RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 C6orf62Q9GZU0 229 aaPredicted RBP17.65■□□□□ 0.42
IRF3-220ENST00000598108 GPR31O00270 319 aa17.64■□□□□ 0.41
IRF3-220ENST00000598108 ACTL6BO94805 426 aa17.64■□□□□ 0.41
IRF3-220ENST00000598108 DUS4LO95620 317 aaKnown RBP17.64■□□□□ 0.41
IRF3-220ENST00000598108 RLN1P04808 185 aa17.64■□□□□ 0.41
IRF3-220ENST00000598108 PHLDA2Q53GA4 152 aa17.64■□□□□ 0.41
IRF3-220ENST00000598108 ADAD2Q8NCV1 583 aaKnown RBP17.64■□□□□ 0.41
IRF3-220ENST00000598108 OR4D10Q8NGI6 311 aa17.64■□□□□ 0.41
IRF3-220ENST00000598108 VSTM2AQ8TAG5 236 aa17.64■□□□□ 0.41
IRF3-220ENST00000598108 NXF2Q9GZY0 626 aaKnown RBP17.64■□□□□ 0.41
IRF3-220ENST00000598108 RBM38Q9H0Z9 239 aaKnown RBP17.64■□□□□ 0.41
IRF3-220ENST00000598108 SLA2Q9H6Q3 261 aa17.64■□□□□ 0.41
IRF3-220ENST00000598108 A0A1B0GW64 132 aa17.63■□□□□ 0.41
IRF3-220ENST00000598108 H3BUA1 57 aa17.63■□□□□ 0.41
IRF3-220ENST00000598108 GABARAPH6UMI1 98 aa17.63■□□□□ 0.41
IRF3-220ENST00000598108 CREBL2O60519 120 aaPredicted RBP17.63■□□□□ 0.41
IRF3-220ENST00000598108 RBMXL2O75526 392 aaKnown RBP17.63■□□□□ 0.41
IRF3-220ENST00000598108 S1PR2O95136 353 aa17.63■□□□□ 0.41
IRF3-220ENST00000598108 HPRT1P00492 218 aa17.63■□□□□ 0.41
IRF3-220ENST00000598108 LGALS1P09382 135 aaKnown RBP17.63■□□□□ 0.41
IRF3-220ENST00000598108 MYOD1P15172 320 aa17.63■□□□□ 0.41
IRF3-220ENST00000598108 HOXD3P31249 432 aaPredicted RBP17.63■□□□□ 0.41
IRF3-220ENST00000598108 TAS2R31P59538 309 aa17.63■□□□□ 0.41
IRF3-220ENST00000598108 KRTAP10-11P60412 298 aa17.63■□□□□ 0.41
IRF3-220ENST00000598108 DEFA5Q01523 94 aa17.63■□□□□ 0.41
IRF3-220ENST00000598108 ZNF616Q08AN1 781 aa17.63■□□□□ 0.41
IRF3-220ENST00000598108 OR4A47Q6IF82 309 aa17.63■□□□□ 0.41
IRF3-220ENST00000598108 CMTM1Q8IZ96 169 aa17.63■□□□□ 0.41
IRF3-220ENST00000598108 CD300LFQ8TDQ1 290 aa17.63■□□□□ 0.41
IRF3-220ENST00000598108 RSRP1Q9BUV0 290 aa17.63■□□□□ 0.41
IRF3-220ENST00000598108 TRAV3A0A0B4J244 114 aa17.62■□□□□ 0.41
IRF3-220ENST00000598108 CCDC160A6NGH7 325 aa17.62■□□□□ 0.41
IRF3-220ENST00000598108 HMX3A6NHT5 357 aa17.62■□□□□ 0.41
IRF3-220ENST00000598108 IL6RP08887 468 aaPredicted RBP17.62■□□□□ 0.41
IRF3-220ENST00000598108 RPA2P15927 270 aa17.62■□□□□ 0.41
IRF3-220ENST00000598108 F2RP25116 425 aa17.62■□□□□ 0.41
IRF3-220ENST00000598108 TNFSF8P32971 234 aa17.62■□□□□ 0.41
IRF3-220ENST00000598108 UCP3P55916 312 aa17.62■□□□□ 0.41
IRF3-220ENST00000598108 POU2AF1Q16633 256 aa17.62■□□□□ 0.41
IRF3-220ENST00000598108 ZNF585BQ52M93 769 aa17.62■□□□□ 0.41
IRF3-220ENST00000598108 RNASE10Q5GAN6 216 aaKnown RBP17.62■□□□□ 0.41
IRF3-220ENST00000598108 TMEM229BQ8NBD8 167 aa17.62■□□□□ 0.41
IRF3-220ENST00000598108 MCFD2Q8NI22 146 aa17.62■□□□□ 0.41
IRF3-220ENST00000598108 DGCR14Q96DF8 476 aaKnown RBP17.62■□□□□ 0.41
IRF3-220ENST00000598108 SPIN2AQ99865 258 aa17.62■□□□□ 0.41
IRF3-220ENST00000598108 SPIN2BQ9BPZ2 258 aa17.62■□□□□ 0.41
IRF3-220ENST00000598108 PLEKHA2Q9HB19 425 aa17.62■□□□□ 0.41
IRF3-220ENST00000598108 BET1LQ9NYM9 111 aa17.62■□□□□ 0.41
IRF3-220ENST00000598108 TEX22C9J3V5 150 aa17.61■□□□□ 0.41
IRF3-220ENST00000598108 BRI3O95415 125 aa17.61■□□□□ 0.41
IRF3-220ENST00000598108 CD74P04233 296 aa17.61■□□□□ 0.41
IRF3-220ENST00000598108 IFNA6P05013 189 aa17.61■□□□□ 0.41
IRF3-220ENST00000598108 OR9G9P0C7N8 305 aa17.61■□□□□ 0.41
IRF3-220ENST00000598108 NQO2P16083 231 aa17.61■□□□□ 0.41
IRF3-220ENST00000598108 IL18Q14116 193 aa17.61■□□□□ 0.41
IRF3-220ENST00000598108 LPCAT3Q6P1A2 487 aa17.61■□□□□ 0.41
IRF3-220ENST00000598108 LHFPL1Q86WI0 220 aa17.61■□□□□ 0.41
IRF3-220ENST00000598108 SOSTQ9BQB4 213 aa17.61■□□□□ 0.41
IRF3-220ENST00000598108 MCRIP2Q9BUT9 160 aaKnown RBP17.61■□□□□ 0.41
IRF3-220ENST00000598108 HRASLSQ9HDD0 168 aa17.61■□□□□ 0.41
IRF3-220ENST00000598108 AURKAIP1Q9NWT8 199 aaPredicted RBP17.61■□□□□ 0.41
IRF3-220ENST00000598108 COA4Q9NYJ1 87 aa17.61■□□□□ 0.41
IRF3-220ENST00000598108 IGHV4OR15-8A0A075B7B6 117 aa17.6■□□□□ 0.41
IRF3-220ENST00000598108 A0A087WW49 117 aa17.6■□□□□ 0.41
IRF3-220ENST00000598108 MPPED1O15442 326 aa17.6■□□□□ 0.41
IRF3-220ENST00000598108 PRH1P02810 166 aa17.6■□□□□ 0.41
IRF3-220ENST00000598108 OR8U8P0C7N1 319 aa17.6■□□□□ 0.41
IRF3-220ENST00000598108 TBPP20226 339 aa17.6■□□□□ 0.41
IRF3-220ENST00000598108 MAS1LP35410 378 aa17.6■□□□□ 0.41
IRF3-220ENST00000598108 LPAR6P43657 344 aa17.6■□□□□ 0.41
IRF3-220ENST00000598108 RPL8P62917 257 aaKnown RBP17.6■□□□□ 0.41
IRF3-220ENST00000598108 MRPS10P82664 201 aaKnown RBP17.6■□□□□ 0.41
IRF3-220ENST00000598108 SLC38A6Q8IZM9 456 aa17.6■□□□□ 0.41
IRF3-220ENST00000598108 OR4A5Q8NH83 315 aa17.6■□□□□ 0.41
IRF3-220ENST00000598108 SMIM4Q8WVI0 70 aa17.6■□□□□ 0.41
IRF3-220ENST00000598108 DCUN1D4Q92564 292 aa17.6■□□□□ 0.41
IRF3-220ENST00000598108 DPF1Q92782 380 aa17.6■□□□□ 0.41
IRF3-220ENST00000598108 AIFM2Q9BRQ8 373 aa17.6■□□□□ 0.41
IRF3-220ENST00000598108 CGB1A6NKQ9 187 aa17.59■□□□□ 0.41
IRF3-220ENST00000598108 UPK2O00526 184 aa17.59■□□□□ 0.41
IRF3-220ENST00000598108 CTDSPLO15194 276 aa17.59■□□□□ 0.41
IRF3-220ENST00000598108 HLA-GP17693 338 aa17.59■□□□□ 0.41
IRF3-220ENST00000598108 RPL27AP46776 148 aaKnown RBP17.59■□□□□ 0.41
IRF3-220ENST00000598108 SLURP1P55000 103 aa17.59■□□□□ 0.41
IRF3-220ENST00000598108 TAS2R19P59542 299 aa17.59■□□□□ 0.41
IRF3-220ENST00000598108 EGFEM1PQ0D2K5 195 aa17.59■□□□□ 0.41
IRF3-220ENST00000598108 TBC1D26Q86UD7 250 aa17.59■□□□□ 0.41
IRF3-220ENST00000598108 TTC9CQ8N5M4 171 aa17.59■□□□□ 0.41
IRF3-220ENST00000598108 FYTTD1Q96QD9 318 aaKnown RBP17.59■□□□□ 0.41
IRF3-220ENST00000598108 TMEM140Q9NV12 185 aa17.59■□□□□ 0.41
IRF3-220ENST00000598108 COMMD9Q9P000 198 aa17.59■□□□□ 0.41
IRF3-220ENST00000598108 RSL24D1Q9UHA3 163 aaKnown RBP17.59■□□□□ 0.41
IRF3-220ENST00000598108 C13orf42A0A1B0GVH6 325 aa17.58■□□□□ 0.4
IRF3-220ENST00000598108 LINC01619G3V211 115 aa17.58■□□□□ 0.4
IRF3-220ENST00000598108 RAB3DO95716 219 aa17.58■□□□□ 0.4
IRF3-220ENST00000598108 HSPB1P04792 205 aaKnown RBP17.58■□□□□ 0.4
IRF3-220ENST00000598108 ZNF735P0CB33 412 aa17.58■□□□□ 0.4
IRF3-220ENST00000598108 PI3P19957 117 aa17.58■□□□□ 0.4
IRF3-220ENST00000598108 ZNF45Q02386 682 aa17.58■□□□□ 0.4
IRF3-220ENST00000598108 SSBP1Q04837 148 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms