RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 MRPL27Q9P0M9 148 aaKnown RBP12.41□□□□□ -0.42
USE1-208ENST00000600970 KLK9Q9UKQ9 250 aa12.41□□□□□ -0.42
USE1-208ENST00000600970 GNAO1P09471 354 aa12.4□□□□□ -0.42
USE1-208ENST00000600970 AREGP15514 252 aa12.4□□□□□ -0.42
USE1-208ENST00000600970 CTRB1P17538 263 aa12.4□□□□□ -0.42
USE1-208ENST00000600970 PSMB6P28072 239 aa12.4□□□□□ -0.42
USE1-208ENST00000600970 RPL30P62888 115 aaKnown RBP12.4□□□□□ -0.42
USE1-208ENST00000600970 PRR20EP86478 221 aa12.4□□□□□ -0.42
USE1-208ENST00000600970 PRR20CP86479 221 aa12.4□□□□□ -0.42
USE1-208ENST00000600970 PRR20DP86480 221 aa12.4□□□□□ -0.42
USE1-208ENST00000600970 PRR20BP86481 221 aa12.4□□□□□ -0.42
USE1-208ENST00000600970 PRR20AP86496 221 aa12.4□□□□□ -0.42
USE1-208ENST00000600970 OR2B11Q5JQS5 317 aa12.4□□□□□ -0.42
USE1-208ENST00000600970 CTRB2Q6GPI1 263 aa12.4□□□□□ -0.42
USE1-208ENST00000600970 TMEM91Q6ZNR0 172 aa12.4□□□□□ -0.42
USE1-208ENST00000600970 KCTD9Q7L273 389 aa12.4□□□□□ -0.42
USE1-208ENST00000600970 STPG3Q8N7X2 389 aa12.4□□□□□ -0.42
USE1-208ENST00000600970 TMEM203Q969S6 136 aa12.4□□□□□ -0.42
USE1-208ENST00000600970 RAB3CQ96E17 227 aa12.4□□□□□ -0.42
USE1-208ENST00000600970 LSM2Q9Y333 95 aaKnown RBP12.4□□□□□ -0.42
USE1-208ENST00000600970 TRBV7-1A0A0A6YYK4 115 aa12.39□□□□□ -0.43
USE1-208ENST00000600970 TMEM272A0A1B0GTI8 110 aa12.39□□□□□ -0.43
USE1-208ENST00000600970 MFSD2BA6NFX1 497 aa12.39□□□□□ -0.43
USE1-208ENST00000600970 J3QRK9 145 aa12.39□□□□□ -0.43
USE1-208ENST00000600970 KBTBD11O94819 623 aa12.39□□□□□ -0.43
USE1-208ENST00000600970 CLEC3BP05452 202 aa12.39□□□□□ -0.43
USE1-208ENST00000600970 GNB3P16520 340 aa12.39□□□□□ -0.43
USE1-208ENST00000600970 GALP22466 123 aa12.39□□□□□ -0.43
USE1-208ENST00000600970 ARFRP1Q13795 201 aa12.39□□□□□ -0.43
USE1-208ENST00000600970 SPHARQ15513 63 aa12.39□□□□□ -0.43
USE1-208ENST00000600970 C8orf59Q8N0T1 100 aaPredicted RBP12.39□□□□□ -0.43
USE1-208ENST00000600970 PUSL1Q8N0Z8 303 aaKnown RBP12.39□□□□□ -0.43
USE1-208ENST00000600970 ZNF645Q8N7E2 425 aa12.39□□□□□ -0.43
USE1-208ENST00000600970 TMEM167AQ8TBQ9 72 aa12.39□□□□□ -0.43
USE1-208ENST00000600970 FBLIM1Q8WUP2 373 aa12.39□□□□□ -0.43
USE1-208ENST00000600970 OR2A7Q96R45 310 aa12.39□□□□□ -0.43
USE1-208ENST00000600970 SPAG8Q99932 426 aaPredicted RBP12.39□□□□□ -0.43
USE1-208ENST00000600970 C5orf66Q9H5L9 145 aa12.39□□□□□ -0.43
USE1-208ENST00000600970 RAB22AQ9UL26 194 aa12.39□□□□□ -0.43
USE1-208ENST00000600970 PRELID3BQ9Y3B1 194 aa12.39□□□□□ -0.43
USE1-208ENST00000600970 DNAH6Q9C0G6 4158 aa12.39□□□□□ -0.43
USE1-208ENST00000600970 MFNGO00587 321 aa12.38□□□□□ -0.43
USE1-208ENST00000600970 DHFRP00374 187 aa12.38□□□□□ -0.43
USE1-208ENST00000600970 HIST1H1BP16401 226 aaKnown RBP12.38□□□□□ -0.43
USE1-208ENST00000600970 RPL35AP18077 110 aaKnown RBP12.38□□□□□ -0.43
USE1-208ENST00000600970 MAS1LP35410 378 aa12.38□□□□□ -0.43
USE1-208ENST00000600970 ELLP55199 621 aaPredicted RBP12.38□□□□□ -0.43
USE1-208ENST00000600970 ODF3L2Q3SX64 289 aa12.38□□□□□ -0.43
USE1-208ENST00000600970 VSTM2AQ8TAG5 236 aa12.38□□□□□ -0.43
USE1-208ENST00000600970 MRPS7Q9Y2R9 242 aaKnown RBP12.38□□□□□ -0.43
USE1-208ENST00000600970 UFC1Q9Y3C8 167 aa12.38□□□□□ -0.43
USE1-208ENST00000600970 IGLV11-55A0A075B6I3 123 aa12.37□□□□□ -0.43
USE1-208ENST00000600970 IGKV1D-8A0A087WSZ0 117 aa12.37□□□□□ -0.43
USE1-208ENST00000600970 IGHV3-35A0A0C4DH35 117 aa12.37□□□□□ -0.43
USE1-208ENST00000600970 TSPAN4O14817 238 aa12.37□□□□□ -0.43
USE1-208ENST00000600970 S1PR2O95136 353 aa12.37□□□□□ -0.43
USE1-208ENST00000600970 REG1AP05451 166 aa12.37□□□□□ -0.43
USE1-208ENST00000600970 MYOD1P15172 320 aa12.37□□□□□ -0.43
USE1-208ENST00000600970 FCGR2BP31994 310 aaPredicted RBP12.37□□□□□ -0.43
USE1-208ENST00000600970 MED22Q15528 200 aa12.37□□□□□ -0.43
USE1-208ENST00000600970 LIPKQ5VXJ0 399 aa12.37□□□□□ -0.43
USE1-208ENST00000600970 Q6ZS49 121 aa12.37□□□□□ -0.43
USE1-208ENST00000600970 OR10R2Q8NGX6 335 aa12.37□□□□□ -0.43
USE1-208ENST00000600970 CXorf58Q96LI9 332 aa12.37□□□□□ -0.43
USE1-208ENST00000600970 MAP6D1Q9H9H5 199 aa12.37□□□□□ -0.43
USE1-208ENST00000600970 RBMX2Q9Y388 322 aaKnown RBP12.37□□□□□ -0.43
USE1-208ENST00000600970 RYR1P21817 5038 aa12.37□□□□□ -0.43
USE1-208ENST00000600970 A0A075B6Q4 140 aa12.36□□□□□ -0.43
USE1-208ENST00000600970 IGLV2-14P01704 120 aa12.36□□□□□ -0.43
USE1-208ENST00000600970 DEFA4P12838 97 aa12.36□□□□□ -0.43
USE1-208ENST00000600970 GPR183P32249 361 aa12.36□□□□□ -0.43
USE1-208ENST00000600970 PSMD7P51665 324 aa12.36□□□□□ -0.43
USE1-208ENST00000600970 HES5Q5TA89 166 aa12.36□□□□□ -0.43
USE1-208ENST00000600970 PACRGLQ8N7B6 248 aa12.36□□□□□ -0.43
USE1-208ENST00000600970 OR4S2Q8NH73 311 aa12.36□□□□□ -0.43
USE1-208ENST00000600970 ZNF502Q8TBZ5 544 aa12.36□□□□□ -0.43
USE1-208ENST00000600970 UFD1Q92890 307 aa12.36□□□□□ -0.43
USE1-208ENST00000600970 GALNT14Q96FL9 552 aa12.36□□□□□ -0.43
USE1-208ENST00000600970 CENPOQ9BU64 300 aa12.36□□□□□ -0.43
USE1-208ENST00000600970 ZNF436Q9C0F3 470 aaPredicted RBP12.36□□□□□ -0.43
USE1-208ENST00000600970 V9GY05 133 aa12.36□□□□□ -0.43
USE1-208ENST00000600970 CGB1A6NKQ9 187 aa12.35□□□□□ -0.43
USE1-208ENST00000600970 RAB27BO00194 218 aa12.35□□□□□ -0.43
USE1-208ENST00000600970 ARL6IP5O75915 188 aa12.35□□□□□ -0.43
USE1-208ENST00000600970 HLA-DQB1P01920 261 aa12.35□□□□□ -0.43
USE1-208ENST00000600970 HIST1H1DP16402 221 aaKnown RBP12.35□□□□□ -0.43
USE1-208ENST00000600970 CD36P16671 472 aa12.35□□□□□ -0.43
USE1-208ENST00000600970 CRHBPP24387 322 aa12.35□□□□□ -0.43
USE1-208ENST00000600970 GADD45AP24522 165 aa12.35□□□□□ -0.43
USE1-208ENST00000600970 BRWD1-AS2P59051 145 aa12.35□□□□□ -0.43
USE1-208ENST00000600970 NANOS2P60321 138 aaKnown RBP12.35□□□□□ -0.43
USE1-208ENST00000600970 RPS25P62851 125 aaKnown RBP12.35□□□□□ -0.43
USE1-208ENST00000600970 PLET1Q6UQ28 207 aa12.35□□□□□ -0.43
USE1-208ENST00000600970 C8orf4Q9NR00 106 aa12.35□□□□□ -0.43
USE1-208ENST00000600970 FBXL17Q9UF56 701 aa12.35□□□□□ -0.43
USE1-208ENST00000600970 OR2W1Q9Y3N9 320 aa12.35□□□□□ -0.43
USE1-208ENST00000600970 NFYAP23511 347 aaPredicted RBP12.34□□□□□ -0.43
USE1-208ENST00000600970 CALRP27797 417 aaKnown RBP12.34□□□□□ -0.43
USE1-208ENST00000600970 TALDO1P37837 337 aa12.34□□□□□ -0.43
USE1-208ENST00000600970 RANBP1P43487 201 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms