RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 SUN5Q8TC36 379 aa12.3□□□□□ -0.44
HIF3A-218ENST00000600383 NRGNQ92686 78 aa12.3□□□□□ -0.44
HIF3A-218ENST00000600383 CLCC1Q96S66 551 aa12.3□□□□□ -0.44
HIF3A-218ENST00000600383 HIPK2Q9H2X6 1198 aa12.3□□□□□ -0.44
HIF3A-218ENST00000600383 TNCP24821 2201 aa12.3□□□□□ -0.44
HIF3A-218ENST00000600383 A0A1W2PRD5 423 aa12.29□□□□□ -0.44
HIF3A-218ENST00000600383 A0A1W2PRF3 423 aa12.29□□□□□ -0.44
HIF3A-218ENST00000600383 A0A1W2PRM7 423 aa12.29□□□□□ -0.44
HIF3A-218ENST00000600383 IFNA10P01566 189 aa12.29□□□□□ -0.44
HIF3A-218ENST00000600383 PRH1P02810 166 aa12.29□□□□□ -0.44
HIF3A-218ENST00000600383 HOXA1P49639 335 aaPredicted RBP12.29□□□□□ -0.44
HIF3A-218ENST00000600383 SULT1A2P50226 295 aa12.29□□□□□ -0.44
HIF3A-218ENST00000600383 ZNF137PP52743 207 aa12.29□□□□□ -0.44
HIF3A-218ENST00000600383 FAM71F2Q6NXP2 309 aa12.29□□□□□ -0.44
HIF3A-218ENST00000600383 MOB3BQ86TA1 216 aa12.29□□□□□ -0.44
HIF3A-218ENST00000600383 ZNF429Q86V71 674 aa12.29□□□□□ -0.44
HIF3A-218ENST00000600383 OR2G3Q8NGZ4 309 aa12.29□□□□□ -0.44
HIF3A-218ENST00000600383 TSNAXQ99598 290 aaKnown RBP12.29□□□□□ -0.44
HIF3A-218ENST00000600383 AIFM2Q9BRQ8 373 aa12.29□□□□□ -0.44
HIF3A-218ENST00000600383 REG4Q9BYZ8 158 aa12.29□□□□□ -0.44
HIF3A-218ENST00000600383 HRH4Q9H3N8 390 aa12.29□□□□□ -0.44
HIF3A-218ENST00000600383 TCF19Q9Y242 345 aa12.29□□□□□ -0.44
HIF3A-218ENST00000600383 WASHC3Q9Y3C0 194 aa12.29□□□□□ -0.44
HIF3A-218ENST00000600383 OR51B2Q9Y5P1 312 aa12.29□□□□□ -0.44
HIF3A-218ENST00000600383 TET2Q6N021 2002 aaPredicted RBP12.29□□□□□ -0.44
HIF3A-218ENST00000600383 SVEP1Q4LDE5 3571 aa12.29□□□□□ -0.44
HIF3A-218ENST00000600383 MFSD2BA6NFX1 497 aa12.29□□□□□ -0.44
HIF3A-218ENST00000600383 ARG1P05089 322 aa12.29□□□□□ -0.44
HIF3A-218ENST00000600383 M6PRP20645 277 aa12.29□□□□□ -0.44
HIF3A-218ENST00000600383 KLRD1Q13241 179 aa12.29□□□□□ -0.44
HIF3A-218ENST00000600383 HNF4GQ14541 408 aa12.29□□□□□ -0.44
HIF3A-218ENST00000600383 SMUG1Q53HV7 270 aa12.29□□□□□ -0.44
HIF3A-218ENST00000600383 TMEM182Q6ZP80 229 aaPredicted RBP12.29□□□□□ -0.44
HIF3A-218ENST00000600383 CCDC28AQ8IWP9 274 aa12.29□□□□□ -0.44
HIF3A-218ENST00000600383 BEND2Q8NDZ0 799 aa12.29□□□□□ -0.44
HIF3A-218ENST00000600383 OR4P4Q8NGL7 312 aa12.29□□□□□ -0.44
HIF3A-218ENST00000600383 OR52E5Q8NH55 327 aa12.29□□□□□ -0.44
HIF3A-218ENST00000600383 MARVELD3Q96A59 401 aa12.29□□□□□ -0.44
HIF3A-218ENST00000600383 RPEQ96AT9 228 aa12.29□□□□□ -0.44
HIF3A-218ENST00000600383 RITA1Q96K30 269 aa12.29□□□□□ -0.44
HIF3A-218ENST00000600383 UPK2O00526 184 aa12.28□□□□□ -0.44
HIF3A-218ENST00000600383 COX6B1P14854 86 aa12.28□□□□□ -0.44
HIF3A-218ENST00000600383 MC5RP33032 325 aa12.28□□□□□ -0.44
HIF3A-218ENST00000600383 FHITP49789 147 aa12.28□□□□□ -0.44
HIF3A-218ENST00000600383 PDLIM4P50479 330 aa12.28□□□□□ -0.44
HIF3A-218ENST00000600383 ATP5J2P56134 94 aa12.28□□□□□ -0.44
HIF3A-218ENST00000600383 HSPE1P61604 102 aaKnown RBP12.28□□□□□ -0.44
HIF3A-218ENST00000600383 SLC38A11Q08AI6 406 aa12.28□□□□□ -0.44
HIF3A-218ENST00000600383 POU2AF1Q16633 256 aa12.28□□□□□ -0.44
HIF3A-218ENST00000600383 AARDQ4LEZ3 155 aa12.28□□□□□ -0.44
HIF3A-218ENST00000600383 TMEM177Q53S58 311 aa12.28□□□□□ -0.44
HIF3A-218ENST00000600383 PXDC1Q5TGL8 231 aa12.28□□□□□ -0.44
HIF3A-218ENST00000600383 THNSL2Q86YJ6 484 aa12.28□□□□□ -0.44
HIF3A-218ENST00000600383 PDPNQ86YL7 162 aa12.28□□□□□ -0.44
HIF3A-218ENST00000600383 OR10P1Q8NGE3 313 aa12.28□□□□□ -0.44
HIF3A-218ENST00000600383 CLDND2Q8NHS1 167 aa12.28□□□□□ -0.44
HIF3A-218ENST00000600383 SCGB1C1Q8TD33 95 aa12.28□□□□□ -0.44
HIF3A-218ENST00000600383 MS4A7Q9GZW8 240 aaPredicted RBP12.28□□□□□ -0.44
HIF3A-218ENST00000600383 MMP26Q9NRE1 261 aa12.28□□□□□ -0.44
HIF3A-218ENST00000600383 TMEM14BQ9NUH8 114 aa12.28□□□□□ -0.44
HIF3A-218ENST00000600383 MED9Q9NWA0 146 aa12.28□□□□□ -0.44
HIF3A-218ENST00000600383 MAP1AP78559 2803 aaPredicted RBP12.28□□□□□ -0.44
HIF3A-218ENST00000600383 CENPEQ02224 2701 aa12.28□□□□□ -0.44
HIF3A-218ENST00000600383 IGFBPL1Q8WX77 278 aa12.28□□□□□ -0.44
HIF3A-218ENST00000600383 PCGF1Q9BSM1 259 aa12.28□□□□□ -0.44
HIF3A-218ENST00000600383 LPAR2Q9HBW0 351 aa12.28□□□□□ -0.44
HIF3A-218ENST00000600383 PRNDQ9UKY0 176 aa12.28□□□□□ -0.44
HIF3A-218ENST00000600383 FOXA2Q9Y261 457 aaPredicted RBP12.28□□□□□ -0.44
HIF3A-218ENST00000600383 VPS13CQ709C8 3753 aa12.27□□□□□ -0.44
HIF3A-218ENST00000600383 IGHV1-3A0A0C4DH29 117 aa12.27□□□□□ -0.45
HIF3A-218ENST00000600383 M0R1W7 72 aa12.27□□□□□ -0.45
HIF3A-218ENST00000600383 KBTBD11O94819 623 aa12.27□□□□□ -0.45
HIF3A-218ENST00000600383 PAX6P26367 422 aa12.27□□□□□ -0.45
HIF3A-218ENST00000600383 RAB13P51153 203 aa12.27□□□□□ -0.45
HIF3A-218ENST00000600383 LMO4P61968 165 aa12.27□□□□□ -0.45
HIF3A-218ENST00000600383 Q6ZRG5 221 aa12.27□□□□□ -0.45
HIF3A-218ENST00000600383 FAM168AQ92567 244 aa12.27□□□□□ -0.45
HIF3A-218ENST00000600383 ENY2Q9NPA8 101 aa12.27□□□□□ -0.45
HIF3A-218ENST00000600383 AMMECR1Q9Y4X0 333 aaPredicted RBP12.27□□□□□ -0.45
HIF3A-218ENST00000600383 HILPDAQ9Y5L2 63 aa12.27□□□□□ -0.45
HIF3A-218ENST00000600383 CHD6Q8TD26 2715 aa12.27□□□□□ -0.45
HIF3A-218ENST00000600383 PRTN3P24158 256 aa12.26□□□□□ -0.45
HIF3A-218ENST00000600383 CAMLGP49069 296 aa12.26□□□□□ -0.45
HIF3A-218ENST00000600383 ZNF616Q08AN1 781 aa12.26□□□□□ -0.45
HIF3A-218ENST00000600383 VMO1Q7Z5L0 202 aa12.26□□□□□ -0.45
HIF3A-218ENST00000600383 GNPNAT1Q96EK6 184 aaPredicted RBP12.26□□□□□ -0.45
HIF3A-218ENST00000600383 SAT2Q96F10 170 aaPredicted RBP12.26□□□□□ -0.45
HIF3A-218ENST00000600383 RSG1Q9BU20 258 aa12.26□□□□□ -0.45
HIF3A-218ENST00000600383 BET1LQ9NYM9 111 aa12.26□□□□□ -0.45
HIF3A-218ENST00000600383 CACFD1Q9UGQ2 172 aa12.26□□□□□ -0.45
HIF3A-218ENST00000600383 FBXO7Q9Y3I1 522 aa12.26□□□□□ -0.45
HIF3A-218ENST00000600383 UBE2L5PA0A1B0GUS4 154 aa12.26□□□□□ -0.45
HIF3A-218ENST00000600383 C15orf62A8K5M9 175 aa12.26□□□□□ -0.45
HIF3A-218ENST00000600383 RRHO14718 337 aa12.26□□□□□ -0.45
HIF3A-218ENST00000600383 IL6RP08887 468 aaPredicted RBP12.26□□□□□ -0.45
HIF3A-218ENST00000600383 COL8A1P27658 744 aa12.26□□□□□ -0.45
HIF3A-218ENST00000600383 HTR1DP28221 377 aa12.26□□□□□ -0.45
HIF3A-218ENST00000600383 VDAC2P45880 294 aaPredicted RBP12.26□□□□□ -0.45
HIF3A-218ENST00000600383 RPP30P78346 268 aaKnown RBP12.26□□□□□ -0.45
HIF3A-218ENST00000600383 BLOC1S1P78537 153 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms