□□□ -0.09
VRK3-225ENST00000601912 IGHV3OR16-10A0A075B7F0 116 aa14.46□□□□□ -0.1
VRK3-225ENST00000601912 TAAR5O14804 337 aa14.46□□□□□ -0.1
VRK3-225ENST00000601912 PAX6P26367 422 aa14.46□□□□□ -0.1
VRK3-225ENST00000601912 CYB5R2Q6BCY4 276 aa14.46□□□□□ -0.1
VRK3-225ENST00000601912 TMEM252Q8N6L7 170 aa14.46□□□□□ -0.1
VRK3-225ENST00000601912 OR5B3Q8NH48 314 aa14.46□□□□□ -0.1
VRK3-225ENST00000601912 COMMD5Q9GZQ3 224 aa14.46□□□□□ -0.1
VRK3-225ENST00000601912 TCF19Q9Y242 345 aa14.46□□□□□ -0.1
VRK3-225ENST00000601912 VPS13CQ709C8 3753 aa14.45□□□□□ -0.1
VRK3-225ENST00000601912 SPDEFO95238 335 aa14.45□□□□□ -0.1
VRK3-225ENST00000601912 SNRNP70P08621 437 aaKnown RBP14.45□□□□□ -0.1
VRK3-225ENST00000601912 FAM106CPP0CH98 169 aa14.45□□□□□ -0.1
VRK3-225ENST00000601912 EWSR1Q01844 656 aaKnown RBP eCLIP14.45□□□□□ -0.1
VRK3-225ENST00000601912 BAXQ07812 192 aa14.45□□□□□ -0.1
VRK3-225ENST00000601912 PSG5Q15238 335 aa14.45□□□□□ -0.1
VRK3-225ENST00000601912 SPINK9Q5DT21 86 aa14.45□□□□□ -0.1
VRK3-225ENST00000601912 RUSC1-AS1Q66K80 236 aa14.45□□□□□ -0.1
VRK3-225ENST00000601912 SLC51BQ86UW2 128 aa14.45□□□□□ -0.1
VRK3-225ENST00000601912 STX12Q86Y82 276 aa14.45□□□□□ -0.1
VRK3-225ENST00000601912 ZDHHC16Q969W1 377 aa14.45□□□□□ -0.1
VRK3-225ENST00000601912 AJUBAQ96IF1 538 aa14.45□□□□□ -0.1
VRK3-225ENST00000601912 HIPK2Q9H2X6 1198 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms