RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 PPP5CP53041 499 aa11.84□□□□□ -0.51
LIG1-219ENST00000600055 LPCAT3Q6P1A2 487 aa11.84□□□□□ -0.51
LIG1-219ENST00000600055 ARRDC1Q8N5I2 433 aa11.84□□□□□ -0.51
LIG1-219ENST00000600055 TCTEX1D1Q8N7M0 179 aa11.84□□□□□ -0.51
LIG1-219ENST00000600055 OR6Q1Q8NGQ2 317 aa11.84□□□□□ -0.51
LIG1-219ENST00000600055 SRSF12Q8WXF0 261 aaKnown RBP11.84□□□□□ -0.51
LIG1-219ENST00000600055 S100ZQ8WXG8 99 aa11.84□□□□□ -0.51
LIG1-219ENST00000600055 RAX2Q96IS3 184 aa11.84□□□□□ -0.51
LIG1-219ENST00000600055 OR5B12Q96R08 314 aa11.84□□□□□ -0.51
LIG1-219ENST00000600055 V9GYH0 126 aa11.84□□□□□ -0.51
LIG1-219ENST00000600055 MGAM2Q2M2H8 2515 aa11.84□□□□□ -0.51
LIG1-219ENST00000600055 NBEAL1Q6ZS30 2694 aa11.83□□□□□ -0.51
LIG1-219ENST00000600055 G3V4G9 280 aa11.83□□□□□ -0.52
LIG1-219ENST00000600055 MYOD1P15172 320 aa11.83□□□□□ -0.52
LIG1-219ENST00000600055 F2RP25116 425 aa11.83□□□□□ -0.52
LIG1-219ENST00000600055 LPAR6P43657 344 aa11.83□□□□□ -0.52
LIG1-219ENST00000600055 TAS2R31P59538 309 aa11.83□□□□□ -0.52
LIG1-219ENST00000600055 ZNF45Q02386 682 aa11.83□□□□□ -0.52
LIG1-219ENST00000600055 SCGB2B2Q4G0G5 96 aa11.83□□□□□ -0.52
LIG1-219ENST00000600055 ZNF585BQ52M93 769 aa11.83□□□□□ -0.52
LIG1-219ENST00000600055 OR4A47Q6IF82 309 aa11.83□□□□□ -0.52
LIG1-219ENST00000600055 TBC1D26Q86UD7 250 aa11.83□□□□□ -0.52
LIG1-219ENST00000600055 MRPL41Q8IXM3 137 aaKnown RBP11.83□□□□□ -0.52
LIG1-219ENST00000600055 MMD2Q8IY49 270 aa11.83□□□□□ -0.52
LIG1-219ENST00000600055 SLC38A6Q8IZM9 456 aa11.83□□□□□ -0.52
LIG1-219ENST00000600055 POC5Q8NA72 575 aa11.83□□□□□ -0.52
LIG1-219ENST00000600055 OR5M8Q8NGP6 311 aa11.83□□□□□ -0.52
LIG1-219ENST00000600055 VSTM2AQ8TAG5 236 aa11.83□□□□□ -0.52
LIG1-219ENST00000600055 TMEM167AQ8TBQ9 72 aa11.83□□□□□ -0.52
LIG1-219ENST00000600055 CD300LFQ8TDQ1 290 aa11.83□□□□□ -0.52
LIG1-219ENST00000600055 PHB2Q99623 299 aa11.83□□□□□ -0.52
LIG1-219ENST00000600055 TRAV3A0A0B4J244 114 aa11.82□□□□□ -0.52
LIG1-219ENST00000600055 E7EUB6 86 aa11.82□□□□□ -0.52
LIG1-219ENST00000600055 CCL24O00175 119 aa11.82□□□□□ -0.52
LIG1-219ENST00000600055 ACTL6BO94805 426 aa11.82□□□□□ -0.52
LIG1-219ENST00000600055 NQO2P16083 231 aa11.82□□□□□ -0.52
LIG1-219ENST00000600055 CD33P20138 364 aa11.82□□□□□ -0.52
LIG1-219ENST00000600055 MYCNOSP40205 109 aa11.82□□□□□ -0.52
LIG1-219ENST00000600055 ETV6P41212 452 aa11.82□□□□□ -0.52
LIG1-219ENST00000600055 PYDC2Q56P42 97 aa11.82□□□□□ -0.52
LIG1-219ENST00000600055 OXLD1Q5BKU9 147 aa11.82□□□□□ -0.52
LIG1-219ENST00000600055 CCDC190Q86UF4 302 aa11.82□□□□□ -0.52
LIG1-219ENST00000600055 LINC00482Q8N8I6 264 aa11.82□□□□□ -0.52
LIG1-219ENST00000600055 WFDC9Q8NEX5 89 aa11.82□□□□□ -0.52
LIG1-219ENST00000600055 OR4C16Q8NGL9 310 aa11.82□□□□□ -0.52
LIG1-219ENST00000600055 TERB2Q8NHR7 220 aa11.82□□□□□ -0.52
LIG1-219ENST00000600055 C4orf3Q8WVX3 66 aa11.82□□□□□ -0.52
LIG1-219ENST00000600055 MRGPRFQ96AM1 343 aa11.82□□□□□ -0.52
LIG1-219ENST00000600055 UBE2E2Q96LR5 201 aa11.82□□□□□ -0.52
LIG1-219ENST00000600055 P2RX4Q99571 388 aa11.82□□□□□ -0.52
LIG1-219ENST00000600055 ALX4Q9H161 411 aaPredicted RBP11.82□□□□□ -0.52
LIG1-219ENST00000600055 PLEKHA2Q9HB19 425 aa11.82□□□□□ -0.52
LIG1-219ENST00000600055 HRASLSQ9HDD0 168 aa11.82□□□□□ -0.52
LIG1-219ENST00000600055 SLC2A9Q9NRM0 540 aa11.82□□□□□ -0.52
LIG1-219ENST00000600055 ZNF355PQ9NSJ1 428 aa11.82□□□□□ -0.52
LIG1-219ENST00000600055 VSIG4Q9Y279 399 aa11.82□□□□□ -0.52
LIG1-219ENST00000600055 A0A1B0GW64 132 aa11.81□□□□□ -0.52
LIG1-219ENST00000600055 ANKRD20A5PA0PJZ0 165 aa11.81□□□□□ -0.52
LIG1-219ENST00000600055 HMX3A6NHT5 357 aa11.81□□□□□ -0.52
LIG1-219ENST00000600055 I3L521 148 aa11.81□□□□□ -0.52
LIG1-219ENST00000600055 CREBL2O60519 120 aaPredicted RBP11.81□□□□□ -0.52
LIG1-219ENST00000600055 AKAIN1P0CW23 69 aa11.81□□□□□ -0.52
LIG1-219ENST00000600055 IGLL1P15814 213 aa11.81□□□□□ -0.52
LIG1-219ENST00000600055 SLC6A1P30531 599 aa11.81□□□□□ -0.52
LIG1-219ENST00000600055 TPPP2P59282 170 aa11.81□□□□□ -0.52
LIG1-219ENST00000600055 DEFA5Q01523 94 aa11.81□□□□□ -0.52
LIG1-219ENST00000600055 MEF2DQ14814 521 aa11.81□□□□□ -0.52
LIG1-219ENST00000600055 ZNF79Q15937 498 aa11.81□□□□□ -0.52
LIG1-219ENST00000600055 POU2AF1Q16633 256 aa11.81□□□□□ -0.52
LIG1-219ENST00000600055 DMBX1Q8NFW5 382 aa11.81□□□□□ -0.52
LIG1-219ENST00000600055 MARCH1Q8TCQ1 289 aa11.81□□□□□ -0.52
LIG1-219ENST00000600055 THAP7Q9BT49 309 aaPredicted RBP11.81□□□□□ -0.52
LIG1-219ENST00000600055 TMEM140Q9NV12 185 aa11.81□□□□□ -0.52
LIG1-219ENST00000600055 BET1LQ9NYM9 111 aa11.81□□□□□ -0.52
LIG1-219ENST00000600055 COMMD9Q9P000 198 aa11.81□□□□□ -0.52
LIG1-219ENST00000600055 DISC1C4P0D8 188 aa11.8□□□□□ -0.52
LIG1-219ENST00000600055 TEX22C9J3V5 150 aa11.8□□□□□ -0.52
LIG1-219ENST00000600055 UPK2O00526 184 aa11.8□□□□□ -0.52
LIG1-219ENST00000600055 MPPED1O15442 326 aa11.8□□□□□ -0.52
LIG1-219ENST00000600055 IGHV3-11P01762 117 aa11.8□□□□□ -0.52
LIG1-219ENST00000600055 TRGV3P03979 118 aa11.8□□□□□ -0.52
LIG1-219ENST00000600055 IL6RP08887 468 aaPredicted RBP11.8□□□□□ -0.52
LIG1-219ENST00000600055 S100GP29377 79 aa11.8□□□□□ -0.52
LIG1-219ENST00000600055 G6PCP35575 357 aa11.8□□□□□ -0.52
LIG1-219ENST00000600055 RPL27AP46776 148 aaKnown RBP11.8□□□□□ -0.52
LIG1-219ENST00000600055 PIGPP57054 158 aa11.8□□□□□ -0.52
LIG1-219ENST00000600055 RPL8P62917 257 aaKnown RBP11.8□□□□□ -0.52
LIG1-219ENST00000600055 SAMD5Q5TGI4 173 aa11.8□□□□□ -0.52
LIG1-219ENST00000600055 OR13C8Q8NGS7 320 aa11.8□□□□□ -0.52
LIG1-219ENST00000600055 OR4A5Q8NH83 315 aa11.8□□□□□ -0.52
LIG1-219ENST00000600055 TMEM68Q96MH6 324 aa11.8□□□□□ -0.52
LIG1-219ENST00000600055 FYTTD1Q96QD9 318 aaKnown RBP11.8□□□□□ -0.52
LIG1-219ENST00000600055 AIFM2Q9BRQ8 373 aa11.8□□□□□ -0.52
LIG1-219ENST00000600055 COA4Q9NYJ1 87 aa11.8□□□□□ -0.52
LIG1-219ENST00000600055 KRASP01116 189 aa11.79□□□□□ -0.52
LIG1-219ENST00000600055 IGKV1-39P01597 117 aa11.79□□□□□ -0.52
LIG1-219ENST00000600055 PRH1P02810 166 aa11.79□□□□□ -0.52
LIG1-219ENST00000600055 IGKV1D-39P04432 117 aa11.79□□□□□ -0.52
LIG1-219ENST00000600055 HLA-GP17693 338 aa11.79□□□□□ -0.52
LIG1-219ENST00000600055 CD40LGP29965 261 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms