RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 Q56UQ5 140 aa2.92□□□□□ -1.94
HERC3-213ENST00000598772 FAM71F2Q6NXP2 309 aa2.92□□□□□ -1.94
HERC3-213ENST00000598772 TRAT1Q6PIZ9 186 aa2.92□□□□□ -1.94
HERC3-213ENST00000598772 ZNF705AQ6ZN79 300 aaPredicted RBP2.92□□□□□ -1.94
HERC3-213ENST00000598772 ZNF554Q86TJ5 538 aa2.92□□□□□ -1.94
HERC3-213ENST00000598772 PQLC1Q8N2U9 271 aa2.92□□□□□ -1.94
HERC3-213ENST00000598772 HSD17B11Q8NBQ5 300 aa2.92□□□□□ -1.94
HERC3-213ENST00000598772 OR9Q2Q8NGE9 314 aa2.92□□□□□ -1.94
HERC3-213ENST00000598772 OR4C16Q8NGL9 310 aa2.92□□□□□ -1.94
HERC3-213ENST00000598772 ZNF502Q8TBZ5 544 aa2.92□□□□□ -1.94
HERC3-213ENST00000598772 RXFP4Q8TDU9 374 aa2.92□□□□□ -1.94
HERC3-213ENST00000598772 ST8SIA2Q92186 375 aa2.92□□□□□ -1.94
HERC3-213ENST00000598772 PPP1R14BQ96C90 147 aa2.92□□□□□ -1.94
HERC3-213ENST00000598772 ZNF414Q96IQ9 312 aa2.92□□□□□ -1.94
HERC3-213ENST00000598772 TBX5Q99593 518 aa2.92□□□□□ -1.94
HERC3-213ENST00000598772 ROPN1BQ9BZX4 212 aaPredicted RBP2.92□□□□□ -1.94
HERC3-213ENST00000598772 CMC2Q9NRP2 79 aa2.92□□□□□ -1.94
HERC3-213ENST00000598772 IL36GQ9NZH8 169 aa2.92□□□□□ -1.94
HERC3-213ENST00000598772 ABRACLQ9P1F3 81 aa2.92□□□□□ -1.94
HERC3-213ENST00000598772 BAIAP2Q9UQB8 552 aa2.92□□□□□ -1.94
HERC3-213ENST00000598772 PEX16Q9Y5Y5 336 aa2.92□□□□□ -1.94
HERC3-213ENST00000598772 TMEM14AQ9Y6G1 99 aa2.92□□□□□ -1.94
HERC3-213ENST00000598772 LRCOL1A6NCL2 159 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 CBY3A6NI87 242 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 C15orf62A8K5M9 175 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 H3BN98 237 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 SOCS1O15524 211 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 SRSF10O75494 262 aaKnown RBP2.91□□□□□ -1.94
HERC3-213ENST00000598772 BAG2O95816 211 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 CST1P01037 141 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 GASTP01350 101 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 APOHP02749 345 aaPredicted RBP2.91□□□□□ -1.94
HERC3-213ENST00000598772 KRT8P05787 483 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 M6PRP20645 277 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 CCL1P22362 96 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 RRM2P31350 389 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 CEACAM6P40199 344 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 RPL27AP46776 148 aaKnown RBP2.91□□□□□ -1.94
HERC3-213ENST00000598772 ALDH3B2P48448 385 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 CCR9P51686 369 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 RBM11P57052 281 aaKnown RBP2.91□□□□□ -1.94
HERC3-213ENST00000598772 ROM1Q03395 351 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 PRR4Q16378 134 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 FAM90A2PQ658T7 463 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 SIGIRRQ6IA17 410 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 ELP2Q6IA86 826 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 RAB12Q6IQ22 244 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 SLC25A24Q6NUK1 477 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 EPGNQ6UW88 154 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 Q6ZSR3 168 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 RASSF6Q6ZTQ3 369 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 UTS2BQ765I0 119 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 TPRA1Q86W33 373 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 IFT20Q8IY31 132 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 OR6M1Q8NGM8 313 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 OR13C3Q8NGS6 347 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 NEDD4LQ96PU5 975 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 S100A13Q99584 98 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 ELAC2Q9BQ52 826 aaKnown RBP2.91□□□□□ -1.94
HERC3-213ENST00000598772 CCDC28BQ9BUN5 200 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 HINT2Q9BX68 163 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 C11orf54Q9H0W9 315 aaPredicted RBP2.91□□□□□ -1.94
HERC3-213ENST00000598772 Q9HAA7 133 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 PPCSQ9HAB8 311 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 IL1RAPQ9NPH3 570 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 IL20Q9NYY1 176 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 TVP23BQ9NYZ1 205 aa2.91□□□□□ -1.94
HERC3-213ENST00000598772 A0A096LPF7 62 aa2.9□□□□□ -1.95
HERC3-213ENST00000598772 RBFOX3A6NFN3 312 aa2.9□□□□□ -1.95
HERC3-213ENST00000598772 NPIPB5A8MRT5 1133 aa2.9□□□□□ -1.95
HERC3-213ENST00000598772 LYRM9A8MSI8 78 aa2.9□□□□□ -1.95
HERC3-213ENST00000598772 TEX22C9J3V5 150 aa2.9□□□□□ -1.95
HERC3-213ENST00000598772 ZNF670-ZNF695F2Z2N8 137 aa2.9□□□□□ -1.95
HERC3-213ENST00000598772 K7EQG2 157 aa2.9□□□□□ -1.95
HERC3-213ENST00000598772 EBAG9O00559 213 aa2.9□□□□□ -1.95
HERC3-213ENST00000598772 GPX5O75715 221 aa2.9□□□□□ -1.95
HERC3-213ENST00000598772 CRYZL1O95825 349 aa2.9□□□□□ -1.95
HERC3-213ENST00000598772 IL6RP08887 468 aaPredicted RBP2.9□□□□□ -1.95
HERC3-213ENST00000598772 HTN1P15515 57 aa2.9□□□□□ -1.95
HERC3-213ENST00000598772 EVI2AP22794 236 aa2.9□□□□□ -1.95
HERC3-213ENST00000598772 CRHBPP24387 322 aa2.9□□□□□ -1.95
HERC3-213ENST00000598772 PTBP1P26599 531 aaKnown RBP eCLIP2.9□□□□□ -1.95
HERC3-213ENST00000598772 RASSF2P50749 326 aa2.9□□□□□ -1.95
HERC3-213ENST00000598772 SNRPGP62308 76 aaKnown RBP2.9□□□□□ -1.95
HERC3-213ENST00000598772 PPP1R8Q12972 351 aaKnown RBP2.9□□□□□ -1.95
HERC3-213ENST00000598772 DHRS2Q13268 280 aa2.9□□□□□ -1.95
HERC3-213ENST00000598772 GK3PQ14409 553 aa2.9□□□□□ -1.95
HERC3-213ENST00000598772 RTL8BQ17RB0 113 aa2.9□□□□□ -1.95
HERC3-213ENST00000598772 TMED4Q7Z7H5 227 aa2.9□□□□□ -1.95
HERC3-213ENST00000598772 MMD2Q8IY49 270 aa2.9□□□□□ -1.95
HERC3-213ENST00000598772 CCDC54Q8NEL0 328 aa2.9□□□□□ -1.95
HERC3-213ENST00000598772 TEX47Q8TBZ9 253 aa2.9□□□□□ -1.95
HERC3-213ENST00000598772 BSCL2Q96G97 398 aaPredicted RBP2.9□□□□□ -1.95
HERC3-213ENST00000598772 LINC01600Q96MT4 127 aa2.9□□□□□ -1.95
HERC3-213ENST00000598772 CLUHP3Q96NS8 147 aa2.9□□□□□ -1.95
HERC3-213ENST00000598772 EBF4Q9BQW3 602 aa2.9□□□□□ -1.95
HERC3-213ENST00000598772 THTPAQ9BU02 230 aa2.9□□□□□ -1.95
HERC3-213ENST00000598772 METTL9Q9H1A3 318 aa2.9□□□□□ -1.95
HERC3-213ENST00000598772 TMPRSS5Q9H3S3 457 aa2.9□□□□□ -1.95
HERC3-213ENST00000598772 CHMP1AQ9HD42 196 aaPredicted RBP2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms