RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 EDARADDQ8WWZ3 215 aa9.6□□□□□ -0.87
VRK3-223ENST00000601341 TVP23CQ96ET8 276 aa9.6□□□□□ -0.87
VRK3-223ENST00000601341 ABHD14AQ9BUJ0 271 aa9.6□□□□□ -0.87
VRK3-223ENST00000601341 PATZ1Q9HBE1 687 aaKnown RBP9.6□□□□□ -0.87
VRK3-223ENST00000601341 CALYQ9NYX4 217 aa9.6□□□□□ -0.87
VRK3-223ENST00000601341 CLN8Q9UBY8 286 aa9.6□□□□□ -0.87
VRK3-223ENST00000601341 SPG11Q96JI7 2443 aa9.59□□□□□ -0.87
VRK3-223ENST00000601341 ZNF729A6NN14 1252 aaPredicted RBP9.59□□□□□ -0.87
VRK3-223ENST00000601341 F2RL2O00254 374 aa9.59□□□□□ -0.87
VRK3-223ENST00000601341 IFNA1P01562 189 aa9.59□□□□□ -0.87
VRK3-223ENST00000601341 S100A6P06703 90 aa9.59□□□□□ -0.87
VRK3-223ENST00000601341 BCL2P10415 239 aa9.59□□□□□ -0.87
VRK3-223ENST00000601341 PAX1P15863 534 aa9.59□□□□□ -0.87
VRK3-223ENST00000601341 TMEM267Q0VDI3 215 aaPredicted RBP9.59□□□□□ -0.87
VRK3-223ENST00000601341 TMEM200BQ69YZ2 307 aa9.59□□□□□ -0.87
VRK3-223ENST00000601341 ETV3LQ6ZN32 361 aa9.59□□□□□ -0.87
VRK3-223ENST00000601341 OR2D2Q9H210 308 aa9.59□□□□□ -0.87
VRK3-223ENST00000601341 GAL3ST2Q9H3Q3 398 aa9.59□□□□□ -0.87
VRK3-223ENST00000601341 LINC00574Q9H8X3 128 aa9.59□□□□□ -0.87
VRK3-223ENST00000601341 RPRMQ9NS64 109 aa9.59□□□□□ -0.87
VRK3-223ENST00000601341 NDUFS8O00217 210 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 ITGB1BP1O14713 200 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 OR2C1O95371 312 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 IFNA17P01571 189 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 METTL15P1P0C7V9 234 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 ZNF16P17020 682 aaPredicted RBP9.58□□□□□ -0.88
VRK3-223ENST00000601341 C17orf58Q2M2W7 97 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 VWC2Q2TAL6 325 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 TMEM30BQ3MIR4 351 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 WDR25Q64LD2 544 aaPredicted RBP9.58□□□□□ -0.88
VRK3-223ENST00000601341 HEPN1Q6WQI6 88 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 TCF23Q7RTU1 214 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 HAPLN4Q86UW8 402 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 ZNF429Q86V71 674 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 OR52L2PQ8NGH6 319 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 NRGNQ92686 78 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 TAF15Q92804 592 aaKnown RBP eCLIP9.58□□□□□ -0.88
VRK3-223ENST00000601341 GNG12Q9UBI6 72 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 JPT1Q9UK76 154 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 PUS1Q9Y606 427 aaKnown RBP eCLIP9.58□□□□□ -0.88
VRK3-223ENST00000601341 CRYBG3Q68DQ2 2970 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 A0A1W2PPH5 198 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 H3BP45 60 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 RBFOX2O43251 390 aaKnown RBP eCLIP9.58□□□□□ -0.88
VRK3-223ENST00000601341 TGOLN2O43493 480 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 SMIM6P0DI80 62 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 SLC38A11Q08AI6 406 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 ARL16Q0P5N6 197 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 HAGHQ16775 308 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 CLEC2AQ6UVW9 174 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 RBMS3Q6XE24 437 aaKnown RBP9.58□□□□□ -0.88
VRK3-223ENST00000601341 CYB561D1Q8N8Q1 229 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 OR10A7Q8NGE5 316 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 FAM168AQ92567 244 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 RAB39BQ96DA2 213 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 RCC1LQ96I51 464 aaKnown RBP9.58□□□□□ -0.88
VRK3-223ENST00000601341 ZNF714Q96N38 554 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 TMEM147Q9BVK8 224 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 BPESC1Q9GZL8 116 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 VAX2Q9UIW0 290 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 GAB2Q9UQC2 676 aa9.58□□□□□ -0.88
VRK3-223ENST00000601341 DOPEY2Q9Y3R5 2298 aa9.57□□□□□ -0.88
VRK3-223ENST00000601341 KIAA2026Q5HYC2 2103 aa9.57□□□□□ -0.88
VRK3-223ENST00000601341 TACC2O95359 2948 aa9.57□□□□□ -0.88
VRK3-223ENST00000601341 YPEL1O60688 119 aa9.57□□□□□ -0.88
VRK3-223ENST00000601341 NXPH3O95157 252 aa9.57□□□□□ -0.88
VRK3-223ENST00000601341 IGHV2-5P01817 119 aa9.57□□□□□ -0.88
VRK3-223ENST00000601341 IAPPP10997 89 aa9.57□□□□□ -0.88
VRK3-223ENST00000601341 AKR1C3P42330 323 aa9.57□□□□□ -0.88
VRK3-223ENST00000601341 MEOX2P50222 304 aa9.57□□□□□ -0.88
VRK3-223ENST00000601341 AKR1D1P51857 326 aa9.57□□□□□ -0.88
VRK3-223ENST00000601341 LOXL3P58215 753 aa9.57□□□□□ -0.88
VRK3-223ENST00000601341 GNB2P62879 340 aa9.57□□□□□ -0.88
VRK3-223ENST00000601341 LTC4SQ16873 150 aa9.57□□□□□ -0.88
VRK3-223ENST00000601341 PDLIM3Q53GG5 364 aaPredicted RBP9.57□□□□□ -0.88
VRK3-223ENST00000601341 AKIRIN2Q53H80 203 aa9.57□□□□□ -0.88
VRK3-223ENST00000601341 SPANXN5Q5MJ07 72 aa9.57□□□□□ -0.88
VRK3-223ENST00000601341 FAM24BQ8N5W8 94 aa9.57□□□□□ -0.88
VRK3-223ENST00000601341 OR13D1Q8NGV5 346 aa9.57□□□□□ -0.88
VRK3-223ENST00000601341 PERPQ96FX8 193 aa9.57□□□□□ -0.88
VRK3-223ENST00000601341 YPEL2Q96QA6 119 aa9.57□□□□□ -0.88
VRK3-223ENST00000601341 OR4C12Q96R67 309 aa9.57□□□□□ -0.88
VRK3-223ENST00000601341 AGMATQ9BSE5 352 aa9.57□□□□□ -0.88
VRK3-223ENST00000601341 PIMREGQ9BSJ6 248 aa9.57□□□□□ -0.88
VRK3-223ENST00000601341 RSG1Q9BU20 258 aa9.57□□□□□ -0.88
VRK3-223ENST00000601341 RBKSQ9H477 322 aa9.57□□□□□ -0.88
VRK3-223ENST00000601341 RFNGQ9Y644 331 aa9.57□□□□□ -0.88
VRK3-223ENST00000601341 PTPN13Q12923 2485 aa9.57□□□□□ -0.88
VRK3-223ENST00000601341 IGHV3-43A0A0B4J1X8 118 aa9.56□□□□□ -0.88
VRK3-223ENST00000601341 IGHV3-43DP0DP04 118 aa9.56□□□□□ -0.88
VRK3-223ENST00000601341 DSCR9P59020 149 aa9.56□□□□□ -0.88
VRK3-223ENST00000601341 KRTAP10-9P60411 292 aa9.56□□□□□ -0.88
VRK3-223ENST00000601341 DLK1P80370 383 aa9.56□□□□□ -0.88
VRK3-223ENST00000601341 IZUMO4Q1ZYL8 232 aa9.56□□□□□ -0.88
VRK3-223ENST00000601341 TMEM249Q2WGJ8 235 aa9.56□□□□□ -0.88
VRK3-223ENST00000601341 MORN2Q502X0 79 aa9.56□□□□□ -0.88
VRK3-223ENST00000601341 OR10P1Q8NGE3 313 aa9.56□□□□□ -0.88
VRK3-223ENST00000601341 C8orf46Q8TAG6 207 aa9.56□□□□□ -0.88
VRK3-223ENST00000601341 ISOC2Q96AB3 205 aa9.56□□□□□ -0.88
VRK3-223ENST00000601341 C12orf57Q99622 126 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms