RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 CATR1Q13166 79 aa17.58■□□□□ 0.4
SSBP4-205ENST00000598159 C10orf55Q5SWW7 151 aa17.58■□□□□ 0.4
SSBP4-205ENST00000598159 IL34Q6ZMJ4 242 aa17.58■□□□□ 0.4
SSBP4-205ENST00000598159 SPAG16Q8N0X2 631 aa17.58■□□□□ 0.4
SSBP4-205ENST00000598159 OR4A5Q8NH83 315 aa17.58■□□□□ 0.4
SSBP4-205ENST00000598159 GPHA2Q96T91 129 aa17.58■□□□□ 0.4
SSBP4-205ENST00000598159 SLC2A9Q9NRM0 540 aa17.58■□□□□ 0.4
SSBP4-205ENST00000598159 SIGLEC8Q9NYZ4 499 aa17.58■□□□□ 0.4
SSBP4-205ENST00000598159 HMX3A6NHT5 357 aa17.57■□□□□ 0.4
SSBP4-205ENST00000598159 H0Y980 276 aa17.57■□□□□ 0.4
SSBP4-205ENST00000598159 RBFOX2O43251 390 aaKnown RBP eCLIP17.57■□□□□ 0.44e-7■■■■□ 22.9
SSBP4-205ENST00000598159 IL6RP08887 468 aaPredicted RBP17.57■□□□□ 0.4
SSBP4-205ENST00000598159 ZNF735P0CB33 412 aa17.57■□□□□ 0.4
SSBP4-205ENST00000598159 FXYD4P59646 89 aa17.57■□□□□ 0.4
SSBP4-205ENST00000598159 DHRS11Q6UWP2 260 aa17.57■□□□□ 0.4
SSBP4-205ENST00000598159 SAMD12Q8N8I0 201 aa17.57■□□□□ 0.4
SSBP4-205ENST00000598159 BORCS5Q969J3 196 aa17.57■□□□□ 0.4
SSBP4-205ENST00000598159 KCTD12Q96CX2 325 aaKnown RBP17.57■□□□□ 0.4
SSBP4-205ENST00000598159 BET1LQ9NYM9 111 aa17.57■□□□□ 0.4
SSBP4-205ENST00000598159 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.56■□□□□ 0.4
SSBP4-205ENST00000598159 DPPA5A6NC42 116 aa17.56■□□□□ 0.4
SSBP4-205ENST00000598159 MEIS3P1A6NDR6 274 aa17.56■□□□□ 0.4
SSBP4-205ENST00000598159 TRIM64CA6NLI5 447 aa17.56■□□□□ 0.4
SSBP4-205ENST00000598159 NPIPB5A8MRT5 1133 aa17.56■□□□□ 0.4
SSBP4-205ENST00000598159 TEX22C9J3V5 150 aa17.56■□□□□ 0.4
SSBP4-205ENST00000598159 HPRT1P00492 218 aa17.56■□□□□ 0.4
SSBP4-205ENST00000598159 RPL8P62917 257 aaKnown RBP17.56■□□□□ 0.4
SSBP4-205ENST00000598159 EXOSC2Q13868 293 aaKnown RBP17.56■□□□□ 0.4
SSBP4-205ENST00000598159 TMEM69Q5SWH9 247 aa17.56■□□□□ 0.4
SSBP4-205ENST00000598159 SSX9Q7RTT3 188 aa17.56■□□□□ 0.4
SSBP4-205ENST00000598159 HAPLN4Q86UW8 402 aa17.56■□□□□ 0.4
SSBP4-205ENST00000598159 SBSPONQ8IVN8 264 aa17.56■□□□□ 0.4
SSBP4-205ENST00000598159 FYTTD1Q96QD9 318 aaKnown RBP17.56■□□□□ 0.4
SSBP4-205ENST00000598159 PEMTQ9UBM1 199 aa17.56■□□□□ 0.4
SSBP4-205ENST00000598159 E7EUB6 86 aa17.55■□□□□ 0.4
SSBP4-205ENST00000598159 SULT1C2O00338 296 aa17.55■□□□□ 0.4
SSBP4-205ENST00000598159 CSN3P07498 182 aa17.55■□□□□ 0.4
SSBP4-205ENST00000598159 FRMD6-AS1P0C7T7 363 aa17.55■□□□□ 0.4
SSBP4-205ENST00000598159 TAS2R31P59538 309 aa17.55■□□□□ 0.4
SSBP4-205ENST00000598159 TAS2R20P59543 309 aa17.55■□□□□ 0.4
SSBP4-205ENST00000598159 ZNF818PQ6ZRF7 136 aa17.55■□□□□ 0.4
SSBP4-205ENST00000598159 CD300LFQ8TDQ1 290 aa17.55■□□□□ 0.4
SSBP4-205ENST00000598159 SLC25A46Q96AG3 418 aa17.55■□□□□ 0.4
SSBP4-205ENST00000598159 OR2J3O76001 311 aa17.54■□□□□ 0.4
SSBP4-205ENST00000598159 DHFRP00374 187 aa17.54■□□□□ 0.4
SSBP4-205ENST00000598159 CRYGCP07315 174 aa17.54■□□□□ 0.4
SSBP4-205ENST00000598159 NAT1P18440 290 aa17.54■□□□□ 0.4
SSBP4-205ENST00000598159 PRSS3P35030 304 aa17.54■□□□□ 0.4
SSBP4-205ENST00000598159 HERV-K104P61576 105 aa17.54■□□□□ 0.4
SSBP4-205ENST00000598159 C15orf32Q32M92 178 aa17.54■□□□□ 0.4
SSBP4-205ENST00000598159 OR4A47Q6IF82 309 aa17.54■□□□□ 0.4
SSBP4-205ENST00000598159 Q8N1Y9 231 aa17.54■□□□□ 0.4
SSBP4-205ENST00000598159 CMTM3Q96MX0 182 aa17.54■□□□□ 0.4
SSBP4-205ENST00000598159 EHFQ9NZC4 300 aa17.54■□□□□ 0.4
SSBP4-205ENST00000598159 ADAM30Q9UKF2 790 aa17.54■□□□□ 0.4
SSBP4-205ENST00000598159 ANAPC10Q9UM13 185 aa17.54■□□□□ 0.4
SSBP4-205ENST00000598159 BMPR1BO00238 502 aa17.53■□□□□ 0.4
SSBP4-205ENST00000598159 NQO2P16083 231 aa17.53■□□□□ 0.4
SSBP4-205ENST00000598159 HLA-GP17693 338 aa17.53■□□□□ 0.4
SSBP4-205ENST00000598159 PSMB6P28072 239 aa17.53■□□□□ 0.4
SSBP4-205ENST00000598159 GNRHRP30968 328 aa17.53■□□□□ 0.4
SSBP4-205ENST00000598159 RFX2P48378 723 aa17.53■□□□□ 0.4
SSBP4-205ENST00000598159 POU2AF1Q16633 256 aa17.53■□□□□ 0.4
SSBP4-205ENST00000598159 PLEKHA2Q9HB19 425 aa17.53■□□□□ 0.4
SSBP4-205ENST00000598159 HRASLSQ9HDD0 168 aa17.53■□□□□ 0.4
SSBP4-205ENST00000598159 FBXL7Q9UJT9 491 aa17.53■□□□□ 0.4
SSBP4-205ENST00000598159 SMIM31A0A1B0GVY4 71 aa17.52■□□□□ 0.4
SSBP4-205ENST00000598159 A8MZ25 164 aa17.52■□□□□ 0.4
SSBP4-205ENST00000598159 TAS2R46P59540 309 aa17.52■□□□□ 0.4
SSBP4-205ENST00000598159 KLK9Q2XQG4 91 aa17.52■□□□□ 0.4
SSBP4-205ENST00000598159 TMEM17Q86X19 198 aa17.52■□□□□ 0.4
SSBP4-205ENST00000598159 ZNF2Q9BSG1 426 aaPredicted RBP17.52■□□□□ 0.4
SSBP4-205ENST00000598159 FUNDC2Q9BWH2 189 aa17.52■□□□□ 0.4
SSBP4-205ENST00000598159 KLK9Q9UKQ9 250 aa17.52■□□□□ 0.4
SSBP4-205ENST00000598159 A0A1B0GW64 132 aa17.51■□□□□ 0.39
SSBP4-205ENST00000598159 PMP2P02689 132 aa17.51■□□□□ 0.39
SSBP4-205ENST00000598159 FGF2P09038 288 aa17.51■□□□□ 0.39
SSBP4-205ENST00000598159 HIST1H1BP16401 226 aaKnown RBP17.51■□□□□ 0.39
SSBP4-205ENST00000598159 CTRB1P17538 263 aa17.51■□□□□ 0.39
SSBP4-205ENST00000598159 MECP2P51608 486 aaKnown RBP17.51■□□□□ 0.39
SSBP4-205ENST00000598159 AADACL3Q5VUY0 350 aa17.51■□□□□ 0.39
SSBP4-205ENST00000598159 CTRB2Q6GPI1 263 aa17.51■□□□□ 0.39
SSBP4-205ENST00000598159 LCN12Q6JVE5 192 aa17.51■□□□□ 0.39
SSBP4-205ENST00000598159 SGPP2Q8IWX5 399 aa17.51■□□□□ 0.39
SSBP4-205ENST00000598159 Q8N402 240 aa17.51■□□□□ 0.39
SSBP4-205ENST00000598159 OR5H2Q8NGV7 314 aa17.51■□□□□ 0.39
SSBP4-205ENST00000598159 OR51H1Q8NH63 302 aa17.51■□□□□ 0.39
SSBP4-205ENST00000598159 MOB3AQ96BX8 217 aa17.51■□□□□ 0.39
SSBP4-205ENST00000598159 FANCD2OSQ96PS1 177 aa17.51■□□□□ 0.39
SSBP4-205ENST00000598159 UPK2O00526 184 aa17.5■□□□□ 0.39
SSBP4-205ENST00000598159 GGCTO75223 188 aaKnown RBP17.5■□□□□ 0.39
SSBP4-205ENST00000598159 IGHV4-30-4P0DP06 118 aa17.5■□□□□ 0.39
SSBP4-205ENST00000598159 AREGP15514 252 aa17.5■□□□□ 0.39
SSBP4-205ENST00000598159 OR2K2Q8NGT1 345 aa17.5■□□□□ 0.39
SSBP4-205ENST00000598159 OR6F1Q8NGZ6 308 aa17.5■□□□□ 0.39
SSBP4-205ENST00000598159 ZMAT4Q9H898 229 aa17.5■□□□□ 0.39
SSBP4-205ENST00000598159 C19orf73Q9NVV2 129 aa17.5■□□□□ 0.39
SSBP4-205ENST00000598159 COMMD3Q9UBI1 195 aa17.5■□□□□ 0.39
SSBP4-205ENST00000598159 DMRT1Q9Y5R6 373 aa17.5■□□□□ 0.39
SSBP4-205ENST00000598159 PGLYRP1O75594 196 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms