RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, human

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-223	ENST00000600523	SNAPC5	O75971	98 aa		10.22	□□□□□ -0.77
SRRM1-223	ENST00000600523	CTSD	P07339	412 aa	Predicted RBP	10.22	□□□□□ -0.77
SRRM1-223	ENST00000600523	RPA2	P15927	270 aa		10.22	□□□□□ -0.77
SRRM1-223	ENST00000600523	LPAR6	P43657	344 aa		10.22	□□□□□ -0.77
SRRM1-223	ENST00000600523	CRIP2	P52943	208 aa	Predicted RBP	10.22	□□□□□ -0.77
SRRM1-223	ENST00000600523	RND3	P61587	244 aa		10.22	□□□□□ -0.77
SRRM1-223	ENST00000600523	RPL8	P62917	257 aa	Known RBP	10.22	□□□□□ -0.77
SRRM1-223	ENST00000600523	PJVK	Q0ZLH3	352 aa		10.22	□□□□□ -0.77
SRRM1-223	ENST00000600523	ZNF79	Q15937	498 aa		10.22	□□□□□ -0.77
SRRM1-223	ENST00000600523	FAAP20	Q6NZ36	180 aa		10.22	□□□□□ -0.77
SRRM1-223	ENST00000600523	TREML4	Q6UXN2	200 aa		10.22	□□□□□ -0.77
SRRM1-223	ENST00000600523	VKORC1L1	Q8N0U8	176 aa		10.22	□□□□□ -0.77
SRRM1-223	ENST00000600523	LFNG	Q8NES3	379 aa		10.22	□□□□□ -0.77
SRRM1-223	ENST00000600523	OR13C8	Q8NGS7	320 aa		10.22	□□□□□ -0.77
SRRM1-223	ENST00000600523	TMEM167A	Q8TBQ9	72 aa		10.22	□□□□□ -0.77
SRRM1-223	ENST00000600523	MARCH1	Q8TCQ1	289 aa		10.22	□□□□□ -0.77
SRRM1-223	ENST00000600523	TSC22D3	Q99576	134 aa		10.22	□□□□□ -0.77
SRRM1-223	ENST00000600523	SLA2	Q9H6Q3	261 aa		10.22	□□□□□ -0.77
SRRM1-223	ENST00000600523	ZNF430	Q9H8G1	570 aa	Predicted RBP	10.22	□□□□□ -0.77
SRRM1-223	ENST00000600523	TPSG1	Q9NRR2	321 aa		10.22	□□□□□ -0.77
SRRM1-223	ENST00000600523	ZNF355P	Q9NSJ1	428 aa		10.22	□□□□□ -0.77
SRRM1-223	ENST00000600523	SLC2A8	Q9NY64	477 aa		10.22	□□□□□ -0.77
SRRM1-223	ENST00000600523	BET1L	Q9NYM9	111 aa		10.22	□□□□□ -0.77
SRRM1-223	ENST00000600523	TENM1	Q9UKZ4	2725 aa		10.21	□□□□□ -0.77
SRRM1-223	ENST00000600523	PIGBOS1	A0A0B4J2F0	54 aa		10.21	□□□□□ -0.77
SRRM1-223	ENST00000600523	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	10.21	□□□□□ -0.77
SRRM1-223	ENST00000600523	MARCH11	A6NNE9	402 aa		10.21	□□□□□ -0.77
SRRM1-223	ENST00000600523		H0Y980	276 aa		10.21	□□□□□ -0.77
SRRM1-223	ENST00000600523	S1PR2	O95136	353 aa		10.21	□□□□□ -0.77
SRRM1-223	ENST00000600523	KRAS	P01116	189 aa		10.21	□□□□□ -0.77
SRRM1-223	ENST00000600523	PF4	P02776	101 aa		10.21	□□□□□ -0.77
SRRM1-223	ENST00000600523	ZNF735	P0CB33	412 aa		10.21	□□□□□ -0.77
SRRM1-223	ENST00000600523	RPL23A	P62750	156 aa	Known RBP	10.21	□□□□□ -0.77
SRRM1-223	ENST00000600523	POU2AF1	Q16633	256 aa		10.21	□□□□□ -0.77
SRRM1-223	ENST00000600523	CNPY1	Q3B7I2	92 aa		10.21	□□□□□ -0.77
SRRM1-223	ENST00000600523	OR4A47	Q6IF82	309 aa		10.21	□□□□□ -0.77
SRRM1-223	ENST00000600523	C10orf99	Q6UWK7	81 aa		10.21	□□□□□ -0.77
SRRM1-223	ENST00000600523	SLC25A42	Q86VD7	318 aa		10.21	□□□□□ -0.77
SRRM1-223	ENST00000600523	ZNF695	Q8IW36	515 aa		10.21	□□□□□ -0.77
SRRM1-223	ENST00000600523	MINDY2	Q8NBR6	621 aa		10.21	□□□□□ -0.77
SRRM1-223	ENST00000600523	FAM110D	Q8TAY7	271 aa	Predicted RBP	10.21	□□□□□ -0.77
SRRM1-223	ENST00000600523	SRSF12	Q8WXF0	261 aa	Known RBP	10.21	□□□□□ -0.77
SRRM1-223	ENST00000600523	S100Z	Q8WXG8	99 aa		10.21	□□□□□ -0.77
SRRM1-223	ENST00000600523	FAM103A1	Q9BTL3	118 aa	Known RBP	10.21	□□□□□ -0.77
SRRM1-223	ENST00000600523	COMMD5	Q9GZQ3	224 aa		10.21	□□□□□ -0.77
SRRM1-223	ENST00000600523	SRR	Q9GZT4	340 aa		10.21	□□□□□ -0.77
SRRM1-223	ENST00000600523	KCNIP3	Q9Y2W7	256 aa		10.21	□□□□□ -0.77
SRRM1-223	ENST00000600523	NUBP2	Q9Y5Y2	271 aa		10.21	□□□□□ -0.77
SRRM1-223	ENST00000600523	C3orf85	A0A1B0GTC6	90 aa		10.2	□□□□□ -0.78
SRRM1-223	ENST00000600523	NAP1L6	A6NFF2	107 aa		10.2	□□□□□ -0.78
SRRM1-223	ENST00000600523	MSGN1	A6NI15	193 aa		10.2	□□□□□ -0.78
SRRM1-223	ENST00000600523		H3BUA1	57 aa		10.2	□□□□□ -0.78
SRRM1-223	ENST00000600523	DHFR	P00374	187 aa		10.2	□□□□□ -0.78
SRRM1-223	ENST00000600523	FGF2	P09038	288 aa		10.2	□□□□□ -0.78
SRRM1-223	ENST00000600523	HLA-G	P17693	338 aa		10.2	□□□□□ -0.78
SRRM1-223	ENST00000600523	PI3	P19957	117 aa		10.2	□□□□□ -0.78
SRRM1-223	ENST00000600523	RPL27A	P46776	148 aa	Known RBP	10.2	□□□□□ -0.78
SRRM1-223	ENST00000600523	CDX1	P47902	265 aa	Predicted RBP	10.2	□□□□□ -0.78
SRRM1-223	ENST00000600523	BRWD1-AS2	P59051	145 aa		10.2	□□□□□ -0.78
SRRM1-223	ENST00000600523	NDP	Q00604	133 aa		10.2	□□□□□ -0.78
SRRM1-223	ENST00000600523	CFHR3	Q02985	330 aa		10.2	□□□□□ -0.78
SRRM1-223	ENST00000600523	KLF9	Q13886	244 aa	Predicted RBP	10.2	□□□□□ -0.78
SRRM1-223	ENST00000600523	TRIM16L	Q309B1	348 aa		10.2	□□□□□ -0.78
SRRM1-223	ENST00000600523	TCTEX1D4	Q5JR98	221 aa		10.2	□□□□□ -0.78
SRRM1-223	ENST00000600523	H2BFWT	Q7Z2G1	175 aa		10.2	□□□□□ -0.78
SRRM1-223	ENST00000600523	SGPP2	Q8IWX5	399 aa		10.2	□□□□□ -0.78
SRRM1-223	ENST00000600523	PUSL1	Q8N0Z8	303 aa	Known RBP	10.2	□□□□□ -0.78
SRRM1-223	ENST00000600523	RNF152	Q8N8N0	203 aa		10.2	□□□□□ -0.78
SRRM1-223	ENST00000600523	KLHL30-AS1	Q8NEE0	82 aa		10.2	□□□□□ -0.78
SRRM1-223	ENST00000600523	RNASE11	Q8TAA1	199 aa	Known RBP	10.2	□□□□□ -0.78
SRRM1-223	ENST00000600523	TRIM63	Q969Q1	353 aa		10.2	□□□□□ -0.78
SRRM1-223	ENST00000600523	TMEM140	Q9NV12	185 aa		10.2	□□□□□ -0.78
SRRM1-223	ENST00000600523	FKBP11	Q9NYL4	201 aa		10.2	□□□□□ -0.78
SRRM1-223	ENST00000600523	PTTG2	Q9NZH5	202 aa		10.2	□□□□□ -0.78
SRRM1-223	ENST00000600523	ARPC1B	O15143	372 aa	Known RBP	10.19	□□□□□ -0.78
SRRM1-223	ENST00000600523	CYB5B	O43169	146 aa		10.19	□□□□□ -0.78
SRRM1-223	ENST00000600523	RBMXL2	O75526	392 aa	Known RBP	10.19	□□□□□ -0.78
SRRM1-223	ENST00000600523	TSPAN15	O95858	294 aa		10.19	□□□□□ -0.78
SRRM1-223	ENST00000600523	IGLV1-40	P01703	118 aa		10.19	□□□□□ -0.78
SRRM1-223	ENST00000600523	RPLP1	P05386	114 aa	Known RBP	10.19	□□□□□ -0.78
SRRM1-223	ENST00000600523	ANXA3	P12429	323 aa		10.19	□□□□□ -0.78
SRRM1-223	ENST00000600523	PSMB8	P28062	276 aa		10.19	□□□□□ -0.78
SRRM1-223	ENST00000600523	PPIF	P30405	207 aa	Known RBP	10.19	□□□□□ -0.78
SRRM1-223	ENST00000600523	RAB9A	P51151	201 aa		10.19	□□□□□ -0.78
SRRM1-223	ENST00000600523	AKR1C2	P52895	323 aa		10.19	□□□□□ -0.78
SRRM1-223	ENST00000600523	THOC7	Q6I9Y2	204 aa	Known RBP	10.19	□□□□□ -0.78
SRRM1-223	ENST00000600523	MRPL41	Q8IXM3	137 aa	Known RBP	10.19	□□□□□ -0.78
SRRM1-223	ENST00000600523	CADM3	Q8N126	398 aa		10.19	□□□□□ -0.78
SRRM1-223	ENST00000600523	UBE2E2	Q96LR5	201 aa		10.19	□□□□□ -0.78
SRRM1-223	ENST00000600523	FYTTD1	Q96QD9	318 aa	Known RBP	10.19	□□□□□ -0.78
SRRM1-223	ENST00000600523	SLC25A21	Q9BQT8	299 aa	Predicted RBP	10.19	□□□□□ -0.78
SRRM1-223	ENST00000600523	C7orf50	Q9BRJ6	194 aa	Known RBP	10.19	□□□□□ -0.78
SRRM1-223	ENST00000600523	COA4	Q9NYJ1	87 aa		10.19	□□□□□ -0.78
SRRM1-223	ENST00000600523	PRND	Q9UKY0	176 aa		10.19	□□□□□ -0.78
SRRM1-223	ENST00000600523	VSIG4	Q9Y279	399 aa		10.19	□□□□□ -0.78
SRRM1-223	ENST00000600523	FBXO7	Q9Y3I1	522 aa		10.19	□□□□□ -0.78
SRRM1-223	ENST00000600523		A0A0G2JLM5	398 aa		10.18	□□□□□ -0.78
SRRM1-223	ENST00000600523	UPK2	O00526	184 aa		10.18	□□□□□ -0.78
SRRM1-223	ENST00000600523	TRGV3	P03979	118 aa		10.18	□□□□□ -0.78
SRRM1-223	ENST00000600523	OR9G9	P0C7N8	305 aa		10.18	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms